Agaricus bisporus var. bisporus H97: AGABI2DRAFT148968
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Entry
AGABI2DRAFT148968 CDS
T03140
Symbol
AGABI2DRAFT_148968
Name
(RefSeq) hypothetical protein
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
abv
Agaricus bisporus var. bisporus H97
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
abv03016
]
AGABI2DRAFT148968 (AGABI2DRAFT_148968)
Enzymes [BR:
abv01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
AGABI2DRAFT148968 (AGABI2DRAFT_148968)
Transfer RNA biogenesis [BR:
abv03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
AGABI2DRAFT148968 (AGABI2DRAFT_148968)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_endo
eIF3_subunit
Remorin_C
Motif
Other DBs
NCBI-GeneID:
18079235
NCBI-ProteinID:
XP_006458518
JGI:
Agabi_varbisH97_2_148968
LinkDB
All DBs
Position
Unknown
AA seq
316 aa
AA seq
DB search
MSADEQNSKIPLRVSNNTAYLWNVDDIAKLRSKHHICGILTGTLPHLSQQNAFLGIPLVL
LPEEVVLLVENGIAVLIDDPIAHAQPSLVEIESWNNEQQAVFRQQMVANEAKFAKQEQSR
SLSEDAIQKRKEREERRRLAAQKLAQDVNNDNGLFSVESEPVTKEATLATPQSSIPTGTY
TISIPASSEEYQWYSPHHATFSTIESAQKAGIWTYPSNLNERARCGVFRSLSEQGYFMGS
GVKFGGDYLVYPGDPLRYHSHFVATVIDSPTQTLRPMEIIAHGRLGTATKKSHLLCTWDD
EKKQVSYLSIEWASFG
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctgacgagcaaaattccaaaatacctctccgggtatctaataacacagcatac
ctctggaacgtcgacgatatagccaaacttcgcagcaaacatcatatttgtggtatccta
actggcactcttcctcatttatcgcaacaaaatgcctttttggggattcctctagtcctt
cttccagaggaggtcgttcttctagtggaaaatggaatagctgtccttatagacgaccct
atcgcccacgcacaacctagccttgtggaaatcgaaagctggaacaatgaacagcaagct
gtgtttcggcagcaaatggttgctaacgaggcaaaatttgcaaagcaggaacaaagccgg
tctctctcggaagatgcaatccagaaacggaaggaacgagaagaacgaaggcgtctcgca
gctcaaaaactcgcacaagatgttaacaacgacaatggcctattttccgtggagtccgag
cccgtgacaaaggaggcaacattggctacaccgcagtcatcaattcctacaggaacatat
acaatcagcatcccagcttcatcggaggaatatcaatggtattctcctcatcatgcaacc
ttctcgacaatcgagtccgctcaaaaggctgggatctggacgtatccttccaacttaaac
gagcgtgcaagatgtggcgtctttagaagtttatcggagcaaggttatttcatggggagc
ggggtcaaatttggaggcgattatctcgtgtatccaggtgatccgctgaggtatcactct
catttcgtggccacggtgatcgactcccctacacaaacacttcgaccaatggaaatcatt
gcccatggcaggttgggtactgctacaaaaaaatcgcaccttctatgtacatgggatgat
gaaaagaaacaagtttcatatctttcaatagaatgggctagtttcggttga
DBGET
integrated database retrieval system
