Aliarcobacter butzleri ED-1: ABED_1912
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Entry
ABED_1912 CDS
T01823
Name
(GenBank) tRNA pseudouridine synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
abt
Aliarcobacter butzleri ED-1
Brite
KEGG Orthology (KO) [BR:
abt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
abt03016
]
ABED_1912
Enzymes [BR:
abt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
ABED_1912
Transfer RNA biogenesis [BR:
abt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ABED_1912
Prokaryotic type
ABED_1912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
SCRE
Mistic
DUF1016_N
Motif
Other DBs
NCBI-ProteinID:
BAK71629
LinkDB
All DBs
Position
1988915..1989913
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AA seq
332 aa
AA seq
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MIKRFYPSNDKTLNFKFIQNEEDFIVEEQPIKFSLSGNFLVLKIKKTNCDTWELIDRIAK
FLNVYSNEIGYAGLKDKRATTTQYITIPKKYSKEIKNFRSKKIEILETFLHNEKLNIGDL
EGNRFKINLYDVEISDINHIQKIIKIISKNGMPNYFGYQRFGKEVVDNIEKAKNVVYGKE
IIKDKKLSKMLVSAYQSSFFNAWLVERLKLSKDEFKLLDGDVFLDLEKNKFFTPKTITEK
IIKDFKDEKIIPTGLLPGRNVFKAMNEASKIESKYDDSYIQEKGYRREAIVFPKNILCKY
DASKKVCSLDFVLQKGSYATVFVEFLANRNFS
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
ttgataaagagattttatccatcaaatgataaaactctaaactttaaatttatccagaac
gaagaggattttatagttgaagaacaaccaataaaattctctttatctggtaacttctta
gtcttaaaaataaaaaaaacaaactgtgatacttgggaacttatagatagaattgcaaaa
tttcttaacgtgtattcaaatgaaattggttatgcaggattaaaagataaaagagcaact
actactcaatatataactattcctaaaaaatactcaaaagagataaaaaatttcagaagt
aaaaaaatagagattttagaaacttttttacataatgaaaagctaaatattggtgattta
gaaggaaatagatttaagataaatctttacgatgttgaaatttctgatattaatcatatt
caaaaaattatcaaaataatatctaaaaatggaatgccaaactattttggttatcaaaga
tttggaaaagaagttgtagataatattgaaaaagcaaaaaatgttgtttatggtaaagag
ataataaaagataagaaattatctaagatgttagtttcagcttaccaaagtagctttttt
aatgcttggttagttgaaagactaaaactatctaaagatgaatttaaacttttagatgga
gatgtttttttagatttagaaaaaaacaaatttttcactccaaaaacaatcactgaaaaa
atcattaaagattttaaagatgaaaaaatcattccaacaggattacttccaggaagaaat
gtatttaaagcaatgaacgaagcttcaaaaatcgaatcaaaatatgatgattcatatatt
caagaaaaaggatatagaagagaagcaattgttttcccaaaaaatattttatgtaaatat
gatgcttcaaaaaaagtttgtagtttagattttgttttacaaaaaggatcttatgcgact
gtttttgtagagtttttagcgaataggaatttttcttaa
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