Aliarcobacter butzleri RM4018: Abu_0940
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Entry
Abu_0940 CDS
T00600
Name
(GenBank) adhesin/haemagglutinin, HecA family
KO
K15125
filamentous hemagglutinin
Organism
abu
Aliarcobacter butzleri RM4018
Brite
KEGG Orthology (KO) [BR:
abu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
abu00536
]
Abu_0940
Glycosaminoglycan binding proteins [BR:
abu00536
]
Heparan sulfate / Heparin
Microbial pathogens
Abu_0940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPS
Fil_haemagg_2
FliJ
Motif
Other DBs
NCBI-ProteinID:
ABV67200
UniProt:
A8ETC6
LinkDB
All DBs
Position
938478..947579
Genome browser
AA seq
3033 aa
AA seq
DB search
MKIIKRIISIKISCLLVAQQSLIAGGLTVDKTAPSSNQANLESARNGVPIVNIVAPNQKG
LSHNKFSDYNVNKEGLILNNSNKREVNTQLSGYIYGNQNLKNGTAKTILNEVTSKNKSEL
KGFTEVAGDRANVVVANPNGIYINGAGFINTSRATITTGNPNIKNGEIDSFDVRQGQIDV
DGEGLNLSNVNKAELYAQTVKLNAKIHAQDLDVVTGQNSISKDGTITNIENSVDEKPTLS
IDSSALGGIYANKISLVGTQKGVGVNLPIEISAQDDFKLSADGKIVLDKVISEKSIDIKS
DSSDINTKTIYGNNVNIEAKNSIKNEDVIASKTNIDLKANNIENKDANIQAVKDITITSK
IIDNSKGTISSNNNLELDVFDFKGNNSTIQASNIDIKANDFEANSSNIVATNGNLDIKVN
NLDLDNSLQIGALDNVNIKSNEAKLNNTKIVSQKGNMSFDTNSLELEKSILSASKYLDIN
TTYLKNTQGNIQALEDINITSKDIDNQDGKIATNKNLLLNSSNFQGDNSKLQASNIDIKA
NNFEAKSLNIVAINGNLDINSNILNLDNSLQIASLKDINITSNQAKLNNSKILSQDGNIS
FDTNSLELNKSIVNASSNINIQSSNLKNKDGNIQAVKDINIASKDIDNENGVITTNENLT
INSSKDGFFNNIKGKLQSGKKLVLDIFNFQGDNSNIQASNIDIKANNFEAKNSNIVATNG
NSDIETDNFILEDSYLNIKNNLSLNSKNSLNLKDNTIVGNNLNISADEIYFDGTSQNKNI
LYSTNDILINTKKLISNYFFTQANNNINIDSSNIDLKNSKFQSVVFIDSIYQNGYKQGDI
NLTTSNLNLYNTTLASKDINIKKGTNQKLQTLAVENSSLDVNNNIDVSTTTLNAKKSLFS
ALNDLLLTTDKSIVFLNNNFSANNLSLTIDENLTLDKSNSFLANNNFSLNTKSLVNNAQI
ISNGKLTINTNDFIVNNALLSSKNILSLNATNYILNNDSNEPIFGIRGAITNLNTKLLTN
YGFITSLYDMNIKVDDLINYAGIASANSENKTSNMNIEANNLTNYNTIYSNDNINLYVKN
SLLNETNNSYVTGLDYARIYAKNNIAIAKDINHNYTNNITNKSAIIETQNGDINIWADTL
TNRRILDYTDDAFLKSSKVTDSIYFEEGKSYPNKGANGIINNFFITRGQDINLYALDSEF
SLLIDLAREPFSFHYATVEVSMDKKIQYDNPLYKASLINSGQNLNLNAKNINNQISTISA
VKDINFNTDNITNYYGSTYTTNISFKTYHEKEAFRDYESSQAYLIECSDSGICIYGSKQK
GTLRRGNTILKSTGGKVLGDYDYGTYTTTQKVELGGTILAGGSIKGVTKNLINGTVVESE
IPLVNIYSPTTNTSLKTANIQTDKKTVESKNIEEKNTSTIKVENKVLNSDEIKIKDSEKI
EESTIKIENKVLDKIVLNSIDENYILPTNKYSTFTTVNPNKNLDYLVESNPLYTNYSNFI
GSSYFLEKMSFQGDKTMKRLGDAAYETKLVSDAIFKQTGQRFLSQDYTSENTQFVSLMEN
AVNLSGVLGLELGKPLSKQQLVNLTEDIVWMEEKVVNGQTVLVPVVYLAKDYNKSQGAVI
SAKNIDLEIKDNLVNSGTIKTNDYLNLNANSITNNSGVILSGGKATLISNDDFINKNGGL
IKASDIQIASLNGSVINETYFKTKTIGSKGDSTTYTNVGKTSSIEATNGNLVIQAKNDIT
NIGANLGAKESILLQTQVGDINLNAIKEEHAYNAKLSGGFEKAQDIKYQTSNIDANNIIM
QSGKDINLEASKLNATNQINLNAQNDINIEALNNVYYRDKQSTKKGTFSKTTKRDMVYKE
SVNSAELNANDILINANNDVNLQAAKLKAQDNIIVNAKDGNLNIVAKEYREGELHEKSKS
SWGGLKKSLDISSTDALKLNSALIKTEASNVVLTSGKDINILASEINSGADIQLKALNDV
LIASQSEYLKTQEVHKKSSFNLAGLTSLVVPVDTTIYSSEIHKNDKLSSSSVASKLNANK
DILIDSGSTTIAGSNLEANNIGIKADTGEINILSSQDVQNATSLDKEIKLGLSDPIKGIV
QNTKNMFSGETKVKFEVGSLTYDEVDKASQTTKNNSSNLKAKENLVLDSLTDINVQGSNL
KAGENLVLNSKVGDINILNTTDTYNEDIKEKHAKASVNVTVQNEYVETAQAVKSAVKSAE
QLKQTKDDYSKYKGEVKKLESTLSDLKQRYKAKEVGIDYEDIEDLSDFIDNLKSQEKYYV
AAIAAATADLASKTAAIATQAGTAYASSGTLGFSAGISLDVNGEKSKQNINNQTSNASNL
NGKNIYINTDEKLSTNTNVVGSNVIADENLYINTNNLNVKASQDNYTSKNDSESINGSIA
FTMYGGGGGTAGLGYGKSNSSSDSFLNNNSQLSGNNVNINVKNDAVFQGANVRANDTLNL
NVGNNLVLESLRDEYSSNSKGFNVNAGIGFGSGGKEGHRTPSLDVGKQSSTNAGFSVNNG
VTQNKQTVLSSITGDKVNVNVGNNTHLKGSLLASGNYDENGVFQDDKNLNFITNTLTFGN
LSNSNYSSSKSLGANVNYNLENKKVENQKEKPQQKGISSVGYQAENSLSANASKTLATLG
QGNVTVKDVENSDELDRLNRDTTAVNKDLYSSSTGTKVDATLDTRLLTVEGREQIKKEYE
DMNKNMYIIAGTLPDANSDNPIEATVGEIWNGLTKYLTLGIVPSNENNGGILAQIPVLTG
VDDSQHKILQVVNKESTKYNEQDYIRFEDSSYYKSLSDEDKKLFDKQNLYVSKEPIIVTK
DTVTYQNSINGMMNNVGEAIKNGLQQTGQINTNSSPVELNVNYNPSYGFLGDVFESFVDK
SGIGTTGIAKQTGGFVYDTISARGSDGSNFAMHSQANAIVYNGIIYIQTTTGLKPMGNEI
DDTKTFVSFGSPMNGKDMEKLINKMGYEYSGAYTKSGDFVGESLGGNKGNNGQADILDRL
NILNAGKLFTNSSPHSTYICQDFGTNVKCGYKK
NT seq
9102 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattataaaaagaataatctcaattaaaataagttgtttattagtagctcaacaa
tctttaatagcaggtggtttaactgttgataaaactgctccaagctcaaatcaagcaaat
ttagaaagtgctagaaatggagttccaatagtaaatatagtagcaccaaatcaaaaaggt
ctttctcataataaatttagcgattataatgtaaataaagaaggcttaattttaaataac
tcaaataaaagagaagtaaatactcaactttcaggttatatctatggaaatcaaaatcta
aaaaatggtacagcaaaaacaattttaaatgaagttacaagtaaaaataaaagtgaacta
aaaggctttactgaagttgcaggagatagggcaaatgtagttgtagcaaatccaaatggt
atatatataaatggtgcaggatttatcaatacttcaagagcaactattacaacaggaaat
ccaaatataaaaaatggcgaaatagatagttttgatgtaagacaaggacaaatagatgtt
gatggtgaaggattaaacttatcaaatgtaaataaagctgaactatatgctcaaactgta
aaactaaatgccaaaattcatgcacaagatttagatgtagttactggacaaaatagtatt
tcaaaagatggaactataacaaatatagaaaattcagttgatgaaaaaccaactttatcg
atagattcttctgctttaggtgggatttatgcaaataaaataagtttagttggaacacaa
aaaggtgtaggagtaaatcttcctattgaaatatctgctcaagatgattttaaactaagt
gccgatgggaaaatagttttagataaagtaatctctgaaaaaagtatagatataaaatca
gattcaagtgatataaatactaaaacaatttatggaaataatgtaaatatagaggctaaa
aatagtataaaaaatgaagatgttatcgcttcaaaaacaaatatagatttaaaagcaaat
aacatagaaaacaaagatgcaaatattcaagcagtaaaagatataactattacttcaaaa
attatagataattcaaagggaacaatatcttcaaataacaatttagaattagatgtattt
gattttaaaggaaataactcaactattcaagcttcaaatatagatataaaagcaaatgat
tttgaagccaatagttcaaatattgtagcaactaatggaaacttagatataaaagtaaac
aatttagatttagataattctttgcaaattggtgccttagataatgtaaatataaaatca
aatgaagcgaaattaaataatacaaagatagtaagtcaaaaaggtaatatgtcttttgat
acaaattctttagaattagaaaaatcaatactaagtgcttcaaaatatttagatataaat
acaacttatttgaaaaatacacaaggtaatattcaagctttagaagatataaatatcaca
tcaaaagatatagataatcaagatggtaagatagcaacaaataaaaacttactattaaat
agttctaatttccaaggtgataactcgaaattacaagcttcaaatatagatataaaagca
aataattttgaagcaaaaagtttaaatatagtggcaataaatggaaatttagacataaac
tcaaatattttaaatttggataattctttacaaatagcaagtttaaaagatataaatatt
acttcaaatcaagcaaaattgaacaactcaaaaatattaagtcaagatggaaatatatct
tttgatacaaactctttggaattaaataaatcaatagtaaatgcttcaagtaacataaat
atacaatcaagtaatttaaagaataaagacggaaatatccaagcagtaaaagatataaat
attgcatcaaaagatatagataatgaaaatggtgtaataacaacaaatgaaaatctaaca
ataaattcttcaaaagatggatttttcaataacataaaagggaaattgcaatcaggtaaa
aaactagtattggatatatttaatttccaaggagataattcaaatattcaagcttcaaat
atagatataaaagcgaataattttgaagcaaaaaattcaaatatagtagcaacaaatgga
aattcggacatagaaacagataattttattttggaagattcatatttaaatattaaaaat
aatctaagtttaaactcaaaaaatagtttaaacttaaaagataatacaatagttggaaat
aacttaaatataagtgcagatgaaatatattttgatggaacaagccaaaataaaaatatt
ttatattcaactaatgatattttaataaatacaaaaaaacttatctcaaattattttttt
actcaagcaaataataatataaatatagactcttcaaatattgatttaaaaaatagtaag
tttcaaagtgtggtatttatagattctatatatcaaaatggatataaacaaggagatata
aacttaactacatcgaatttaaatttatacaatacaactttagcttctaaagatataaat
attaaaaaaggaactaatcaaaaacttcaaactttagcagtagaaaactcatctttggat
gtaaataacaatatagatgtatcaacaacaactttaaatgcaaaaaaatcactgttttct
gctctaaatgatttattattaactacagataaaagtatagtatttttgaacaataacttt
agtgctaataacttaagtctaactatagatgaaaatctaactttagataaatcaaatagt
tttttagcaaataataattttagtttgaatacaaaatctttagtaaataatgctcagatt
atttcaaatggaaaacttactattaatacaaatgattttatagtaaataatgctttatta
tcttcaaaaaatattttaagtttaaatgctacaaattatatattaaataatgattcaaat
gaaccaatatttggcataagaggagcaatcacaaacttaaatacaaaacttttaacaaac
tatggatttatcacttctttatatgatatgaatataaaagtagacgatttgataaattat
gctggaattgcatctgcaaatagtgaaaataaaacttcaaatatgaatatagaagcaaat
aatcttacaaactacaatactatttattcaaatgataatataaatctatatgtcaaaaat
agcctattaaatgaaacaaataatagttatgtaactggattagactatgcaagaatttat
gcaaaaaataatattgctatagcaaaagacattaatcataattatactaataatattaca
aataaatcagctattattgaaactcaaaatggtgatataaatatttgggcagatactctt
acaaatagaagaattttagactatactgatgatgcatttttgaaatcatcaaaagttacg
gatagtatatactttgaagaagggaaatcttatccaaataaaggagcaaatggtattatc
aataacttctttataacacgtggacaggacatcaacctttatgcacttgattcagaattt
tcactattaatagacttagcaagagaaccattttcttttcattatgctacagttgaagtt
tcaatggataaaaaaatacaatatgataatccactttataaagcatctttgataaattct
ggtcaaaatttaaatctaaatgctaaaaatataaataatcaaataagtacaattagtgca
gtaaaagatatcaattttaacacagacaatataactaactattatggtagtacatatact
acaaatatctcttttaaaacttaccatgaaaaagaagcttttagagattatgaatcttct
caagcttatttaatagaatgttctgattcaggaatttgtatttatggttctaaacaaaag
ggtactttaagaagaggaaatacgatattaaaaagtacaggaggaaaagtactaggtgat
tatgattatggtacttatacaactactcaaaaagttgaactcggaggaacaattttagca
ggtggaagtataaaaggagtgacaaaaaatttaataaatggaacagttgttgaaagtgaa
attcctcttgtaaatatctattctccaacaacaaatacaagcttaaaaacagcaaatatt
caaacagataaaaaaacagtagagagtaaaaatatagaagaaaaaaatacttcaactata
aaagtagaaaataaagtattaaattctgatgaaataaaaataaaagatagtgaaaaaata
gaagaatcaactataaaaatagaaaataaagtactagataaaatagtcttaaattcaata
gatgaaaactatattttaccaacaaataaatattctacattcacaacagtaaatccaaat
aaaaacttagattatctagtagaatcaaatcccttatatacaaactattcaaactttata
ggaagttcatattttttagaaaagatgagttttcaaggtgataaaactatgaaaaggtta
ggtgatgcagcttatgaaacaaaacttgtaagtgatgctatatttaaacaaactggacaa
agatttttaagtcaagattatacaagtgaaaatacgcagtttgtatcacttatggaaaat
gcggtaaatcttagtggagttttggggttagaacttggaaagccactttcaaaacaacaa
ttagtgaatcttacagaagatatagtatggatggaagaaaaagttgtaaatggacaaact
gtgcttgtaccagtagtatatttagcaaaagattataataaatctcaaggagcagtaata
tctgcaaaaaatatagatttagaaataaaagataatttagtaaatagtggaactataaaa
acaaatgattatttaaatctaaatgcaaatagtattacaaataattctggtgtaatactt
tctggtggaaaagcaacacttatatcaaatgatgattttataaataaaaatggaggattg
ataaaagcaagtgatattcaaatagcatctttaaatggaagtgttataaatgagacatat
tttaaaacaaaaacaataggttcaaaaggtgatagtacaacatatacaaatgtaggaaaa
acaagctctatagaagcaacaaatggaaatctagtaatccaagcaaagaatgatataact
aatataggagcaaatttaggagcgaaagaaagtatcttattacaaacacaagtaggtgac
ataaacttaaatgcaataaaagaagagcatgcttataatgcaaaacttagtggagggttt
gaaaaagcacaagatataaaatatcaaacatcaaatatagatgcaaacaatatcattatg
caaagtggaaaggatataaacctagaagcaagtaaactaaatgcaacaaatcaaataaac
ctaaatgcccaaaatgatataaatatagaagctttaaataatgtatattatagagataaa
caaagtacaaaaaaagggacatttagtaaaacaacaaaaagagatatggtatataaagag
agtgtaaattcagcagaactaaatgcaaatgatatactaataaatgcaaacaatgatgta
aatctacaagcagccaaactaaaagcacaagataacatcatcgtaaatgcaaaagatgga
aatcttaacatagtagcaaaagagtatagagaaggtgaacttcatgaaaaaagtaaatca
tcttggggaggattgaaaaaaagcttagatataagttcaacggatgctttaaaactaaat
agtgcactaattaaaactgaagcttcaaatgtagtattaacttctggaaaagatataaat
attcttgctagtgagataaatagtggggcagatatacaactaaaagcactaaatgatgtg
ttaatagcatctcaaagtgaatatctaaaaacacaagaagtacataaaaaatctagtttt
aatttagcaggattaacatctttagtagtaccagtagatacaactatttactcaagtgaa
atccataaaaatgataaactaagctcttctagtgttgcaagtaagctaaatgcaaataaa
gatatcctcatagatagtggaagtacaacgatagcaggctcaaatctcgaagcaaataat
ataggtataaaagcagatacaggagagataaatatcctttcaagtcaagatgtacaaaat
gcaacttctttagataaagagataaaactaggattatcagaccctataaaaggtatagtt
caaaatacaaaaaatatgttctcaggagaaacaaaagtaaaatttgaagttggaagttta
acttatgatgaggtagataaagcttcacaaactacaaaaaataactcatcaaatctaaaa
gcaaaagaaaacctagttttagatagcttaacagatataaatgtccaaggaagtaatcta
aaagcaggtgaaaacctagtactaaactcaaaagttggagatataaatatcttaaataca
acagatacttataacgaagatataaaagaaaaacatgcaaaagcaagtgtaaatgtaaca
gtacaaaatgaatatgtagaaacagcacaagctgtaaaaagtgcagtaaagagtgcagag
caactaaaacagacaaaagatgattatagtaaatacaaaggtgaagtaaaaaaactagaa
agtactctaagtgatttaaaacaaagatataaagctaaagaagtagggattgattatgaa
gatatagaagatttgagtgattttatagataatctaaaatcacaagaaaaatactatgta
gcagctattgcagcagcaacggcagatttagctagtaaaacagcagcaatagcaactcaa
gcaggaacagcttatgcttcaagtggaactttaggttttagtgctggaatatctttagat
gtaaatggcgaaaaatcaaaacaaaatataaataaccaaacctcaaatgcatcaaaccta
aacggaaaaaatatctatataaatacagatgagaaattgagtacaaatacaaatgtagta
ggttcaaatgtaatagcagatgagaatttgtatataaatacaaataacctaaatgtaaaa
gcaagccaagataactatacaagtaaaaatgatagcgaaagtataaatggaagtatagca
tttacaatgtatggaggcggaggtggaaccgcaggattaggatatggaaaaagtaactct
tcaagtgatagctttttaaataataactctcaattaagtggaaataatgtaaatataaat
gtaaaaaatgatgcagtgttccaaggagcaaatgtaagagcaaatgatacattgaactta
aatgtaggaaataacctagtattagaatctttaagagatgaatactcttcaaactcaaaa
gggtttaatgtaaacgctggaataggatttggaagtggaggaaaagaaggacatagaaca
ccaagccttgatgttggaaaacaatcttcgacaaatgcaggattttcagtaaataatggt
gttactcaaaataaacaaacagttttaagctccataacaggagataaggtaaatgtaaat
gtaggaaataatacacacctaaaaggttcacttcttgcaagtggaaactatgatgaaaat
ggtgtattccaagatgataaaaacctaaactttattacaaataccctaacatttggaaac
ctatcaaactcaaattactcttcaagtaaatctttaggagcaaatgtaaactataacctt
gaaaataaaaaagtagagaatcaaaaagagaaaccacaacaaaaaggtatttcaagtgta
ggatatcaagctgaaaactctttaagtgcaaatgcaagtaaaactttagcaactttaggg
caaggaaatgtaacagtaaaagatgtagagaattcagatgaattagatagattaaataga
gatacaacagctgtaaataaagatttatactcaagttcaacaggaacaaaagtagatgca
actttggatacaagattgctaactgttgagggaagagagcagattaaaaaagagtatgag
gatatgaataaaaatatgtatattattgctggaactttacctgatgcaaatagtgataat
cctattgaagcaacagtgggtgaaatctggaatggtttaacaaaatatctaactttaggg
attgttccttcaaatgaaaataacggtggtattttagctcaaataccagtattaactggt
gtagatgattctcaacataaaattttacaagtagtaaataaagaatcaactaaatataac
gaacaagattatataagatttgaagatagtagttattataaatctttatctgatgaagat
aaaaagctttttgataaacagaatttatatgtttcgaaagagccaattattgttacaaaa
gatacagtaacttatcaaaattcaataaatggaatgatgaataatgtaggagaagctata
aaaaatggactgcaacaaactggacaaataaatactaatagttcaccagtagaattaaat
gtaaattataatccatcttatggatttttaggagatgtatttgagtcatttgtggataaa
agtggaataggtacaacaggaatagcaaaacaaacaggaggatttgtatatgatacaata
tcagcaagaggaagtgatggaagtaactttgcaatgcactcacaagcaaatgcaatagtg
tacaatggtataatttatatacaaacaacaacagggttgaagcctatgggtaatgaaata
gatgatactaaaacatttgtatcatttggttcaccaatgaatggaaaagatatggaaaaa
ttaataaataaaatgggatatgaatattcaggtgcttatacgaaaagtggagattttgta
ggagaatctttgggtggaaataaaggaaataatggacaagcagatattttagatagatta
aatatattaaatgcaggtaaactatttacaaatagttctccacatagcacatatatttgc
caagattttggaactaatgtaaagtgtgggtacaaaaaatga
DBGET
integrated database retrieval system
