Aliarcobacter butzleri ED-1: ABED_2073
Help
Entry
ABED_2073 CDS
T01823
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
abt
Aliarcobacter butzleri ED-1
Pathway
abt03030
DNA replication
abt03430
Mismatch repair
abt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABED_2073
03430 Mismatch repair
ABED_2073
03440 Homologous recombination
ABED_2073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abt03032
]
ABED_2073
03400 DNA repair and recombination proteins [BR:
abt03400
]
ABED_2073
Enzymes [BR:
abt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABED_2073
DNA replication proteins [BR:
abt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABED_2073
DNA repair and recombination proteins [BR:
abt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABED_2073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
eIF-5_eIF-2B
Motif
Other DBs
NCBI-ProteinID:
BAK71790
LinkDB
All DBs
Position
2159458..2163021
Genome browser
AA seq
1187 aa
AA seq
DB search
MSQIPQFTHLHLHTEYSLLDGANKIKPLAKKLKKLGMTSVAMTDHGNMFGAIAFYNAMRD
EGIKPIIGMEAYIHNSEDISDKTNRQRYHLCLYAKNEIGYKNLMYLSSQAYINGFYYYPR
INKKILKENSEGLVCSAACLQGEINWHLNTQSERNVKFGAKGYEEAKKIALEYKEIFGDD
FYLEIMRHGISDQLFVDDQILKLSKETGIKVVATNDTHYLEQKDADAHEAFMCIAMNKLY
DDPNRLRHSVHEFYLKSPEQIAKLYSDIPEAIEATQEIADKCNLTIKLGNPTPPNFKFTR
QKSQEAGLTLPEPDNEYSLENDKILFMHECRIGLEDRLKIVPAEHHQEYRDRLEVEIEII
NNMKFPGYMLIVWDFVIVAKRMGIPVGPGRGSAAGSLVAFSLKITDIDPIPYGLLFERFL
NPERVSMPDIDMDFCQSRRGEIIDYVVQQYGRANVAQIITFGKLLAKGVIRDVARVLDMP
YSKADAMAKLIPDELGIDLKNSWEKEPKIKELCEADPQAARVWEYALALEGLNRNAGTHA
AGVVISNEPLWKKTPLFKPSGLDTLATQYNGKYIEDVDLIKFDFLGLKTLTVIEEANKLI
EQRHGKRVNFITTDVNDKGVYDLIQTGNTIGLFQIESDGMQDLCKRLKPSNFEDIIAVLA
LYRPGPMESGMLDDFIERKHGRAKIDYFHDELESALKPILENTYGVIVYQEQVMQIVQSV
GGFSLGGADLVRRAMGKKIKEEMDRLKGEFADGAQNKGYTRAYAEELFDLIVKFAGYGFN
KSHSAAYALVTFYTSYLKCYYPAEFMAALLTLEKDNTDKVVKYVDETKRLGLELFPPDIN
KSDLVFSAKKIDGKEVVMFGMGAIKGAGDVAINAILNARGNAPFKDLPDFISRIDGSKVN
KRVIESLTKAGAFDSFGYTRKSLLNQIEKIVDTVGKAATAKKMMTGSLFGDSEELTKIDI
ELEHLNEFDPKELLEFEKATLGFYVSGHPLDEYKKDLEKINFTLSSQIDELEDGSQALFV
GKIESITEKTSKKGNKFGIVSILDFHGTIEFMLFEDKLKELQDEYNHEEPIAFKVRISKN
ESFTRISVLKIETIFDAQKEKLKIKQKEVQEPPLNIAIAFSEDENIMYKLFDIIANNQGK
RELKLIIKSKLADLELETGFKVTSNVENLIKQLEGVYLVDEAYTTDK
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaattccacaatttacccatctacatttacatactgaatattcattacttgat
ggtgcaaataaaataaaacctctagcaaaaaaattaaaaaaacttggaatgacaagtgta
gcaatgacagaccatggaaatatgtttggagcgattgctttttataatgccatgagagat
gaaggaataaaaccaatcattggaatggaagcatatattcacaatagtgaagatataagt
gataaaacaaatagacaaagatatcacttatgtttatatgcaaaaaatgaaattggctac
aaaaaccttatgtatctaagttctcaagcgtatataaatggtttttactattatcctaga
attaataaaaaaattttaaaagaaaattctgaaggtttagtttgtagtgcagcttgttta
caaggtgaaataaattggcatctaaatacacaaagtgaaagaaatgtaaaatttggtgca
aaaggttatgaagaggcaaaaaaaattgcacttgaatataaagagatttttggtgacgat
ttttatttagaaattatgcgtcatggaatatctgaccaactttttgttgatgatcaaatt
ttgaaactttcaaaagagacaggaataaaagtagttgctacaaatgatactcactattta
gaacaaaaagatgcagatgcacacgaagcatttatgtgtattgcaatgaataaactttat
gatgacccaaatagattaagacatagtgttcatgaattttatctgaaatccccagaacaa
atagcaaaattatattctgatattccagaagccatagaagcgactcaagaaatagctgat
aaatgtaatctaactataaaactagggaatccaactcctccaaattttaaatttacaaga
caaaaatcacaagaagctggtttgactttacctgagccagacaatgaatattcacttgaa
aatgacaaaattttatttatgcacgaatgccgaataggattagaagataggttaaaaatt
gttccagctgaacatcatcaagaatatagagatagacttgaagttgaaattgaaattata
aataatatgaaattcccaggatatatgttaatcgtttgggatttcgtaattgttgcaaaa
agaatgggaattccagttggtccaggacggggttcggctgctggaagtttagttgcattt
tctttaaaaatcacagatattgaccctattccttatggtttactttttgagaggtttcta
aatccagaaagggtttcaatgcccgatattgatatggacttttgtcaaagtagaagagga
gaaattattgattatgttgttcaacagtatggtcgtgctaacgttgctcaaattatcact
tttggtaaacttttagcaaaaggagttattagagacgttgcaagagttcttgatatgcca
tattcaaaagcagatgcaatggcaaaattaattcctgacgaattaggaatagatttaaaa
aattcttgggaaaaagaaccaaaaataaaagaactttgtgaagcagatccacaagctgca
agggtttgggaatatgccttagcgttagaaggattaaatagaaatgctggaactcatgca
gctggagttgtaatttcaaatgaacctttatggaaaaaaacaccactttttaaaccaagt
ggtcttgatactttggcaacacaatacaatggaaaatatattgaggatgtagacttaatt
aaatttgactttcttggacttaaaactttaactgttattgaagaagcaaataaattaatc
gaacaacgacatggaaaacgagtaaatttcatcacaacagatgtaaatgacaaaggtgtt
tacgacctaattcaaacaggaaatacgattggattatttcaaatagagtctgatggtatg
caagatttatgtaaaagattaaaaccatcaaattttgaggatatcatcgccgttcttgca
ctttatagaccaggacctatggaatcaggaatgcttgatgattttatcgaaagaaagcac
ggtcgtgcaaaaattgactatttccatgatgaacttgaatctgcattaaaaccaattctt
gagaatacttatggagttatcgtttatcaagagcaagttatgcaaattgttcaaagcgta
ggaggtttttcacttggaggagccgatcttgttagacgggcaatgggtaaaaaaatcaaa
gaagagatggatagattaaaaggtgaatttgcagatggtgcacaaaataaaggttataca
agagcttatgcagaagaactttttgatttaattgtaaaatttgctggatatggatttaat
aaatctcactcagctgcttatgcacttgtaacattttatacttcttatttaaaatgctat
tatccagcagaatttatggccgcattattaacacttgaaaaagataatactgataaagtt
gtaaaatatgttgatgaaacaaaaaggttaggattagaactttttccaccagatataaat
aaatcagatttagtattttctgcaaaaaaaatagatggtaaagaagttgttatgtttgga
atgggtgcaattaaaggtgctggtgatgttgcaataaatgctattttgaatgcaagagga
aatgctccatttaaagacttaccagattttatatcaagaattgatggaagtaaagtaaat
aaaagagttatagaatctttaacaaaagctggtgcatttgatagttttggttatacaaga
aaatctttattaaaccaaatagaaaagatagttgatacagttggaaaagcagcaacagct
aaaaaaatgatgacaggttcactttttggagatagtgaagaactaacaaaaatagatatt
gaattagagcatctaaatgaatttgatcctaaagaacttttagaattcgaaaaagctact
ttaggtttttatgtttcaggacacccacttgatgagtataaaaaagatttagaaaaaata
aactttactttatcttctcaaattgatgaacttgaagatggaagccaagcactttttgta
ggaaaaattgaatcaattacagaaaaaacttcaaaaaaaggaaataaatttggaattgtt
tctattttagattttcatggaacaatcgagtttatgctttttgaagataaattaaaagag
cttcaagatgaatacaatcatgaagaaccaattgcatttaaagtaagaatttctaaaaat
gaaagttttacaagaattagtgttttaaaaatagaaactatatttgatgcacaaaaagaa
aaattaaaaataaaacaaaaagaagttcaagagccacctttaaatattgctattgctttt
agtgaagatgaaaatattatgtataaattatttgatattattgccaataatcaaggaaaa
agagaactaaaacttataattaaatcaaaattagcagatttagaacttgaaacaggtttt
aaagtaacttcaaatgtagaaaatttaataaaacaattagaaggagtttatttagtcgat
gaagcatatactactgacaaatga
DBGET
integrated database retrieval system
