Aliarcobacter butzleri RM4018: Abu_1258
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Entry
Abu_1258 CDS
T00600
Symbol
dnaQ4
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
abu
Aliarcobacter butzleri RM4018
Pathway
abu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
abu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Abu_1258 (dnaQ4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abu03400
]
Abu_1258 (dnaQ4)
DNA repair and recombination proteins [BR:
abu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Abu_1258 (dnaQ4)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
DNA_pol_A_exo1
QSregVF_b
Motif
Other DBs
NCBI-ProteinID:
ABV67515
UniProt:
A8EU91
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All DBs
Position
1255402..1256145
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AA seq
247 aa
AA seq
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MAYYVLFDTETTGAAQEDRVIQFGAMIVDNKGKVEAFDELCSAPIPIKLEAMEVHNITPD
LLENKPKAVETNFYKRLEELNSDENYLIAHNINFDLDMIKKEGFENSYKLIDTLRCAKHL
FSDLPYHRLQYLRYALDLYKFEENEASKYGITIKAHDAIGDVLVMKLFLSKLVGKCREVY
PSLNPMEKLVELTTTPVFINTFKFGKYKGQNIEEVAKIDANYLNWMRTSMNDLDEDMKFT
LDKVLGN
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
ttggcttattatgtactatttgatacagaaacaacaggagctgctcaagaagatagagtt
attcaatttggcgctatgattgttgataataaaggaaaagttgaagcttttgatgagtta
tgttcagctcctattcccataaaacttgaagcaatggaagttcataatataactcctgat
ttattagaaaataaaccaaaagcagttgaaacaaacttctataaaagattagaagagtta
aatagtgatgaaaactatttaatagctcataatataaattttgatttagatatgataaaa
aaagaaggctttgaaaacagctataaattaatagatactttaagatgtgcaaaacatcta
tttagtgatttaccttatcatcgacttcaatacttaagatatgcactagatttatataaa
tttgaagagaatgaagcttctaaatatggtataactataaaagctcatgatgcaatcggt
gatgtacttgtgatgaaactatttttatcaaaacttgtaggaaaatgtagagaagtttat
ccaagtttaaatcctatggaaaaacttgtagaattaactactactcctgtatttataaat
acttttaaatttggaaaatacaaaggacaaaatatagaagaagttgcaaaaatagatgca
aactatctaaactggatgagaacttctatgaatgatttagatgaagatatgaaatttact
ttggataaggttttgggaaattag
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