Agaricus bisporus var. bisporus H97: AGABI2DRAFT118092
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Entry
AGABI2DRAFT118092 CDS
T03140
Symbol
AGABI2DRAFT_118092
Name
(RefSeq) hypothetical protein
KO
K14327
regulator of nonsense transcripts 2
Organism
abv
Agaricus bisporus var. bisporus H97
Pathway
abv03013
Nucleocytoplasmic transport
abv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
AGABI2DRAFT118092 (AGABI2DRAFT_118092)
03015 mRNA surveillance pathway
AGABI2DRAFT118092 (AGABI2DRAFT_118092)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abv03019
]
AGABI2DRAFT118092 (AGABI2DRAFT_118092)
Messenger RNA biogenesis [BR:
abv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
AGABI2DRAFT118092 (AGABI2DRAFT_118092)
mRNA cycle factors
P-body specific factors
AGABI2DRAFT118092 (AGABI2DRAFT_118092)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
DUF4472
Motif
Other DBs
NCBI-GeneID:
18077058
NCBI-ProteinID:
XP_006461174
JGI:
Agabi_varbisH97_2_118092
LinkDB
All DBs
Position
Unknown
AA seq
1155 aa
AA seq
DB search
MDDERARYEKRVKFKELNTHFKLSRLDSSLKRHTTLIKRIRQSMAAENRDQIIKDIESLS
LEKYIDEIAGAIVEGIARCKTERDVWGAVEIISLLHRRFSKEFTSVLISLLSTAIGAPSR
ASLSGLTAEQKEKEDGARVLRQRPVLRICSELALVGVIRDGPEKSGGEWIMKAIKELLSN
DPSLSSLPLLITFLKSYSRPFLGIVPPATLKQNPVAAEPGSLSAAQSTASDDALHFPPIL
NEEEELVELDIRDRFKRMCEGYYDNVCKKLVMEHKRLQEQDKRNHEAYIRSGEIFEDRQQ
AYEKMTKGYEKLLANCQSLSELLYLPLPNLPRASHKSESIQIGSTHGSMFNDSEDTTVVG
GKWEDEEERRFYEDVPDLKDYVPSSVLGIDNSNEVADDSDKDKEQQRIQQEKEDFRLLEE
ELQKLQSDQSSEISTPAGDSIAAEEDEARTPVPGSAKASPPLSPHLTPQGPSQLLTALLV
RLQDATNRALIDQAAIDFAFLNSKAARKRLVKALSQVPKNRVDLLPHYSRLVATLNKYMP
DVGSDLLSLLEDEFRYLQKKKNVVKELGELRMRNITFFSHLTKFRVVPPHVILHVFKVCL
DDFTGTNIDNIAMLLEGCGRFLLRSEETTERFGTMLELMRRKQSLQHFDQRQILLLENAY
YQCNPPERAPKQEKHRSSIELFIRHLVYDVLAKRTIDKVLKLIRKLDWDNEEVKLVLHKV
FTKPWKIKYSSISLLAMLTYDLQRYRPAFSISVVDQILEDIRRGLEQNVYSANQKRIATI
KFLGELYNYRMFSSSIIFDTLWLIVTFGHPDGRPLPGQPVALDMPDDFFRVRLVCALLDT
CGMCFDRGTQKKKLDNFLTFFQYYVLCKQPLPMDVDFMLSDSLEAVRPKFAMAKDLEEAA
IAVDEMYNLAYQVAGHTDESGEESDHDDEKRSNDDDGEDEAMDEDEEGHESPVGERAPSP
DEEIVLSTSNNNQEYFGPSEEADTEFAKELAKLVTDTSGESRKVDKRTALALWDSAVLPP
ALRKKKTVDDGEEDEVVKDVEGSRTMNFTIVTKRGNKQLARQLAIPTTSPLAIHTRSAQM
QDKVEQQQLKRLVLDYEQREEAEEWKGPVRSKYGTMDDLGDTQPEVKLLRARFSRTDVFL
QLFDTRASRSQRWTL
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgagagagcgcgatacgagaagcgcgtcaagttcaaggagctgaatacccac
ttcaagctttcgaggctcgattcatctctcaagcgtcatacgactctgatcaagcgcatt
cgtcaatcaatggctgctgaaaacagagatcagattataaaggatatcgagtctctctca
ctcgagaaatacattgacgaaatagctggtgcaatcgttgagggtattgctcgttgtaaa
accgagagggatgtatggggagctgttgaaatcatctccctcttacaccgtcgcttttcg
aaagaattcacttcagtgctaatatctctattatccaccgctattggcgcgccttcgagg
gcaagtctcagtggcctgactgcagagcaaaaggaaaaagaggatggtgcacgcgtactg
cggcaacgcccagtccttcgcatatgctcagaattagcattagtcggtgtcatacgcgac
ggcccagaaaaaagtggcggggaatggattatgaaggcgattaaagagttgctttcaaac
gacccaagtctatcctcattaccccttctcatcacctttcttaaatcatattctcgacct
tttcttggtatcgtgccgccagccaccctcaaacaaaatcctgttgccgctgaacctgga
tccctttcggccgctcaatccactgctagcgacgatgccttacactttccacccatctta
aacgaggaagaggaacttgtcgaactagacattcgtgaccgcttcaaacgaatgtgcgag
ggttactatgataatgtctgtaagaagctggtcatggagcacaagcgcctacaagaacaa
gacaagcgaaaccatgaagcatatattcgttctggggagatttttgaagaccgtcaacaa
gcttatgaaaagatgaccaaaggatatgaaaagcttctcgctaattgccaatcgctatcg
gagcttttgtaccttccccttcccaatctgcctagggcatcgcataaatccgaatcgata
cagataggctctacgcatgggtccatgttcaatgattcggaagatactaccgtagtagga
gggaagtgggaggacgaagaagaacgcaggttctatgaggatgtcccggatttaaaggat
tacgtcccaagcagtgtgctgggaatcgacaattcgaatgaagtcgcagatgatagtgac
aaggataaggaacaacaacgcatacaacaggaaaaagaggatttccgtctgctcgaggaa
gaattacaaaagcttcaaagtgaccagtcttcagagatcagtactcctgccggtgattcg
attgctgcggaggaagatgaggctcgtactcccgttcctggttcagccaaagcttcgcct
ccactctcgcctcatcttacaccacaaggaccatctcaactcttgaccgccttgctcgtt
cgacttcaagacgcgactaatcgtgcacttatagatcaagcggccatcgattttgctttt
ctcaactcaaaggctgcgcgcaagcgtctcgtcaaggctctgagccaagtcccgaaaaat
cgagtcgatcttcttccacattattccagattagtcgcgactctcaataaatacatgcca
gacgttggttcggatctcttgtcccttctagaggatgaatttcgttatcttcaaaaaaag
aaaaatgtagtaaaggagcttggagagctcagaatgaggaatataacctttttctctcac
cttactaaatttcgggttgtcccacctcatgttatccttcatgtcttcaaagtttgcctg
gatgattttaccggtacaaacatagataacatcgccatgttacttgagggatgtggccgc
ttcttgttgaggagtgaagagacaacggaacggttcggcacaatgcttgaattaatgcgg
cgtaagcaaagtctacagcacttcgaccaacgccaaatccttctattggagaatgcatac
tatcagtgcaaccccccggaacgtgctcccaagcaagaaaagcatcgcagttccatagaa
ttatttatacgccatcttgtttatgatgttcttgccaaaagaacgatagacaaggtcctc
aagctgatccggaagctggactgggataacgaagaagtcaagttggttctacacaaagtt
tttaccaagccttggaaaatcaaatacagtagcatctccctgctagcgatgttgacttat
gacttgcagcgttatcgtccagccttctccatctccgtcgtcgaccagatcttggaagac
ataaggcggggtctcgagcaaaatgtctacagcgccaatcaaaaaagaatagccacaatc
aagtttttgggagagctctataattatcgcatgttcagctccagcatcatttttgatact
ctgtggttgattgttacatttgggcatccggatggacgaccgttacctggtcaaccagtt
gcattggacatgccggatgatttcttccgcgtcagacttgtatgcgcgcttctggatact
tgtggaatgtgcttcgatcgtggaacgcagaagaagaaattggataacttcctgaccttc
ttccagtactatgttctttgcaaacaacctcttcccatggatgtcgacttcatgctgtcc
gactccctagaggcggtgcggcctaaattcgcaatggccaaggatctcgaagaagcagcc
attgccgtggatgagatgtataacttagcttatcaagtcgcaggacatacggatgaaagt
ggagaggaaagtgaccatgacgacgagaagcgttcgaatgatgatgatggtgaagatgaa
gctatggacgaggatgaggaaggccacgaatcaccagttggtgaacgtgccccatctcct
gacgaggaaattgttttgtcaacgagcaataacaatcaggagtacttcgggccttctgag
gaggccgatacagagtttgcaaaagagttggctaaacttgtcactgatacttcaggggaa
tcgagaaaggtcgacaagcgaacggccctggcactctgggattccgccgttcttcctcca
gcgcttcggaaaaagaaaacggttgatgatggcgaagaggacgaggttgtcaaagatgtg
gaaggtagtaggacgatgaactttactattgttacgaagcgcggaaacaagcagctggcc
cgtcaactcgctataccgaccacctctcctctggctatacacacacgcagcgctcaaatg
caagacaaggttgaacagcaacaattgaagcggcttgtgctcgactatgaacagcgcgaa
gaagccgaggaatggaaagggccggtgcgatcaaaatacggtacaatggatgatttggga
gatacccaaccagaggtcaagttgctccgggcaagattcagtcgcactgatgtcttcctc
caattattcgatacgcgtgcatcccgctcgcaacggtggacgctctga
DBGET
integrated database retrieval system