Aminipila butyrica: Ami103574_11965
Help
Entry
Ami103574_11965 CDS
T06474
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
abut
Aminipila butyrica
Brite
KEGG Orthology (KO) [BR:
abut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abut03032
]
Ami103574_11965 (topA)
03400 DNA repair and recombination proteins [BR:
abut03400
]
Ami103574_11965 (topA)
Enzymes [BR:
abut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Ami103574_11965 (topA)
DNA replication proteins [BR:
abut03032
]
Prokaryotic type
DNA Topoisomerases
Ami103574_11965 (topA)
DNA repair and recombination proteins [BR:
abut03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Ami103574_11965 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Auto_anti-p27
Toprim_4
DNA_ligase_ZBD
Motif
Other DBs
NCBI-ProteinID:
QIB69969
UniProt:
A0A858BXR0
LinkDB
All DBs
Position
complement(2491492..2493573)
Genome browser
AA seq
693 aa
AA seq
DB search
MAGAKNLVIVESPSKAKTIGKFLGSRYKVVASVGHVRDLPKSKLGIDIENNFDPQYIAIR
GKGDVIKAMRQEAKKADKIYLATDPDREGEAISWHIAHLLGIDPENACRIVFNEITKNAI
QTAVKNPRNIDTKLVDAQQARRVLDRLVGYQISPLLWRKIRRGLSAGRVQSAALKMICDR
ENVIRNFKPVEYWNIAALLTELAAGGKPAEKKKFTAKLIEHLGKKITVDNKEEADVVVSA
LNAHDYMVKKVDKKERNKRPYAPFTTSSLQQDAANKLGFYTKRTMMIAQQLYEGVEVKGH
GTIGLVTYIRTDSVRISDEAKGAAKEFISQRYGPEYYTNHVFSNKKKDVQDAHEAIRPSY
IELVPDEIKDSLSKDQYNLYKLIWSRFMASQMAAAVYDSMAVEIENGDYTLKANGSKLKF
DGYLRVYQDGGEDGNEKMLPELVPGQKLNLLELQCDQNFTQPPARYTEASLVKDLEEKNI
GRPSTYAPIIGTIMERKYVSREKKSLLPTDLGFIVTELMEKYFKEIVDVGFTAELEDRLD
DIEIKNLNWKQIVSDFYEILKVELEVADKEIEKVKLEDELTGDMCELCGKPMAKKSGRFG
DFIACTGYPECKNTKPIITKIDAQCPKCGKDIVARRGKNGRMFYGCSGYPECNQVFWSKP
TNQKCPQCGSLLLEKKTKTTSLACSNSECGYKE
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcgctaagaacctggtgattgtggaatcaccgtccaaagcaaagacaatagga
aaatttttaggaagcagatataaggtagtggcttctgtagggcatgttcgggatttgcct
aaaagcaagctggggattgacatcgaaaacaattttgaccctcaatatatagccatacga
ggcaaaggcgacgtaattaaagccatgcggcaggaagccaaaaaggccgataaaatctat
ctggcaactgacccggaccgagaaggcgaagcaatttcctggcatatcgcacaccttttg
ggaattgatccggagaatgcgtgccggattgtttttaatgaaattacaaagaacgccatt
cagacagcggtgaagaatccaagaaatattgataccaagctggtagatgcgcagcaggct
cgtcgagttctggatcgattggtagggtatcagatcagcccgctcctgtggcggaagatt
cgccgaggcctcagtgcaggccgagtgcagtcggcagcactaaagatgatttgcgaccga
gaaaatgtaatccgaaactttaaaccggtagaatactggaatattgcagctcttttaacg
gagcttgcagcaggcggaaagcctgccgaaaaaaagaaatttacagccaagctcattgag
catttaggcaagaaaattaccgtagacaacaaggaagaagcagatgtggtggtgtcagct
ttaaatgcccacgattatatggtaaaaaaggtggataagaaggagcggaataagcggcct
tatgcccctttcactactagtagtcttcaacaggatgcggccaacaaactgggattttat
accaaaagaacgatgatgattgctcaacagctgtacgaaggcgtagaggtaaaaggacac
ggtaccatcggtttagtaacctatatccgtaccgattccgtgcgaatttctgatgaggcc
aagggagccgctaaagaatttatcagtcagcggtatggcccagaatattatacaaaccat
gtgttctctaacaagaagaaagatgtgcaggatgcccatgaagccattcgtcccagctat
attgagttagtcccagatgaaatcaaggattccttgagcaaggaccagtacaatctgtac
aagttaatctggtctcggttcatggctagtcagatggcagcggcggtatatgattccatg
gcggtagagattgaaaatggcgattatacgttaaaagccaatggctccaagttgaaattt
gacgggtatctacgggtttaccaggatggcggagaggatggcaacgaaaagatgctgcct
gagttggtgccgggacagaagttaaacctgctggaattacaatgtgaccaaaactttacg
cagcctcctgcccgctatacggaggctagcctggtgaaggacttggaagaaaaaaatatt
ggtcggcccagcacgtacgcgccgattatcggcaccatcatggagcggaaatacgtttcc
agagagaagaaatctttacttcctacggacctgggctttatcgtcactgaactcatggaa
aagtattttaaagaaatcgtggatgttggatttacagcagagctggaagatcgcttggat
gacatcgaaataaaaaatctcaactggaaacagattgtcagcgatttttatgagatttta
aaagtagagttagaggtggctgacaaagagattgaaaaggttaagctggaggacgaactt
actggtgacatgtgtgagctgtgcggcaagcccatggcgaaaaagagcggacgatttggt
gatttcatcgcctgtactggctatccggaatgcaaaaataccaagccaatcattaccaag
attgatgctcaatgcccgaagtgcggcaaagatattgtggcaagaagaggcaaaaatggg
cggatgttttatggttgcagcggctatccagagtgcaatcaagttttctggagtaagccc
acgaatcagaagtgccctcagtgcgggtcactgttgttagagaaaaagacaaaaactact
tctttggcgtgttcaaacagtgaatgcgggtataaagagtaa
DBGET
integrated database retrieval system
