Aliarcobacter butzleri ED-1: ABED_1890
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Entry
ABED_1890 CDS
T01823
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
abt
Aliarcobacter butzleri ED-1
Brite
KEGG Orthology (KO) [BR:
abt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
abt03016
]
ABED_1890
Enzymes [BR:
abt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ABED_1890
Transfer RNA biogenesis [BR:
abt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ABED_1890
Prokaryotic type
ABED_1890
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
Motif
Other DBs
NCBI-ProteinID:
BAK71607
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All DBs
Position
complement(1964964..1965821)
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AA seq
285 aa
AA seq
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MQVRFYEKEQLNKLLVVNKPIFMSSNFYLNRIKRKYKNKKAGFSGTLDPFAKGCLIVAFG
QYAKLFKYLSKTPKTYKAVIWLGVESESFDIEQIKRIELVNEINKEKILNELNLLKGEIE
YIPPKFSAKKIDGKRAYELARNGVEVELNKTKMMIFDTKFVLYNHPFITFEVTVSEGTYV
RSFAQILLEKLNSFGTLSYLERLNEGEFFYENEKELNPLDFIKLPVNKYLGTAEWLEKGK
KIGIEYVEKKDNGKYLILTEKFFSIIEIVDNDIKYLINKVPKYGI
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
ttgcaagtaagattttatgaaaaagaacaattaaataaattgttagtagtgaataaacct
atattcatgagttcaaatttttatttgaacagaataaaaagaaaatataaaaataaaaaa
gctggatttagtggaacacttgacccttttgcaaaaggttgtttgattgttgcttttgga
caatatgcaaagctttttaaatatttatcaaaaactccaaaaacatataaagcagtaatt
tggcttggtgttgaatcagaatcttttgatattgaacaaataaaaagaatagaattagtt
aatgaaataaataaagaaaaaattttaaatgaattaaatctgctaaaaggagaaatagaa
tatattcctccaaaatttagtgcaaaaaaaattgatggaaaaagagcttatgaattagca
aggaatggagttgaagttgaactaaataaaacaaaaatgatgatttttgatacgaaattt
gttttatataatcatccatttataacttttgaagtaactgttagcgaaggaacttacgtt
agatcttttgcacaaatacttttagaaaaattaaatagttttggaactttatcttatctt
gaacgattaaatgaaggtgaatttttttatgaaaatgaaaaagaattaaacccattagat
tttataaaattgcctgtaaataaatatttgggtacagctgaatggttagaaaaaggtaaa
aagataggaattgagtatgttgaaaagaaagataatggaaaatatcttatattaactgaa
aagtttttttctattattgaaatagtagataatgatataaaatatttaataaataaagta
ccaaaatatggaatataa
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