Agaricus bisporus var. bisporus H97: AGABI2DRAFT119782
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Entry
AGABI2DRAFT119782 CDS
T03140
Symbol
AGABI2DRAFT_119782
Name
(RefSeq) hypothetical protein
KO
K19720
collagen type III alpha
Organism
abv
Agaricus bisporus var. bisporus H97
Pathway
abv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
AGABI2DRAFT119782 (AGABI2DRAFT_119782)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
abv00536
]
AGABI2DRAFT119782 (AGABI2DRAFT_119782)
Glycosaminoglycan binding proteins [BR:
abv00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
AGABI2DRAFT119782 (AGABI2DRAFT_119782)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-RING_Vps41
zf_RING_Vps8_fungal
zf-C3HC4_2
zf-RING_11
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
Prok-RING_4
RINGv
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
18077354
NCBI-ProteinID:
XP_006462951
JGI:
Agabi_varbisH97_2_119782
LinkDB
All DBs
Position
Unknown
AA seq
1044 aa
AA seq
DB search
MDTRDNDDHNDNNMQAENTTPAQPVAPAEIEMQDLDDSTVESSTSTPLNASTTSLASSLS
ERTGLRRTRVEDDHDDERDRRHPSERVGSPLNSPPSLQSSSSLSALHTAESASTSSTSGP
PSFSGQLPASSNSAAPASSGPFRFFQHMPTFSHNHNTASPSHSSSPHVHLPPLQHNTTSS
TDSAVPSSNGTSTSGANSDAAPTRPPRLNIVHQYLGGFAVSFDVNGVRTTVPLSGPAPPP
NAPRANTDANSMATDPSTNGPAGENPVPEQSQSESEPQPQAQPQPQQQRRFPGDGGQSLP
TNNTIADLLRHLSILTALSMGGAGLFERDMEDPERAKKLVDGLEDVPVGLVKRLERIGKA
SENNEDGSEADGTGLGDGGCAICWDRLLTKEKADEGQAVEDESTGTEPTAASSDSHPPPP
TDPTTEDANETSPGNFKRVVSLPCAHVFHAQCLIPWFSKPKQTTCPICRFNIDPENLTYT
SGAQRRAAARREREQERARARAEGGDDTEERDEEGDDANGGDGPGIGIDIPMFGGTPIIV
PLGGGRRGGSGDAPPANAQDQPNADGADADVPAEDDTPHTGDHAHDHRLQDIVTIGVDMY
IGRGPPPPFAMGGGANVFQFPFPGGAHGPPMNAAPGNPTTTNTNTNHNPDVDAADPPQPS
TAGDADAQASFGRILGDAFSRIFAGGHMHEHGHREPQAPAANGGRNDNTGPGDEHEGPAM
FGPERPPASVRGAAPTMPGGVGIGVGGGRGAGPFPFSFPVGGGGGAPGGGDVPQNGGQQG
AGGGPRMFETMIPLLDILFGPRTPTTQTQGEGQAPAQPAPQPSQQPEPQPAPQPAQPQPQ
HPQPAPHERGNLPTSGFGWTFISGPPGAPPTFMSGSPMPRPASAPVPGRQRQQEARKLWV
LPSAPGLTLRQRVEKKEQEAGLRCCDVSCGVGPSDEDPLGDVGSEEMRQVKIRKFEGVSA
LDSGLVIGEEEHYRRDRYRCDAVCEHTFHSSCLVSAERVASRGVSPAFVGGLEGGEEVEV
SCPVCRGVGRVSRSDWENGVRALG
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggacaccagagacaacgacgaccacaacgacaacaacatgcaggcggagaataccact
ccagcccagccagtagccccggctgaaattgaaatgcaagacctcgatgactcaacagta
gagtcttccacttcgactccgttaaacgcatctaccacctctctggcttcgtcgctgtct
gaacgcactgggttgcgccgcacgagggttgaggacgatcacgacgacgagcgtgaccgt
cgccacccatccgaacgtgttgggagcccactgaattcacccccctcgctgcagtcttct
tcgtcactgtcagccctacacactgctgagagcgcatccacctcttctacttccggaccg
cccagcttttctggtcagctgccagcttcttctaattctgccgctccagcttcttctggt
cctttccgattcttccaacacatgcctaccttcagccataatcataatactgcatcgcca
tcacattcctcatcacctcatgtccaccttccaccgcttcaacataataccacgtcgtct
acagatagcgctgtcccctcatccaatggaacttccacatctggcgcgaattctgatgcc
gcaccaacacggccaccccggcttaatatagtacaccaatatcttggtggttttgccgtc
tcttttgacgtgaacggtgtccggaccactgttcctctatctgggcctgcccccccacct
aatgcacctagggctaataccgatgccaatagtatggcaacagatccctctactaatggt
ccagccggcgaaaatcccgttcctgaacaatctcaatctgagtcagaacctcaaccacag
gctcagccacagccacaacaacaaaggcgatttcctggtgatggcggacaatctttacca
acaaacaataccattgccgatcttctcaggcatcttagcattctcaccgccttgtctatg
ggaggtgctgggttatttgaacgggatatggaggatcccgaaagggccaagaaattagtt
gatggattggaggacgttcctgtaggactagtgaagcggttggagagaattggaaaggcc
tctgagaataatgaagatggtagcgaggcggatggtactggtttgggagatggaggttgc
gcgatttgttgggacaggttgttgacgaaagagaaagcagacgaggggcaagcagttgag
gacgaaagtacgggtaccgaacccacagcggcgtcatctgattcacatccaccaccaccc
accgatcctactacggaagacgccaacgagacatcaccaggcaactttaagcgtgtagtc
tcactcccttgtgcccatgtttttcacgcgcaatgtctcatcccgtggttctctaaacca
aagcaaacgacttgtcccatttgtcgattcaatattgatcccgagaatttaacatataca
tctggtgctcagaggagagctgctgctcgtcgcgaacgcgaacaagagcgtgcacgggca
cgtgcagaagggggcgatgatactgaagagagagatgaagaaggtgatgatgcaaatggt
ggtgatggacctgggattggaatcgatattcctatgtttggtggcactccaattatcgtc
ccattaggcggtggtcgacgcggaggttctggtgatgcacctcctgcaaatgctcaagat
caacctaacgcagacggcgccgatgcagatgtaccggctgaagatgacactcctcatacc
ggtgatcatgcacacgatcatcgcttacaagatatcgttactataggagtggatatgtac
attggacgaggacctccaccacctttcgctatgggcggcggcgctaacgtctttcaattt
cctttccccggaggtgcccatggccctcccatgaacgccgctcctggcaaccccacaaca
acaaataccaataccaatcataatcccgatgttgatgccgctgatcctcctcaaccttct
acggctggtgacgctgatgctcaagctagtttcgggagaattttgggtgatgcgttttcg
aggatttttgctggaggacatatgcatgaacatggacatcgggagccccaagcacctgct
gcaaatggtggaaggaatgataatactggcccgggtgatgaacatgaggggcctgcgatg
tttggaccggagagaccgcctgcgtcggtacgtggtgctgcgccgacgatgcctggaggt
gttggaataggagttggtggaggtagaggagcgggaccgtttccgttctcgttccctgtt
ggtggtggtggtggtgctcctggtggtggtgatgttccgcagaatggaggtcaacaggga
gctggtggtggtccgaggatgttcgagactatgattccgttacttgatattctatttggt
ccgcgaacgccgacaacccagactcaaggcgaaggtcaggctcctgcccaacctgctcct
cagccttcacaacaacctgagcctcaacctgctcctcaacccgcgcaaccacaaccacag
cacccccaaccagcaccacatgagcgtggaaatttacccaccagcggatttggatggacc
tttatttcaggtcctccaggtgcgccaccgacgtttatgtcgggttcaccgatgcctcgt
ccagcatctgctcctgttccaggtcgacaacgacaacaagaggctaggaagttgtgggtg
ttgccttctgcgcctggattgactttgagacagagggtggagaagaaggaacaggaggcg
gggttgaggtgttgtgatgtttcgtgtggggttggacctagtgatgaggatcctttgggt
gatgttgggtcggaggagatgaggcaggtgaagattaggaaatttgagggtgttagtgcg
ttggatagtgggttggtgattggtgaggaggagcattatcgtcgtgataggtatcggtgt
gatgcggtgtgtgaacatacttttcattcgagttgtcttgtgagtgcggaacgtgttgct
tcgagaggtgtttcgccggcgtttgtgggaggattggaggggggagaggaggtggaggtt
tcgtgtccggtgtgtagaggtgttgggagagtgagtagaagtgattgggagaatggggtt
agggctcttgggtga
DBGET
integrated database retrieval system