Aminipila butyrica: Ami103574_08945
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Entry
Ami103574_08945 CDS
T06474
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
abut
Aminipila butyrica
Pathway
abut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ami103574_08945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abut03019
]
Ami103574_08945
Messenger RNA biogenesis [BR:
abut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Ami103574_08945
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
HI0933_like
DUF7600
CFAP54_N
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
QIB69448
UniProt:
A0A858BWH0
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Position
complement(1876749..1878428)
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AA seq
559 aa
AA seq
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MRKRSNKRSSTPLRVIPIGGLNEIGKNITVLEYKDDILIIDCGMSFPEDEMYGIDIVIPD
FSYLVKNKAKIKGIILTHGHEDHIGAIPYFLKQINAPIYGTRLTLGLVENKLKEHGIRAK
MNTVAHGDKVQLGVFTAEAIRSTHSVADSICWCIETPAGRVFHTGDFKVDYTPIGGAPMD
FARLAELGSKGVQLMLCDSTNATRPGYSMSEQTVGITLENIFRNSETRIIIATFSSNVHR
VQRIIDNAVKVGRKVAISGRSMVNVVNISMELGYLKVPANVLVDINKTKNIPDKELVIIT
TGSQGEPMSALSRMASADHKAITIKKGDKVILSSSPVPGNEKTVSNVVNKLFEKGADVIY
SDIADIHVSGHACEEELKLMHSLIRPKFFMPVHGEYRHLKRHAQIAESLGKDPSDIFILE
NGNVLNLTSNSAEITNEEVPAQAIYVDGLGVGDVGNIVLRDRKLLSESGLIIVVAAINRS
SGTICSGPDIISRGFVYVRENENLIDQARKLVTKTLERCCEENIKDWNALKGAVRDDLRG
FIYKKTKRSPVILPIFLEV
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaagaagtaacaaaaggagcagcactccattgagagttattccaataggcggg
ttaaatgagatcggtaaaaacataaccgtcttggaatacaaggatgatatcttaatcatc
gactgcggcatgtccttccctgaagatgaaatgtacggaattgacatcgttatcccggat
ttttcctatctggtaaagaacaaagcgaagattaaaggcattatcctaacccacggtcat
gaagaccacattggtgctatcccgtattttttaaagcagattaatgccccaatctatggc
accagactaacgctgggcttagtggagaacaagctgaaagagcacggaatccgagcgaag
atgaatactgtagctcatggagataaggttcagctgggggtatttactgcggaagccatc
cgcagtacccattccgtagcggattccatctgctggtgtattgagacaccggcgggtcgg
gttttccataccggagattttaaggtggactatacgccaatcggcggagcacctatggac
tttgcccgcttggcagaattgggcagcaaaggggttcagctgatgctgtgcgacagcact
aacgctacccggcctggctactccatgtcggagcagacagtaggcatcactttggaaaat
attttccgaaattcagagactcgaatcatcatcgctaccttctcgtccaacgtacaccgg
gtacagcgaatcatcgataatgcagtgaaggtaggacgaaaagtagccatatcggggcga
agcatggtgaatgtagtgaacatctccatggagctgggctatttgaaagtgccagccaac
gtgttggtagacatcaataagacgaaaaatattccagataaagaattagttatcatcact
accggaagtcagggggagccgatgtccgctctgtccagaatggcttccgccgaccacaag
gctatcaccatcaaaaaaggggacaaggttatcttatcctccagcccggtaccgggaaat
gaaaagacggtttccaacgtggtcaacaagttgtttgaaaagggtgccgatgtaatttat
tctgatattgcagacatccatgtttccggacatgcctgtgaagaagagctgaagctaatg
cattccttgattcggccaaaattctttatgccggttcacggggaatatcggcatttgaag
cgacatgctcagattgcagagagcctcggcaaggatccgtcggatatctttattctggaa
aacggaaatgtgctgaacctaacgtccaacagcgcagaaatcaccaacgaagaagtgccg
gcacaagctatttacgtagacggcctgggcgtaggagatgtgggcaacattgtgctccga
gacagaaagctgctgtctgaatctggattaattattgtagtagcggccatcaatcggtct
tccggaaccatttgctctggtccggacatcatttcccggggttttgtctatgtacgggaa
aatgaaaatcttattgatcaggccagaaagctggtaaccaaaaccttagagcgctgctgt
gaggaaaatataaaggattggaatgcactgaagggggctgtccgagacgatctgaggggc
tttatctataagaagaccaaaagaagtccggtaatccttcctatattcttggaggtataa
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