Aliarcobacter butzleri ED-1: ABED_2020
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Entry
ABED_2020 CDS
T01823
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification protein
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
abt
Aliarcobacter butzleri ED-1
Brite
KEGG Orthology (KO) [BR:
abt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
abt03016
]
ABED_2020
03036 Chromosome and associated proteins [BR:
abt03036
]
ABED_2020
Transfer RNA biogenesis [BR:
abt03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
ABED_2020
Prokaryotic type
ABED_2020
Chromosome and associated proteins [BR:
abt03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
ABED_2020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
SAM_GIDA_C
GIDA_C_1st
FAD_oxidored
Pyr_redox_2
FAD_binding_2
Pyr_redox_3
HI0933_like
DUF1157
Pyr_redox
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
BAK71737
LinkDB
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Position
complement(2104080..2105957)
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AA seq
625 aa
AA seq
DB search
MNYDVIVVGGGHAGIEASLASARMGKKTLLITMLVEQIGAASCNPAIGGLAKGHLVRELD
AIGGEMGLCTDNTGIQFRILNASKGAAVQGSRAQIDMDKYREYMRKVCHNTPNLEVYQDE
VTALLVKNDNEVCGVKTKLTEEFIAKKVVLTTGTFMRGLVHIGENKYEAGRAWELPSTTL
STQLKELGLRVGRLKTGTPSRLDANSIDFSVMDMHGGDVNPAPFSFRTNKSDFAPSQFPC
YITYTNEKTHEIISSNFYRAPLFTGQIEGLGPRYCPSIEDKVNRFAERDRHQLFLEPQTA
MCTEYYINGMSSSLPIDVQKAMIHSVKGLENAKIIRYGYAIEYDYVDPTELKHTLETKKI
KNLYHAGQINATTGYEEAAAQGLIAGINACLSIDEKEPFILRRDEAYIGVLIDDLVTKGT
NEPYRMFTSRAEYRLLLREENADLRLSQYGHKFGLIDDETIKKVENKRKTIEEAIEFMAN
EWMTSKKETLELLESIGEEKINDRVLLVDLIGRNSIDIFKFEKLVPSFAHLDNYLKEQII
IESKYYRYIQKQQKQIEKMKKMLKATIPESFSYKGLPGLSNEVVEKLEKHRPPTIFNASL
ISGVTPAALDIIHLNLNIFVKSNKD
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgaattatgatgtaattgttgtaggtggtggacatgctggaattgaagcatcacttgca
agtgcaagaatgggcaaaaaaactctattaattacgatgttagtagagcaaataggagca
gcaagttgtaaccctgcaattggaggtttagcaaaaggacatttagttagagaacttgat
gctatcggtggagaaatggggctttgtactgataatacaggaattcaatttagaatttta
aatgcttctaaaggagcagctgttcaaggaagtcgagctcaaattgatatggataaatat
agagaatatatgagaaaagtttgtcataatactcctaatttagaagtttatcaagatgaa
gttactgcacttttagtaaaaaatgataatgaagtttgtggagtaaaaacaaaattaact
gaagaatttattgcaaaaaaagttgttttaactacgggtacatttatgagaggacttgtt
catataggtgaaaataaatatgaagctggtcgtgcttgggaattaccttcaacaacttta
tcaactcagctaaaagagttagggttaagagttggaagattaaaaacaggaacaccttct
cgtcttgatgctaactctattgatttttcagtaatggatatgcatggaggtgatgtaaat
cctgctccgttttcatttagaactaataagtcagattttgctccatcacaatttccatgt
tatataacttacacgaacgaaaaaactcacgaaataatatcttcaaatttttatagagca
ccactttttacaggtcaaattgaaggcttgggacctagatattgtccaagtattgaagat
aaagtaaatagatttgctgagcgtgatagacatcaattattcttagaaccacaaactgca
atgtgtacagaatactatataaatggtatgtcaagttctcttccaattgacgtacaaaaa
gctatgattcattctgtaaaaggtttagaaaatgcaaagattattagatatggatatgct
attgaatatgattatgttgatccgactgaattaaaacatactcttgaaactaaaaaaatt
aaaaatttatatcatgcagggcaaatcaatgctacaacaggttatgaagaagcagcagct
caagggttaattgctggaataaatgcttgtttatcaatagatgaaaaagagccttttatt
cttagacgtgatgaagcttatattggagttttaatcgacgatttagtaacaaaaggtaca
aatgaaccatatagaatgtttacaagtagggctgaatatagacttcttttgagagaagaa
aatgctgatttaagattaagtcaatatggacacaagtttggtttgatagatgatgaaact
ataaaaaaagttgaaaacaaaagaaaaaccattgaagaagctattgaatttatggcaaat
gaatggatgacttctaaaaaagagactttagaacttcttgaaagtattggtgaagagaaa
atcaatgacagagttttacttgtagatttgattggaagaaatagtattgatattttcaaa
tttgaaaaacttgttccaagttttgcacaccttgataattatttaaaagaacagataatt
attgaatcaaaatattatagatatattcaaaaacaacaaaaacaaatagaaaaaatgaaa
aaaatgctaaaagcaactattcctgaaagttttagttataaaggacttcctggtctttca
aatgaagttgtagaaaagcttgaaaaacatagaccccctacgatttttaatgctagcctt
atatcaggtgttacacctgctgctcttgatattatacatttgaacttaaatatatttgtc
aaaagcaataaagattga
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