Agaricus bisporus var. bisporus H97: AGABI2DRAFT152119
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Entry
AGABI2DRAFT152119 CDS
T03140
Symbol
AGABI2DRAFT_152119
Name
(RefSeq) hypothetical protein
KO
K12856
pre-mRNA-processing factor 8
Organism
abv
Agaricus bisporus var. bisporus H97
Pathway
abv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AGABI2DRAFT152119 (AGABI2DRAFT_152119)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
abv03041
]
AGABI2DRAFT152119 (AGABI2DRAFT_152119)
Spliceosome [BR:
abv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
AGABI2DRAFT152119 (AGABI2DRAFT_152119)
Complex C
U5 SnRNP specific factors
AGABI2DRAFT152119 (AGABI2DRAFT_152119)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
RRM_4
PROCT
JAB
Corona_5a
Motif
Other DBs
NCBI-GeneID:
18079356
NCBI-ProteinID:
XP_006462688
JGI:
Agabi_varbisH97_2_152119
LinkDB
All DBs
Position
Unknown
AA seq
2352 aa
AA seq
DB search
MSFPPPPPGFMPPPPPGMPPQNNASSSRMPPEVIAQKTQKWVQMQRKRYGEKRKGGYVDM
GKQDLPPEHVRKIIKDHGDMSNRKFRNDKRVHLGALKYVPHAVMKLLENIPFPWEQVREV
PVLYHITGAITFVNEIPRVIEPVYHAQWSTMWLAMRREKRDRRHFKRMRFPPFDDEEPPL
DYGDNVLDVEPLEAIQLDLDEDEDAAIIDWFYDAKPLIDTKSVNGSSYKYWSLSLPEMAN
LYRLGRTLLSDQADKNASYLFDKKSFFTAKALNMAIPGGPKFEPLYRDMDAFDEDWNEFN
DINKVIIRQQIRTEYKVAFPHLYNSLPRSVHISPYHYPKNVYIRTDDPDLPAFYFDPLIN
PISLRGFTQKNAPLVSHEDSVFGPNGADDDEFKMPEGLEPFLKEKDLENDLTAEGIALWW
APEPYNRRSGRMRRAQDIPLVKGWYLEHCPPNQAVKVRVSYQKLLKCFVLNELHTRPEKA
MSKKNLFRQLKTTKFFQTTRLDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNMNLKP
VKTLTTKERKKSRFGNAFHLCREILRLTKLVVDAHVQFRLGNVDAFQLADALQYIFSHIG
ALTGMYRYKYKLMRQVRMTKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGIVP
LLERWLGNLLARQFEGRNSKGIAKTVTKQRVESHFDLELRAAVMHDILDMMPESIKQNKS
KTILQHLSEAWRCWKANIPWKVPGMPTAIENIILRYIKSKADWWCSVAHYNRERIRRGAT
VDKAVVKKNLGRLTRLYLKAEQERQNAYLKDGPYISAEEAVAIYTATVHWLESRKFSPIP
FPPLSYKHDTKLLVLALEKLKEAYSVKGRLNQSQREELALIEQAYDNPHECLSRIKRLLL
TQRAFKESGIEFFDTYDKLIPCYDIEPVEKITDAYLDQFLFFEADKRGLFPAWVKPADTE
PPPLLVYKWCQGINNLTDIWETSEGECVVMMETVLSKVYEKIDLTLLNRLLRLILDHNLA
DYITAKNNTVLTYKDMAHTNAYGLIRGLQFSAFVFQYYGLVLDLLILGLQRASEMAGPPQ
LPNNFLQYRDSSTETRHPIRLYSRYVDRLHILFRFSADEARDLIQRYLSANPDPTNNNVI
GYNNKRCWPRDCRMRLIKHDVNLGRAVYWNIKQRLPRSLTTIEWENTFVSVYSQNNPQLL
FSMSGFEIRILPKIRTISGEQFSLKDAVWNLTNEQTKERTAQAFLRVSDDGVQQFNNRIR
QVLMSSGSTTFSKIVNKWNTALIGLMTYYREAVIHTNELLDALVKAENKIQTRVKIGLNS
KMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVAVTHFRAGMSHEEDQLI
PNLYRYLQPWEAEFLDSARVWSEYSMKRKEANAQNRRLTLEDLEDSWDRGIPRINTLFQK
DRHTLAYDRGWRVRTDWKQYQLLKHNPFWWTSQRHDGKLWQLNNYRVDVIAALGGVEGIL
EHTLFKGTYFPTWEGLFWEKASGFEESMRYKKLTNAQRSGLNQIPNRRFTLWWSPTINRA
NVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVFDQELEPLQ
IETVQKETIHPRKSYKMNSSCADILLFSSYKWNISRPSLVTDAKDVLDGTTSNKYWIDVQ
LRWGDFDTHDIERYTRAKFLDYVSDSMSIYPSPTGVMIGMDLAYNLWSAYGNWFPGMKPL
IQQAMAKIMKANPACHVLRERIRKGLQLYSSEPTEPYLNSQNYSELFSNQIIWFVDDTNV
YRVTIHKTFEGNLTTKPINGAIFIFNPRSGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEV
AALVRSLPVEEQPKQVIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACMKMEKFGDL
ILRATQPQMVLFSLYDDWLKSISSYTAFSRLILLLRGLHVNNEKAKVILHPDKSTITEPH
FVWPSLSDEEWIKVEVAMKDLILQDFGKRNSVNIASLTVSEIRDIILGQEIAAPSVQRQQ
MAELEKSTEAQSQVTAVQTQTTNVHGDTIQTVTTTNYEQQTFSSKSDWRVRAISATHLAL
RLQHIYVSNDDVKDDAGSFTYVLPKNILRAFVTASDLRTQVVAFLYGVSPIDNKQVKEIK
AVAWVPQRGSNNNVELPSNLPKDDFLLKDLEPLGWIKTQSLEIPHLSPTDVTTQAKLMAE
HPEWGSSSICITTSFTPGSVSLSAHSLTVAGFEWGRKNQDTSANPPGFNPNMSERVQLLL
SDRILGMTLVPEGKVWNYGIGLTQMWTPNMGYSMTLDTPLLFWAEEHRPAAFLTFANLEQ
GEDSADVENSFA
NT seq
7059 nt
NT seq
+upstream
nt +downstream
nt
atgagttttcctcctcctccgcccggttttatgccaccccctccaccaggcatgccgcct
caaaataacgcttcgtcttcgcgtatgccacccgaagtcatcgcgcagaaaactcaaaaa
tgggtgcaaatgcagagaaagcgatatggcgagaaacgcaaaggaggctacgttgatatg
ggcaagcaggatctccctcctgagcatgtccgaaaaatcatcaaagaccacggagacatg
agtaatcgcaagttcagaaacgacaagcgcgttcatctcggtgccctcaagtacgtccct
catgccgttatgaagttgttggaaaacatcccattcccttgggaacaagttcgcgaagtt
cctgtgctctaccatatcactggcgccattacattcgtgaacgagatacctcgtgttatt
gagcccgtctatcatgcacaatggagcacgatgtggcttgctatgcgtcgagagaagagg
gaccgccggcacttcaaacgtatgcgtttccctccgtttgatgatgaagaacctcctttg
gactacggggacaacgtactcgacgtcgaaccgctagaagctatccaattagatttagat
gaagatgaagatgccgcaatcatcgactggttttatgacgcgaagcccctcattgacacg
aagtccgtgaatggatcatcttacaagtactggtcactatccttaccggagatggccaac
ttgtatcgtctcggtcgtaccctcctttcggaccaggccgacaagaatgccagctacttg
ttcgacaaaaagtcatttttcactgccaaggcgctcaacatggccataccgggaggaccc
aagttcgaacctctataccgggacatggatgcttttgatgaagattggaatgagtttaac
gatataaacaaagtcatcattcggcagcaaattcgcacagagtacaaagtcgctttccct
cacctttacaactccctccctcgttctgtgcatatttcaccttatcattaccccaagaac
gtctacatccgtactgatgatcctgacctacctgctttctacttcgatcctctcattaac
cctatatcccttcgtggtttcacccaaaaaaatgcaccactggtctctcatgaggatagc
gttttcggcccgaatggtgcagatgatgatgaatttaagatgcccgaaggactggaacct
ttcctcaaggagaaggatctcgagaatgacctcaccgctgaaggcattgctctttggtgg
gcacccgaaccgtataatcgtcgttctggtcgtatgcgtagggctcaagatattccactt
gtcaagggttggtatctcgagcactgtcctcccaaccaagctgtcaaggtccgcgtttcg
tatcaaaaactgctcaagtgtttcgtcctcaacgaattgcatacgaggccggagaaggcg
atgtcgaagaagaacttgttccgtcaacttaagactaccaaattcttccagactacgagg
ctggactgggttgaggctggactccaagtctgcagacagggatataacatgctgaacctt
ttgattcatcgcaagaatttgaactacctccatcttgactataatatgaacctgaaacca
gtcaaaactcttacgactaaggaacgtaagaaatctcgattcggaaatgctttccacttg
tgtcgcgaaattcttcgccttaccaagcttgtcgttgatgctcacgttcaattccgtctt
ggcaacgtcgatgccttccagctggctgatgcacttcaatatatctttagccacattggt
gctttgacgggtatgtaccggtacaagtacaagttgatgagacaagtacgcatgaccaag
gatttgaagcacttgatctactatcgctttaacacaggccctgtcggtaagggtcctggc
tgtggattttgggcgcccggctggcgcgtctggcttttcttcatgcgtggtatcgtcccc
ttacttgagagatggctaggaaacttgctcgctcgtcaatttgaagggagaaacagcaaa
ggcattgccaagactgtcaccaagcaacgcgtagagtctcacttcgatcttgaattgcgt
gctgctgttatgcacgatatccttgacatgatgcctgaatctatcaagcaaaacaaatcg
aagactattttgcaacatttgtctgaggcttggaggtgctggaaagctaatatcccttgg
aaagttcctggtatgccaactgccatcgaaaacatcattctacgctacatcaagagcaag
gccgattggtggtgttcggttgcacattataatcgtgaacgtatccgtcgtggtgccact
gtcgacaaggctgttgtgaagaagaaccttggccgtttgacgcgtctttacctcaaggct
gagcaagaacgccagaatgcctacctcaaagatggtccttacatcagtgctgaagaggcc
gtcgctatctatactgccactgtccactggttggaatctcgcaaattctcaccgatcccc
ttccctcctttgtcatacaaacatgataccaaactgctcgtccttgccctcgagaaactg
aaagaggcatactcggtaaaaggccgtttgaaccagtctcaaagagaagaacttgccttg
atcgagcaagcatatgataatccacatgaatgcctttctcgcatcaaacgtcttttgctc
acccaacgtgctttcaaagaatctggcattgagtttttcgatacttatgacaagcttatc
ccttgttatgatattgagcccgttgagaagattactgatgcttatcttgatcaattcttg
ttctttgaggctgataaacgtggacttttccctgcatgggtcaagccggctgacacggag
cctccaccattgcttgtctataaatggtgtcagggcatcaacaacctgacagacatttgg
gaaaccagtgagggtgaatgtgttgttatgatggagactgtcctgtcgaaagtttatgag
aagattgaccttactcttctcaaccgcctgctacgcctcattctcgatcataacctagcg
gactacataactgctaagaataacactgtcctgacctacaaggacatggcgcataccaat
gcttatggtcttatcagaggtcttcaattttctgctttcgtcttccagtactatggtttg
gtcctcgatcttcttatcctcggtctccaacgtgcgagtgagatggcaggccctccgcaa
ttgcctaacaacttcctccagtaccgtgactcatctacggagacgcgtcaccctatccgt
ctctattcgcgctacgtggacaggttgcatatcctcttccgcttttcggctgatgaggct
cgcgatctgatccaacgttacctttctgcgaaccctgatccaaccaacaataatgtcatc
ggttacaacaacaaacgttgctggcctcgggattgccgtatgagactcatcaaacacgat
gtcaacctcgggagagcagtttactggaatataaagcaacgtcttcctcggtcgttgacg
acaatcgagtgggagaatacatttgtcagcgtctactcgcaaaacaacccccagctcctc
ttctccatgagtggtttcgagatacgcatcttacccaagatcaggaccatctccggagag
cagttctccctcaaagacgccgtttggaatctcaccaacgagcaaacgaaggagcgtacc
gctcaagcatttttacgtgtatcagacgacggtgttcaacagtttaataaccgtatccgt
caagtgcttatgagctccggttcgacaactttctccaagatcgtcaataaatggaacacg
gcgttgatcggtttaatgacgtactatcgagaggcagtcatccataccaatgaactctta
gatgcactcgtcaaggccgagaacaagattcaaactcgtgtcaaaattggtttgaatagt
aagatgccttcgaggttccctcctgttgtattctatactcctaaggaactcggtggtctg
ggaatgttgtcgatgggccatgttttgattcctcaaagcgatcttcggtggtcaaagcag
accgacgttgccgttacccacttccgcgctggtatgtcacatgaggaagaccagctgatt
cccaacttgtatcgctatcttcaaccatgggaggccgaattccttgattctgctcgcgtt
tggtcagagtattctatgaagaggaaggaggctaatgcacagaaccgtcgtctgaccctg
gaagatttggaagacagttgggatcgtggtatccctcgtatcaatactcttttccaaaag
gataggcacacattggcctatgatcgtggatggcgtgtacgcacagattggaagcagtat
cagttgctcaagcacaatccattctggtggacatcgcagcgacatgatggaaaactttgg
caactcaacaattaccgtgtagatgtcattgctgctcttggtggtgttgaaggtattctt
gaacacactttgttcaaaggaacatatttccccacttgggagggtctcttctgggagaag
gcatctggattcgaggagtcgatgaggtataagaaactgaccaacgcgcaacgttccggt
ctgaatcagattcctaatcgtcgatttacactctggtggagtcctacgatcaaccgtgct
aacgtatatgttggtttccaagtgcaactcgatctcactggtattttcatgcacggaaag
attccgacgttgaagattagtttgattcaaatattccgtgctcacttgtggcagaagatc
catgagagtgttgttatggatttatgtcaagtcttcgatcaggaactcgagcctctccaa
attgaaaccgttcagaaggaaacaattcacccccgaaagagttacaagatgaactcatct
tgcgctgatattctactgttctcttcatacaagtggaatatctctcgtccgtcattggtc
acagatgctaaggatgttcttgatggaactacgagcaacaagtactggattgacgttcag
ctccgttggggtgatttcgacacccatgatattgaacgatacacccgagcgaagtttttg
gactacgtttctgattctatgagcatttatccctctcccaccggtgttatgattggtatg
gacttggcttacaacttgtggtcagcctatggaaactggttcccggggatgaaacccctt
attcaacaagctatggctaaaatcatgaaggccaatcccgcctgccacgtacttcgtgaa
cgtatccgcaaaggtctccagttatattcatctgaaccaacggaaccatacctcaacagc
caaaactactccgagttgttctctaatcaaatcatctggttcgttgacgataccaacgta
tacagagttacgatccataagactttcgaagggaacttgaccaccaaacccatcaatggt
gctatatttatcttcaaccctcgttccggacagttgttcttgaagattatccacaccagt
gtctgggctgggcagaagcgtctgggtcaattggctaagtggaaaactgctgaagaagtc
gccgcgcttgttcgctccctccctgttgaagagcagcctaagcaggtcattgtcacccgt
aagggcatgcttgacccccttgaggtccatttgcttgatttcccaaacatcgttatcaag
ggaagtgagctacaactgcccttccaagcttgcatgaagatggagaaattcggtgatctg
atcttacgtgccactcaacctcagatggtgctattcagcctctatgatgactggctcaaa
tctatctcaagctataccgccttttctcgtctcatcctgcttcttcgtggactgcacgtc
aataatgagaaagccaaggttattctccatcctgacaaatccacgatcaccgagccgcat
ttcgtgtggccttctctttctgacgaagaatggatcaaggtcgaagttgcgatgaaggac
ctcattcttcaggactttgggaagcggaacagtgtcaacattgcctcattgacagtcagc
gaaattcgtgacatcatcctcgggcaagagatcgcagcaccatccgttcaacgtcaacaa
atggctgagcttgagaagagcaccgaagctcaaagtcaggtgacggctgttcaaactcaa
accaccaacgttcatggtgacactattcaaactgtcactacgaccaactatgaacaacag
actttcagtagcaaatctgactggcgtgtacgcgcgatttctgccactcaccttgccctc
cgtctgcaacacatctacgtctccaatgatgacgtgaaggatgacgctggctcctttacc
tatgtccttcccaaaaacattctgcgtgcctttgtcactgcgtcagaccttcgaacacag
gtcgttgccttcttgtatggtgtctccccaattgacaacaagcaagtcaaagagataaag
gctgttgcttgggttcctcaacggggtagtaacaacaatgtcgagcttccatctaatcta
cccaaggatgacttccttctcaaagaccttgaacctcttggatggatcaagactcaatcg
ctcgaaattccacacctatcacccaccgatgttacgactcaagctaaactcatggctgaa
catcccgaatggggatcgtcgtctatctgtatcacgacctccttcacgccgggttccgtg
tcactatcggctcattcgctgaccgttgctgggtttgagtggggtaggaaaaaccaggac
acgtcagctaatccgccaggctttaaccctaatatgtcggagcgtgtgcaacttttgctg
tctgatcgtattctcggtatgacactggttcccgaaggaaaagtctggaattatggtatc
ggtctcactcagatgtggacgccaaatatgggctatagcatgactcttgatacgccatta
ttattctgggcagaagagcaccgacctgccgccttcttgacatttgccaacttggaacaa
ggcgaggatagtgctgatgttgaaaatagctttgcataa
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integrated database retrieval system
