Aliarcobacter butzleri ED-1: ABED_1942
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Entry
ABED_1942 CDS
T01823
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
abt
Aliarcobacter butzleri ED-1
Pathway
abt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
abt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABED_1942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abt03400
]
ABED_1942
Enzymes [BR:
abt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
ABED_1942
DNA repair and recombination proteins [BR:
abt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ABED_1942
Prokaryotic type
ABED_1942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BAK71659
LinkDB
All DBs
Position
complement(2015081..2015728)
Genome browser
AA seq
215 aa
AA seq
DB search
MTWKDIIENEQQKPYYGKLKEEIDKRYENSIVFPEKQNIFKAFSLTPIDNLKVVILGQDP
YHGFGQAQGLSFSTPNNIKNPPSMVNILKEINDDLGKKSVCEDGDLTPWAKQGIMLLNTI
LTVEQGLAKSHHNLGWEIFTDNIIKYISDNKENVIFLLWGSPAISKTKLIDKNKHFILTA
PHPSPLSVYRGFYGCKHFSKTNEILKKLNKEEIIW
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgacttggaaagatattattgaaaatgaacagcaaaaaccatattatggaaaattgaaa
gaagagatagataaaagatatgaaaatagtatagtttttccagaaaaacaaaatattttt
aaagcgttttctttgacaccaattgataatttaaaagttgtcattttaggacaagatcct
tatcatggatttggacaagcgcaagggttatctttttcaactccaaataatataaaaaat
ccaccttcaatggtaaatattttaaaagagataaatgatgatttaggaaaaaaatctgtt
tgtgaagatggtgacttaactccttgggcaaaacaaggcataatgttattaaatacaatc
ctaactgtcgagcaaggtttagcaaaatctcatcacaatttaggttgggaaatttttacg
gataatataatcaaatatattagtgacaataaagaaaatgtaatttttttactttgggga
agtcctgctatatcaaagacaaaattgatagataaaaataagcattttattttaacagca
ccacatccaagtcctctttcagtttatagaggtttttatggttgtaaacacttttcaaaa
acaaatgagattttaaaaaaactaaataaagaagaaataatttggtaa
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