Aliarcobacter butzleri RM4018: Abu_0563
Help
Entry
Abu_0563 CDS
T00600
Symbol
rep
Name
(GenBank) ATP-dependent DNA helicase, UvrD/Rep family
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
abu
Aliarcobacter butzleri RM4018
Pathway
abu03420
Nucleotide excision repair
abu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
abu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Abu_0563 (rep)
03430 Mismatch repair
Abu_0563 (rep)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abu03400
]
Abu_0563 (rep)
Enzymes [BR:
abu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Abu_0563 (rep)
DNA repair and recombination proteins [BR:
abu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Abu_0563 (rep)
MMR (mismatch excision repair)
Other MMR factors
Abu_0563 (rep)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
AAA_30
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
ABV66830
UniProt:
A8ESA6
LinkDB
All DBs
Position
566755..568800
Genome browser
AA seq
681 aa
AA seq
DB search
MPLSNLNQEQLQAATCHQGFNLIIASAGTGKTSTIVGRIAYLLNSGINPKEILLLTFTNK
AAAEMINRVAKFFGKDIAKEIMAGTFHSVSYKLLKELNVNITLKQPNELKTLFKSIYEKR
VFFDRSDEVSPYDGGYLYDMYSLYLNSNDGEDFASWIVSKNSSHEIYTLIYEDVVDEFNE
LKTKYGYVNFDDLLTTMLKILKEKDFDFKEILVDEYQDTNPLQGRLLDSFRPKSLFCVGD
YDQSIYAFNGSDIGIISTFSTRYKDANVFTLRKNYRSTKPILDLATKVIEFNERVYEKKL
EVVRKEDIYKPKLLAFNELFSQYEYISELISKSQTPHSEIAIIYRNNSSADGIEANLREF
GIAAKRKGGMSFFDSVEVKFILDILVMQVSHNDMMAFIHIVEHGKGIGKAIAKDIFDALI
KLGDGDIIRGLFQPRIDISNPYETKVKNQQLGLFDDFIELGSISKFKDCNFEETFLSNPI
LKHPKLSVDGGKYLYDIYLLLKHLRRTKIPETLVASISSSMAYSKLKDFLATKRATQKDG
TINDIQKTKALAKINRKAMLLKNLARNFNDLSKFINSMILGGSEMSEGEGVNLLSIHASK
GLEFKEVYVIDLMDGRFPNRKLMSKGGSLEEERRLFYVAVTRAKDILYLSYAKYDKIKKM
TFVASPFLKEAGMAINEEEDS
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgcctttatcaaatttaaatcaagaacaattacaagcagcaacttgccatcaaggattt
aatctaataattgcgagtgcaggaacaggaaaaacttcaacaattgttggaagaattgct
tatttattaaatagtgggataaatccaaaagagattttacttttaactttcacaaataaa
gcagcagcagagatgataaatagagttgctaaattttttggaaaagatatagcaaaagag
attatggcaggaacttttcactctgtttcatataaacttctaaaagaactaaatgtaaat
attactttaaaacaaccaaatgaactaaaaacacttttcaaatcaatttatgaaaaaaga
gttttttttgatagaagtgatgaggtttcaccttatgatggtggatatttatatgatatg
tactctttatatttaaattcaaatgatggagaagattttgcttcttggatagtatcaaaa
aactcttctcatgaaatatatactttgatttatgaagatgttgttgatgaatttaacgaa
ctaaaaacaaaatatggttatgtaaattttgatgatttacttacaactatgcttaaaatt
ttaaaagagaaagattttgattttaaagagatacttgttgatgagtaccaagatacaaat
cctcttcaaggaagacttcttgattcttttagaccaaaatcacttttttgtgttggagat
tatgaccaaagtatttatgcttttaatggctctgatataggaataatctctacattctca
acaagatacaaagatgcaaatgtttttactttaagaaaaaactatcgttcaacaaaacct
attttggatttagcaacaaaagttatagagtttaatgaaagagtttatgaaaaaaaactc
gaagttgtaagaaaagaagatatttataaaccaaaacttttggcttttaatgaacttttt
tcacaatatgaatatatttcagagcttatttcaaaaagtcaaacacctcatagtgaaata
gcaataatatacagaaacaactcaagtgcagatggaatagaagcaaatttaagagaattt
ggaattgctgctaaaagaaaaggtggaatgagtttttttgactcagttgaagtaaaattt
atacttgatattttagtgatgcaagtttctcacaatgatatgatggcatttattcatata
gttgaacatggaaaaggaataggaaaagctattgcaaaagatatttttgatgctttaatt
aaacttggtgatggagatattataagaggattatttcaacctagaattgatatctcaaat
ccttatgaaacaaaagtaaaaaatcaacaattagggctttttgatgattttatagagtta
ggttcaatttcaaaatttaaagattgtaactttgaagagacatttttaagtaatcctata
ttaaaacatccaaagttaagcgttgatggtggaaaatatctttatgatatttatttactt
ttaaaacatttaagaagaacaaaaattcctgaaacattagttgcaagtatatcttcttcg
atggcatattcaaaactaaaagattttttagcaacaaaaagagcaacacaaaaagatgga
acaataaacgatattcaaaaaacaaaagcattagcaaaaataaatagaaaagcgatgctt
ttaaaaaatctagcaagaaattttaatgatttatcgaagtttataaactctatgatttta
ggtggaagcgaaatgagtgaaggtgagggtgtaaatctactttctattcacgcaagtaaa
ggtttagagtttaaagaagtttatgtaatagatttgatggatggaagatttccaaataga
aaacttatgagtaaaggtggaagcttagaagaagaacgaaggcttttttatgttgcagtg
acgcgtgcgaaagatattttgtatttatcttatgcaaaatatgacaaaataaaaaagatg
acatttgtagcaagtccctttttaaaagaagcaggaatggctataaatgaagaagaggat
tcttaa
DBGET
integrated database retrieval system
