Agaricus bisporus var. bisporus H97: AGABI2DRAFT115683
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Entry
AGABI2DRAFT115683 CDS
T03140
Symbol
AGABI2DRAFT_115683
Name
(RefSeq) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
abv
Agaricus bisporus var. bisporus H97
Pathway
abv03420
Nucleotide excision repair
abv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AGABI2DRAFT115683 (AGABI2DRAFT_115683)
03430 Mismatch repair
AGABI2DRAFT115683 (AGABI2DRAFT_115683)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abv03400
]
AGABI2DRAFT115683 (AGABI2DRAFT_115683)
Enzymes [BR:
abv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AGABI2DRAFT115683 (AGABI2DRAFT_115683)
DNA repair and recombination proteins [BR:
abv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AGABI2DRAFT115683 (AGABI2DRAFT_115683)
MMR (mismatch excision repair)
Other MMR factors
AGABI2DRAFT115683 (AGABI2DRAFT_115683)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
AAA_30
Motif
Other DBs
NCBI-GeneID:
18076661
NCBI-ProteinID:
XP_006458648
JGI:
Agabi_varbisH97_2_115683
LinkDB
All DBs
Position
Unknown
AA seq
858 aa
AA seq
DB search
MLSATVNVNSGSIGSDFLSSLNSAQLQAVQHSPSIPLQILAGPGSGKTKVLISRVAHLIC
HHDIAPSSICAVTFTNKAANEMRQRLTKLLGDEITSQIKMGTFHALCANFLRRYGNAIAL
ERNFTVCDAEESKKLITEFFKPYKAELAQTDITLKESTILDKISKAKAKGFDAAAMREAC
NAARSLIPSITDQINSIVSDIYENYEKALNRSNSLDFDDLLLFGVKLFRNHPKAVDWCSH
VLIDEFQDTNIIQYELMVELAVHKCITVVGDPDQSIYGWRSAEIGNLTRMQKGMSRRPPS
KRSISNHNLFKLSDYPKTEQIFLEENYRSTGSILNASLAIVAQDKTRVQKSLFTSHPTGS
TPVLCALQDEHDEARHIASEIKRVVAYTGSLLNYGDFAILLRFTALSRTLESALQKEGIP
SRVLGGHKFFERLEVKDLLAYLQLIDNSDYNPAFIRAVNVPSRGVGDKTLDGLSSIAQSK
NLSMLALVQNICDNRIPDLKPPIKRKLGNFIKVIQKLKRFASEGMSPPDLLHQLLELVDY
ENHLKKTQKDWESRWENVKELITFASEVNTDSPPLGEEELELVERPTPLRLFLQASMLSS
EGDGDKENQKEKVTLVTCHAAKGLEWPVVFIPSVDDGIFPFYRTDDVEEESRSEAVSDVP
PGLDVSQIHAMSHMLGRPEPDKEQIQKQIEEYRQRFPEQEYPGPATPSPDYRARTQDYNP
LNPPGFISSSQTLSQTQGINNSQHWRRPTFMAANSSQPVQAGFAHSTSKVPLIKRALSLQ
VPLVPTNTPTGVNQVLQRIDPSSFNKPEAPRGTFDAGPSATEATSEDQNLPLHPGTKRRL
GVGRNNTGYANKKFKSPT
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgctctcagctacagtcaacgttaattctgggtcaattggttctgatttcttatcctcc
ttgaattcggctcagcttcaagccgtccaacattcaccttcaatacccctgcaaattctg
gcaggtcctggaagtgggaagaccaaagtcctcatatctcgagttgctcaccttatttgt
caccatgacatagctccctcttcaatatgtgcggtcacctttaccaacaaggctgcaaac
gagatgcgacaacgcttgacgaagcttctcggtgatgaaattacgagtcagatcaagatg
ggaacgtttcatgcattatgcgccaatttcttgcgacgatacggcaatgccattgctctc
gagcgaaattttactgtgtgcgacgcagaggagagtaagaaacttataacggaatttttc
aagccttacaaggcagaactcgcgcaaaccgatatcacactcaaagaatcaactatacta
gacaagatttccaaagcaaaggcaaaagggtttgatgctgcagctatgcgtgaagcgtgc
aacgcagctcggtccctcataccatcaattaccgaccaaatcaattccattgtgtcagat
atatatgaaaactatgagaaggcgctgaaccggtcaaattccctagactttgatgatctt
ctgctctttggagtaaaattgttccgaaaccatccgaaggcagttgactggtgtagtcat
gtcttgattgacgaatttcaggataccaatatcatccaatacgagctaatggttgaactc
gctgtgcacaagtgtataacggttgtgggggaccctgaccagtctatctacggttggcgc
tccgcggaaattggaaacttgaccaggatgcaaaaaggtatgagccgacgccctccatcg
aaaaggtctatatccaatcataacctcttcaaactgtcagactatcccaaaacagagcag
atttttctggaggaaaattatcggtcaaccggttctatactaaacgcaagtttggcaatt
gttgcgcaagacaaaacacgcgtccagaaatcactgttcacgtcacacccgaccggaagc
acaccggtcctgtgtgctttgcaggatgaacatgacgaggctagacatattgcttctgaa
atcaaacgagttgtcgcctatacgggtagtcttcttaactacggagattttgccattctt
ctaaggttcacagctttgtctcgtacactggagagtgcgctccaaaaagagggcattccc
agtcgcgttttaggaggacacaaatttttcgagcgtttggaggtcaaagacttgctcgca
tatcttcaattaatcgataattcggactataatcctgcatttatccgcgcggtgaacgtt
ccaagtcgtggagtcggagacaagaccctagacggactatcttccatagctcagagtaaa
aacctatcaatgctcgcacttgttcaaaacatctgtgataaccgtattccggatctcaag
cctccaatcaagcgcaagctggggaactttatcaaggtcattcaaaaattgaaaagattt
gcgtccgagggtatgtcaccacccgaccttctacatcagttacttgagctggtagactat
gagaatcatctaaagaagactcaaaaggattgggaatcaagatgggagaacgtgaaggag
ctgataacctttgcaagtgaagttaacaccgatagtcctcctctgggcgaagaagaacta
gaactcgtcgaacgtccaacacccctgcgacttttcttacaggcttcaatgctatcatcg
gaaggtgatggcgacaaggaaaaccagaaagagaaagttacgctcgtcacttgccacgct
gccaaaggtttggaatggccagtggtatttattccctctgtcgatgatggaatctttccg
ttctatagaacagacgatgtagaagaagagagccgttcagaagcagtctccgatgtacct
ccaggtcttgacgtttcgcagattcacgcgatgtcacatatgttaggtcgtcctgagcct
gacaaagaacaaattcagaagcaaatcgaagaatatcgtcaacgtttcccggaacaggag
tatccagggccggcgaccccaagcccggattatcgtgcgaggacgcaggactataacccc
ttgaatcccccagggtttatttcctcaagccaaacccttagccagactcagggcattaac
aattcgcaacactggcgacgtccgacattcatggcagccaacagctctcaaccggttcaa
gccggatttgcacactctacatccaaagtgcctttgataaagagagcgttatccttgcaa
gtgccgttggtacctacaaatactcctacgggagtgaaccaagtgcttcagcggattgat
ccgtcgtcgtttaataagcccgaagctccgcgaggcacattcgatgctggtcctagtgcg
actgaagcgaccagtgaagaccaaaacttgcctttacatcctggtaccaagagacgtctc
ggagttggtcgaaacaatactggctacgcaaataaaaaattcaagagccctacgtaa
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