Agaricus bisporus var. bisporus H97: AGABI2DRAFT149277
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Entry
AGABI2DRAFT149277 CDS
T03140
Symbol
AGABI2DRAFT_149277
Name
(RefSeq) hypothetical protein
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
abv
Agaricus bisporus var. bisporus H97
Pathway
abv03013
Nucleocytoplasmic transport
abv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
AGABI2DRAFT149277 (AGABI2DRAFT_149277)
03015 mRNA surveillance pathway
AGABI2DRAFT149277 (AGABI2DRAFT_149277)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abv03019
]
AGABI2DRAFT149277 (AGABI2DRAFT_149277)
Enzymes [BR:
abv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AGABI2DRAFT149277 (AGABI2DRAFT_149277)
Messenger RNA biogenesis [BR:
abv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
AGABI2DRAFT149277 (AGABI2DRAFT_149277)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
18079246
NCBI-ProteinID:
XP_006459051
JGI:
Agabi_varbisH97_2_149277
LinkDB
All DBs
Position
Unknown
AA seq
480 aa
AA seq
DB search
MEKDADGFYNPGISLLSPLFLAHSHTNPPVEPTPETKDKPAEEVAKDGETKTSLDSDLIN
STFDVNVTLADQQGNPDSPLYSAKTFEELGLHADLLKGIYDMGFSKPSKIQERALPLLLS
NPPTNMIGQSQSGTGKTAAFVLTMLTRVDFDLHKPQALCLAPSRELARQIMSVVIQMGKF
TSVQTEYAIKDNLPRDATSVTAQIIVGTPGTMTDLIRRKVIDVTNVKVFVLDEADNMLDQ
DGLGDQTLRVKNMIPRGIKMQIILFSATFPDNVRRFASKFATDANKIELRRNELSVSNIR
QFYMDCRDEEHKYDILVSLYSLLTIGQSIIFCKHRHTADRISQKMTAEGHKVASLHGAKD
ATERDSIIDAFRQGKDKVLITTNVIARGIDILQVNMVVNYDIPLMNERGKDSNEPDVETY
LHRIGRTGRFGRKGISINFVHDQKTWSYMNQIEQVLGKEIIRIETNDLNEMEQKMKKVLK
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggacgcagacggtttctacaatccaggtatctccctcctaagtcctctcttt
cttgctcattctcacacgaatcctccagttgaacccaccccagagaccaaagacaagcca
gccgaggaggtcgccaaggatggcgagacgaagacgagcctcgacagcgatctgatcaac
tcgactttcgatgtcaacgtcacccttgctgatcagcagggaaacccagattccccgctc
tacagcgcaaagacctttgaggaactcggcctgcatgcagatctactcaaaggcatctac
gacatgggcttttcaaaaccctcaaagatccaagaacgcgccctccctctcctcctctcc
aatcccccaactaacatgatcggtcaatcgcagtccggcacgggcaagacagcggcattt
gttctaaccatgttaactcgcgtagactttgatctccacaaacctcaagctctgtgtcta
gccccgtctcgtgaacttgcccgacaaatcatgtctgtagtcatccagatgggcaaattc
accagcgtgcaaaccgaatatgcgatcaaagataatctaccaagggacgctaccagcgtt
accgcgcagatcattgtcggcacaccgggaactatgactgatctcattagacgcaaggtt
attgatgtcacgaatgtcaaggtttttgtgctcgacgaggcagataacatgttggaccaa
gatggattgggtgatcagaccttgcgggtcaaaaatatgattcctcgaggaattaaaatg
caaatcattctcttttctgcgacattccccgacaatgtccgcagattcgcatctaaattc
gctaccgacgcaaacaaaattgaacttcggaggaatgaactgagcgtcagcaatatccga
caattctacatggattgtcgagatgaagaacataaatatgatattcttgtttcgctatat
tcgttgttgactattgggcagagtattatattctgcaagcaccgacatacagcagatagg
atatctcaaaaaatgactgcggaaggacataaagttgcttcgttacatggcgcaaaagat
gctactgaacgtgattccattatcgatgctttcagacaaggaaaagacaaggtcctcatc
acgaccaacgtcatagctcgtggtatcgacatccttcaagtcaacatggttgtcaattat
gatatcccattgatgaatgaacgtggaaaagatagtaatgaacctgatgtcgaaacgtat
ttacatcgtatcggtcgaacgggaaggtttggacggaaagggatttctatcaattttgta
catgatcagaaaacgtggtcgtatatgaatcagattgaacaggtgttggggaaggagatt
attaggattgagacgaatgatttgaatgagatggaacaaaaaatgaagaaggtgttgaag
tag
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integrated database retrieval system
