Aliarcobacter butzleri RM4018: Abu_0484
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Entry
Abu_0484 CDS
T00600
Symbol
trmU1
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
abu
Aliarcobacter butzleri RM4018
Pathway
abu04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
abu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
Abu_0484 (trmU1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
abu03016
]
Abu_0484 (trmU1)
Enzymes [BR:
abu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
Abu_0484 (trmU1)
Transfer RNA biogenesis [BR:
abu03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
Abu_0484 (trmU1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
QueC
ThiI
ATP_bind_3
NAD_synthase
PAPS_reduct
Arginosuc_synth
DUF7411
DUF3659
Asn_synthase
Motif
Other DBs
NCBI-ProteinID:
ABV66759
UniProt:
A8ES35
LinkDB
All DBs
Position
complement(492280..493317)
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AA seq
345 aa
AA seq
DB search
MSKKKVMVGMSGGIDSSVTAYMLQNEGYEVEGIYLKLHNRTDGYHEKNLGYIEDVAKFLN
IKYYILDLADKFSKEVYDYFVDSYLTGTTPNPCVKCNRQIKFGAMLDFAKQHGASYLATG
HYAKTDGKFFYEADDKTKDQSYFLSQVDKDALKYMMFPLSTYKKEDIVKFGAKLDVAYKK
ITEKSESQEICFVETVYTDVVKKHANIDQEGDVLDENGKVVGKHKGFAHYTIGKRRGFTV
KGAQEPHFVTKLNPKDNTIVVGKKEALEVNEVVGNNLNMFIDDTKFSCNVKLRYRSVSTP
CEVQIKDEKAYITLKEPVYGVAKGQLAVFYHEEKVIGSAWIESTK
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaaaaaaagtaatggttggaatgagtgggggaattgattcttcagttactgct
tatatgttacaaaatgaaggatatgaagttgaaggaatttatctaaaacttcataatcga
actgacggttaccatgaaaaaaatttaggttatattgaagatgtagctaaatttttaaat
atcaaatactatatattagacttagctgataagttttcaaaagaagtttatgactatttt
gttgattcttatctaactggaacaactccaaatccatgtgtaaaatgcaatcgtcaaata
aaatttggagctatgcttgattttgcaaaacaacatggagcttcatatttagcaactgga
cattacgcaaaaactgatggtaagtttttttatgaagctgatgataaaacaaaagaccaa
agctattttttatcacaagtagataaagatgccctaaaatatatgatgtttcctttaagt
acttataaaaaagaagatattgtaaaatttggtgcaaagcttgatgttgcttacaaaaaa
attactgaaaaaagtgaatctcaagaaatctgttttgttgagacagtttacactgatgtt
gtaaaaaaacatgcaaacattgaccaagaaggtgatgttttagatgaaaatggaaaagtt
gttggaaaacataaaggttttgcacactatacaattggaaaaagaagaggatttacagtt
aaaggtgctcaagagccacactttgttacaaaactaaatccaaaagataatactattgtt
gttggtaaaaaagaagctttagaagtaaatgaagttgttggaaataatctaaatatgttt
attgatgatactaaattttcatgtaatgtaaaactaagatatcgttcagtttcaacacct
tgtgaagtgcaaataaaagatgaaaaagcttatatcactttaaaagaaccagtttatgga
gttgcaaaggggcaacttgctgttttttatcatgaagagaaagtaattggaagtgcttgg
atagagagtaccaagtag
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