Agaricus bisporus var. bisporus H97: AGABI2DRAFT122323
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Entry
AGABI2DRAFT122323 CDS
T03140
Symbol
AGABI2DRAFT_122323
Name
(RefSeq) hypothetical protein
KO
K10858
DNA mismatch repair protein PMS2
Organism
abv
Agaricus bisporus var. bisporus H97
Pathway
abv03430
Mismatch repair
abv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AGABI2DRAFT122323 (AGABI2DRAFT_122323)
03460 Fanconi anemia pathway
AGABI2DRAFT122323 (AGABI2DRAFT_122323)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abv03400
]
AGABI2DRAFT122323 (AGABI2DRAFT_122323)
DNA repair and recombination proteins [BR:
abv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
AGABI2DRAFT122323 (AGABI2DRAFT_122323)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
18077927
NCBI-ProteinID:
XP_006456424
JGI:
Agabi_varbisH97_2_122323
LinkDB
All DBs
Position
Unknown
AA seq
1016 aa
AA seq
DB search
MSKNDVTQSSIKPIDKTSVHRITSGQVVIDIQTAVKELIENSLDAGATNIDVRFKQYGLT
SIEVVDNGSGIAEKDHEVIGLKHHTSKLSTYTDLAELHTFGFRGEALSSLCALCQSVQVT
TSTQSPVGYCLDLDAGGRIKSQKTVARPKGTTVTLKGLFQPLPVRRKELERNIKREFAKA
LGLLNAYALLPCTVEPGIRLNVSNQPDKGAKSQVLTTQGTPSMRASVSTLWGPKALDNVV
DLDLRLEVERERGNKRTISQALPLTDDEPLQVRVRGLISKFSVSCGRTGTDRQFFYVNGR
PCTLNKVQKAFNEVYRSFNPNQSAFIVADFVIPTAACDVNVSPDKRTIFLHSESNLIAAL
KEALERNFNPERSTFEVTSSQAKTVQTTLNEVTQSVKGTTTNTSRPCHHSDSSDDPTEDS
TISTSSPTIISTSSTNDNCSDQPSIAASKVPLFIPDPDDDIIPESVVEAPRNLGRELPIP
HLPERSGHRDDQNQEIDQEVVIDTTRASWNRQLPSSPATMSKQRVDNDQSRQSERQKDFL
QESDPAEAEGHPRKKHKCNTETLIPWLSVKPTSSTQKKSRIDLEVTGSASLARPTTVPEK
VRQGKLTMHNFLSGFASQPTDDSQNDGSLDVEDVEDAEVENDEEEGERVEIAEDTEERSD
DEMTVEQSVITPSPEVVTRVGKESNLSVANRDVGDDVTQVEDLDTLMDLSPAKQKHLASI
ILEVNETPQAEIIRSGGDNDVALRFDTDQVRSHWCKIAESASTHRSTLPHEDLEGLKDAG
LSNTNNEDKAAEVLSRIIDKSDFSEMELVGQFNHGFIITRRRKLDSSSSGVMDDLFIVDQ
HAADEKYNFETLQQTTNIQSQTLFRSRPLELTASEELVATENIDILRKNGFEVDVNETAL
PGNRLILTAQPVSKSTVFDAKDLEELINLMQDRPNGSMVRCSKARAMFAMRACRKSVMIG
TSLNRHQMLNIVRHMGTIDQPWNCPHGRPTMRHLADLWDVERQKKKVDWVRLITAL
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaacgatgttactcaatcttctattaaacctatagacaaaacatcagttcac
cgcatcacctctggacaagtcgtcatcgatatccaaaccgcagtcaaagaactcattgaa
aacagtttggacgcgggcgccaccaatattgatgtcagattcaaacagtatggtctaaca
agcatcgaagtggttgataatggctcgggaattgcggaaaaggaccatgaggttatcggt
ctgaaacaccacacttctaaactatccacatacactgatcttgcagaactacatacgttt
ggttttcggggagaagccttgtcttctttatgcgctctctgtcagtccgttcaggtaact
acatcaacacaatctcctgtcggatactgtttggacttggacgccggtggtagaatcaag
tctcaaaagacggtcgcgcgtccgaaaggtaccacagtgactctcaaaggcctattccaa
cctttaccagtgcgtcgaaaagaactcgaaaggaacattaagagagaattcgccaaagct
ttaggattgttgaatgcttatgctttgctaccttgtacggttgagcccgggattcgtcta
aatgtgtcaaatcaaccagataaaggtgcaaaatcgcaagtacttacgacacaaggtact
ccttcgatgagagcatctgtttctactctgtggggtccaaaagctctcgataatgtagta
gatctagacttgaggttggaagttgagagggaacggggaaataagagaaccatctctcaa
gctttgccattgaccgacgacgaaccgctgcaagtacgcgttcggggcttgatatctaaa
ttcagtgtttcgtgcggccgcacaggcactgacagacagtttttctatgtaaacggtcgg
ccgtgcacattgaacaaggttcagaaggcgttcaatgaagtctatcgttcattcaacccc
aatcaatcggcattcattgttgccgatttcgtcatccctactgctgcttgcgatgtcaac
gtgtcgccagataagcgtaccatatttttgcatagcgaaagtaatttgatcgccgctctt
aaggaagccctggagcgcaactttaatcccgagcgatcaacctttgaagtcacatcttcg
caagctaaaacagtacaaacaacactcaatgaagttacccagtcagtcaaggggacaact
accaacacatcgcgcccttgtcatcattcagattcttctgatgaccctaccgaagactcc
actatctctacctcgtcgcccaccattatttccacttcatctacgaatgacaactgcagt
gatcaaccatccatcgccgcctcgaaagttcctttattcattccggacccagacgatgat
attatcccggaatcagtggttgaggctccaagaaaccttggtcgagaattaccaattcct
catttaccagaaagatcagggcaccgtgacgatcagaaccaggaaattgaccaagaggtt
gtcattgacacgacacgggcatcatggaatcgacaacttccgtcatcgccggcaaccatg
tcgaaacagcgagttgacaacgaccaatctcgacagagcgaacgtcagaaagattttcta
caggaatcagatccggccgaagccgagggacaccctcgtaagaaacacaaatgtaacaca
gaaacacttataccctggttatctgtcaaacctacgtcgtcaacacaaaaaaagtcgagg
attgacctggaagtgacgggctcggcgtccttggcgcgtccaacaacggtgcccgaaaaa
gttcgccagggaaagttgactatgcacaattttttgtctggttttgctagtcagcctaca
gacgacagtcagaatgatggttcgctggatgtagaggatgtagaggatgcggaagttgaa
aacgacgaggaggaaggggaacgtgttgagattgcagaagatacggaagagcggtccgac
gacgaaatgactgtagaacaatcagttatcacgccaagtcccgaagttgtcactcgtgtt
ggcaaggagtcaaacctttccgtggcgaaccgtgatgttggcgacgatgtcactcaagtt
gaggacctcgacacgttgatggatttgagccctgcgaagcaaaaacatttggcctccatt
attctcgaagttaacgaaacgccgcaagcggagattattcgaagcggcggagacaacgac
gtggctcttaggtttgacactgatcaagtgagatctcattggtgcaaaatagcggaatca
gcttcgacacaccgatcaacactgcctcacgaggatttggagggcttaaaagatgctgga
ttgtccaatactaataatgaagacaaagcggccgaagttctctcgcggattatcgataaa
tctgatttttcagaaatggagcttgttggtcaatttaatcatggattcatcatcacgcgg
aggaggaagttggatagctcatccagtggtgtgatggatgatcttttcatagtggaccaa
catgcggcggatgaaaagtataattttgaaactcttcaacagacgacgaacattcaatct
caaacgctattccgatctcgaccgctcgagctgacagcgtcagaagagttggttgctacg
gagaatattgatattctcaggaaaaatggcttcgaggttgatgtgaatgaaaccgccctt
ccaggaaaccgactaatattaacagcacaacctgttagcaagagcactgtgttcgacgct
aaagacctggaagaactcattaatctaatgcaagatagaccaaacggctcaatggtccga
tgttcaaaagcgcgtgcaatgtttgccatgagagcttgtcgaaagagcgttatgattggc
acgtctttgaaccgacaccaaatgctaaatatcgttaggcatatgggtacaattgaccaa
ccgtggaattgcccacatggaaggccgaccatgcgacatctggctgacctatgggatgtg
gaacgacagaagaagaaagtagattgggtaaggctgattacggccctttga
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integrated database retrieval system