Agaricus bisporus var. bisporus H97: AGABI2DRAFT117079
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Entry
AGABI2DRAFT117079 CDS
T03140
Symbol
AGABI2DRAFT_117079
Name
(RefSeq) hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
abv
Agaricus bisporus var. bisporus H97
Pathway
abv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AGABI2DRAFT117079 (AGABI2DRAFT_117079)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abv03019
]
AGABI2DRAFT117079 (AGABI2DRAFT_117079)
Messenger RNA biogenesis [BR:
abv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
AGABI2DRAFT117079 (AGABI2DRAFT_117079)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
AGABI2DRAFT117079 (AGABI2DRAFT_117079)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Cep57_MT_bd
Motif
Other DBs
NCBI-GeneID:
18076911
NCBI-ProteinID:
XP_006460119
JGI:
Agabi_varbisH97_2_117079
LinkDB
All DBs
Position
Unknown
AA seq
703 aa
AA seq
DB search
MAARKLQTEIDRTLKKVSEGVELFESIYEKMQASTNQTQKEKLELDLKTQIKKLQRLRDQ
IKTWVASNDIKDKSQLLDNRRLIETQMEKFKACEKEMKTKAFSKEGLIQATKLDPKEQEK
EEATQWLQSQVEELQMQIESAEAEVESLQGTGKKRNKQGSNAGRLEALETLNERRKWHIS
RLELVLRLLNNGSLTTDRVLGLKEDVQYFVESNTEEDFEEDEGIYDELNLEEEEEKFGLV
ADEDESSSSDSGSEDKTTRPAKKHEEESVSSGKRDDSPILKKAAVTLQLRKHSLDTKPAA
NLNFSQSMSSVVKAPVPKPPQLPPIKYATVAQAMTQSSQQSHVPTASSSTTHLPATSQTQ
TSPSAAVTSPLVPPPSSMQDHSSISASSPSLTHPSVISPILSSAASVSHQPDGSTYSAQD
SPVPSDAVPAKTQSPPSPQKVAAVPKYRIDVASSTDQPQQQVSNDSQPALSQTAPGLSPL
PQQVQQIPSTTRAKSPPQSVTPGQPIFPPGVKVAQGEQQQQPAIGYQRPLSSAPQQQTRS
SASSAFPGSLQDLVVSFENVKQKASVRMNNLDQVHKMLEGGYTSMPQPQDTEKQVYFTAP
YYPQTPHPLLNTAAIFSQLDVETLFYVFYYLPGTYQQHLAAKELKRQSWRFHVKYLTWFQ
RHSEPQAITDEYEQGVYVYFDWEGSWCQRKKSDFRFEYRYLED
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggctgccagaaaactgcagaccgaaatcgaccgaaccctgaagaaggtatccgaaggc
gtcgagctcttcgagagtatatacgagaagatgcaggcatcgactaaccagacccagaaa
gagaagctcgaactcgacctcaagactcagattaagaagcttcagcggctacgagaccaa
attaagacttgggtagccagcaacgacatcaaggacaagtcccagctactcgataaccga
agactcatcgagacgcaaatggagaaattcaaggcctgcgaaaaggagatgaaaacaaag
gccttttccaaagagggcctcatacaggcaaccaaactcgaccctaaagaacaagagaaa
gaagaggccactcaatggttgcaatctcaggtcgaagaactccagatgcagatcgaatcc
gccgaagcagaagtcgagtctctacagggcactggcaaaaagcgcaacaagcaaggctca
aatgccggacgccttgaagcccttgaaactctgaatgaacgtcgcaaatggcacatcagc
cgactcgaacttgtcctccgccttctcaacaatggctctttaaccactgacagggtcttg
ggtctcaaagaagatgtccagtattttgtagaaagcaatactgaagaagactttgaagaa
gacgaaggcatatatgacgagcttaatctcgaagaggaagaagagaaattcgggcttgtc
gcggatgaggacgaaagcagtagttctgacagcgggagcgaagacaaaacaacccggccc
gccaagaagcacgaagaagagtctgtatccagtggcaaacgagacgacagtcctattctc
aaaaaagcggccgtcacgctacagctacgaaagcattctctggatacgaaacctgcagcg
aatctcaatttctcccaatccatgtctagtgtcgtaaaagctccagttccaaaaccgcca
caactacctccaattaagtacgcgaccgttgcacaagctatgacacaaagctcccaacag
tcgcatgtgccgacggcgtcatcgtcaaccacccacctaccggcaacatcgcaaacccaa
acttcaccctcggctgcagtcacctcaccattagtgccacctccttcatctatgcaggat
cattcctctatctccgcttcctcgccaagcctaacgcatccatcggtgataagtccaatc
ttgtcttctgccgcctcagtatctcaccaacccgacggctcaacgtattccgcgcaagat
tcaccagttccatcagatgctgttcctgcgaagactcaatcacccccatcaccccagaaa
gtcgcagctgtgcccaagtaccgtatagatgtagcctcgagtacagaccagccgcaacag
caagtcagcaatgactcccaacctgctctatctcagactgccccgggtctctcgccactt
ccccaacaagtacaacagattccttccactacaagagcgaaatcacctcctcagagtgtc
accccaggccaacccattttccctcctggagtgaaagttgcacagggcgaacagcagcag
caacccgccattgggtatcaacgacctctgtcgtctgcaccacaacagcagacccgctct
tcggcttcttcggcattccctgggtcattgcaagatcttgtagtatcatttgagaatgtc
aagcagaaagcctcagtccgcatgaacaatctcgatcaagtacacaagatgctcgagggt
ggttatactagtatgccccagccacaagatacggaaaagcaagtttattttacagcgcca
tattatcctcaaactccccatcctttattgaacactgcagctatcttttcccaactagat
gtggagacactgttctacgtcttctattaccttccgggaacataccaacaacatctagca
gcaaaagagttgaagcgtcagtcatggcgattccacgtcaagtatctgacatggttccag
cggcattctgaaccacaggctattaccgacgagtatgaacaaggggtatatgtctacttt
gactgggaaggatcatggtgtcaacggaagaagagcgatttccgctttgaataccgctat
ctggaagactaa
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integrated database retrieval system
