Agaricus bisporus var. bisporus H97: AGABI2DRAFT176563
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Entry
AGABI2DRAFT176563 CDS
T03140
Symbol
AGABI2DRAFT_176563
Name
(RefSeq) hypothetical protein
KO
K11292
transcription elongation factor SPT6
Organism
abv
Agaricus bisporus var. bisporus H97
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abv03021
]
AGABI2DRAFT176563 (AGABI2DRAFT_176563)
03036 Chromosome and associated proteins [BR:
abv03036
]
AGABI2DRAFT176563 (AGABI2DRAFT_176563)
Transcription machinery [BR:
abv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
AGABI2DRAFT176563 (AGABI2DRAFT_176563)
Chromosome and associated proteins [BR:
abv03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
AGABI2DRAFT176563 (AGABI2DRAFT_176563)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_9
SH2
S1
HHH_3
Motif
Other DBs
NCBI-GeneID:
18079566
NCBI-ProteinID:
XP_006458071
JGI:
Agabi_varbisH97_2_176563
LinkDB
All DBs
Position
Unknown
AA seq
1522 aa
AA seq
DB search
MSSPQPEQFRVNQAEETDDPMQGLGQEGEEGEGDEIAPNLTDDSSEEGEDDEEEARRIRE
GFIVDEDEDEEEDEEKEERRRRRKRRKKHHRRREEEEEELEEDDLELLAENTGGTFKKSR
LTRLRRGRVSQSPPTTSSRRRTVVESSDEDLDNDDNLPQVQDIQKIWDDERGRDDEEEYG
DMDMDDFIEYDEEGGGAMDEASRAERRREQQELQRRKRALGIRTELGGIDANAWDEIHDV
FGDGHDYDWALAGEEDIEQDEEHLKADTKYQDVFEPSEIKKRMLTEDDDIIRAQDTPERM
QLATSSMSYSTTLSMHTPLTEADLDGAAMWVTQRISARKNREYFSNDGQSRHLRGALVMA
VTFALRYLFVEEFEVPHIWAHKRDYLCHFDISDIRTRRELLSLNELWRIFVMGQKYRSLL
ERKRVLSTLYERLQVHDEVYEKEIFPRVDSVELVADSTEWLLLKYKEKKGDAFEFRSREE
EESDIRKPKMPSRISAYEVAKNTVVSKLAEGFGLEPYQVVANFIASERLYFVQDQELNPT
IYAEQFADPDPVKVQTPEGLLRRARLILSTELGKDPQLRDHIRKIFKEDAQITVEPTERG
IVKIDQNHPYNNFKYLLRKPIRDMLESAQFLHILAAEAEHLVTVSIFLPNELKADFEQKL
SNAFSSDNFNEAARAWNIERNQVVQDAIEQHLILLGAKWAREYLREEVEDFLAQSCAAKL
RKRLNVAPYITSAMKAGDTSSVLAVSWGKGDPQKDAISIVFLDEAGRMREHTKVDNLYDS
DNVDEFIDLLKRRKPDVIVIGGFSMATLKLSQRVKEVIRGGNSQIPGQESSWGQVTDVPV
IYVYDDVARMYQHSHRAAEEFGGLSSTAKYCVGLARYTQSPLNEFAALGRDITAITFEED
DQHLVPIDKLLLVFERALVDITNKVGVDINRAVTDSYYQHLLPFVCGLGPRKAQALVKKI
GALGGTLVNRTQFINNSLLTTKIFMNASAFLRIAREDNEMRTFKNRRDDGDAPDPLDDTR
IHPEDYELARKMATDALELDEEDIHDEHPSHVVTLIMNDADNEKKLMELNLDEFAISLYQ
ANYDQKRHTLNVIRDELLKSYAEQRDAFLLPQDMEVVTMLSGETERTLRHGLMVSAVVYR
TARNMAFVRLDSGVEGVITSKSLSDNNAQVESFLRKGQTISGIIIHRTIDIAHDIFNVEL
SCQRQLLEERDDEIRKVRPDIYYDAVREDKDRDMLNRKKRAETDRSRRVIKHPNFHNFKA
AQAEVFLEKQQRGDVVIRPSSKGIDHLAVTWKVDDGLYQHIDVTDSNADPSGQTTGQLIV
DSKFTYADLDELIVNHIQAMARRVEELMAHEKFKQGPEDELHLFLKNSLAANPAKSMYGF
TLNRKKPGHFNLCFLANKNSTVQTWPIRVSPEAYFLFEAAAVGVPELCDAFKVRHLHESK
NTSGSKTPFAGGRTPARLGGATPGHASARHVGRTPNPYGGQTPYGAGPLPPQQTQPQPPP
QHAHPYLPSAYGYQTPMQRPPP
NT seq
4566 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcaccccaaccagagcaattccgcgtaaatcaggctgaagaaacagatgatccc
atgcaaggtttaggccaggagggggaggaaggagagggtgatgagatcgccccgaatttg
acagatgacagctccgaggagggagaagatgatgaggaggaggcccgtcgaatcagagag
ggctttatcgttgacgaggatgaagacgaagaagaggacgaagagaaagaagaacggcgg
cggcggcgaaagaggcgcaagaagcatcaccgcagacgtgaagaagaagaggaagaacta
gaggaggatgatttagaactactggctgaaaatactggtggtacattcaaaaagagccga
ctcactcgacttaggcgcggacgcgtgtcacagtcgccaccgaccacgtcttctaggcga
agaaccgtggtggaatcctctgacgaggaccttgataacgacgacaatcttcctcaagtc
caagacattcaaaaaatctgggatgatgagcgtggtagagacgatgaagaggaatacggt
gatatggatatggatgactttatcgagtatgatgaagagggaggtggtgctatggatgaa
gcgtctcgtgccgaacgcaggagagaacaacaagagctacagagacgcaaaagagcattg
ggtatccggaccgagcttggcgggattgatgctaatgcatgggatgaaatacatgatgta
tttggggatggccatgactatgattgggcactagctggggaagaagatattgagcaagat
gaagagcatctgaaagctgacacgaagtatcaagatgtgtttgaaccgtcagaaatcaag
aaacgcatgctcacagaagatgacgacattatacgagcgcaggatacgcctgagcgtatg
caactcgcaacttcttcaatgtcgtacagcaccacgctttccatgcatacaccactaacc
gaagccgacctcgacggtgctgctatgtgggtcacgcagcgcatttcagcacgcaagaac
cgcgagtattttagcaacgatggccaatcccgacatctgagaggcgcccttgtcatggct
gtcacatttgctttgcgttatcttttcgtcgaggagttcgaagttcctcacatatgggcg
cacaaacgagattatctttgtcacttcgatatctctgacattcgcactcgcagggagctc
ttgtctttgaatgaattatggcgaatctttgttatgggccaaaaatacagatcgctacta
gaacggaaacgagttttgtctacgctctacgaacgtcttcaagttcacgacgaagtctac
gagaaagagatctttccccgagtggacagtgttgagcttgtggctgatagcactgagtgg
ctccttttgaagtacaaggagaaaaagggtgacgcattcgaattccgttcacgtgaagaa
gaggagtcggacatcaggaagccgaaaatgcccagtcgtatctcggcatatgaggttgca
aaaaataccgtggtatcaaagttagcagagggatttgggctggaaccgtatcaagtagtg
gcgaattttatcgcgtcggagcgcctctactttgttcaagaccaggagttgaatcccact
atctacgctgaacaatttgccgatcctgaccctgtcaaggttcaaacgccagaagggctt
ctcagacgcgctcgactaatactgtcaacggaactcggcaaggatcctcaattgagagat
catattcgtaaaatcttcaaagaagatgcccaaatcactgttgagccgacggaaaggggc
attgtcaaaattgaccagaaccatccatataataattttaaatatcttctccggaagcct
attcgagatatgctagagtctgctcaatttctacatatcctcgccgcagaagctgaacat
cttgtgaccgtctcgatatttcttcccaatgaattgaaagcggatttcgaacagaaactc
agcaatgccttcagttctgataactttaatgaagctgcaagagcatggaatatcgaacga
aaccaagtggtccaagatgccattgaacagcatctcattctccttggtgcgaagtgggcg
agagagtaccttcgggaagaagtcgaagatttccttgcacagagctgcgctgctaaacta
cggaagcgtctcaacgtcgccccctacattacatctgcaatgaaagctggcgacacttca
tcggttcttgctgtgtcctggggaaagggtgatcctcaaaaagatgccatctcaattgta
ttccttgacgaagcaggacgtatgcgcgagcataccaaagttgacaacttatatgattct
gacaacgttgacgaattcatcgatttactcaaacgtcggaaaccagacgttatagtgatt
ggcggtttcagtatggcgacattgaagcttagtcaaagagttaaagaagttatacgaggc
ggaaattcgcaaattcctggccaggagtcaagctgggggcaagtcaccgatgttcctgtc
atctacgtctacgatgatgtcgcacgaatgtaccaacatagccatcgcgccgccgaagaa
tttggcggactttcttcaaccgcaaaatactgcgttggtctggctcgatatacccagagt
cctttaaatgaattcgctgcattgggccgggatatcactgccattacttttgaagaagat
gaccaacatctcgttcctatagacaagcttcttctggtgtttgagcgggctcttgttgat
atcacaaacaaagtaggtgtcgatattaatcgcgcagttacggacagctactatcagcat
ttgcttccgttcgtctgtggtttgggtcctagaaaagcccaagctttggtgaagaaaatt
ggtgctttgggagggacactcgtcaatcgcactcaattcatcaataacagtttacttacc
accaaaatcttcatgaatgcttctgccttcctgcggattgctcgtgaagataacgagatg
cgtaccttcaagaatcgtcgcgatgacggcgacgcccctgatcctctcgacgatacccgg
attcatcccgaagattacgagctggccagaaaaatggccacagacgcactcgaactagac
gaggaagatattcacgacgaacacccatcacacgtcgtcacactgattatgaacgatgca
gacaacgaaaagaagcttatggagctcaatctggatgagtttgcaatcagtctataccag
gcaaattatgatcagaagcgacatacgctcaacgtcatccgggatgaacttctcaaatcg
tatgcggaacagcgtgatgcgttcctgttaccacaggacatggaagtcgtcaccatgctt
agcggtgagaccgaacgaacattgaggcacggtctcatggtttcggcggtcgtgtatcgt
accgctcgaaacatggcctttgtccgccttgattccggtgttgaaggtgtcattacgtcg
aagagtctttcggacaataatgctcaagtcgagtctttccttcgaaagggccaaacgatt
tccggcatcatcattcatcgaaccatcgatattgcccatgatatattcaacgtggagctc
tcttgccaacgccagttgcttgaagagcgagatgatgagattcgtaaggtcaggccggat
atatactatgatgctgttcgagaggacaaagatagggacatgctcaatagaaagaagaga
gctgagactgatcgcagtcggcgggtgatcaaacatccgaacttccataacttcaaggct
gctcaggctgaggtgttcctggagaaacagcaacgcggagatgtcgttatcaggccttct
tccaagggcatcgatcatctcgctgtaacgtggaaggtggacgacggtctttatcaacat
attgatgtgacagactctaatgccgatccgtctggccagacgactggccaactcattgtg
gattccaaatttacgtacgctgacttggatgaactgatcgtcaaccacatccaagcaatg
gctcgtcgagtcgaagaattgatggcgcatgaaaaattcaagcagggaccggaagacgaa
ctacatctcttcctcaagaactccttggccgctaatccagcaaagagtatgtatggtttc
accctgaatcgtaagaagcctggacatttcaatctgtgcttcctcgccaacaagaattcc
actgtccaaacttggcctatccgtgtcagcccagaagcctactttctttttgaagccgcc
gctgtcggtgttcctgaactgtgtgatgctttcaaagtgcggcacctacatgagtctaag
aatacgtccggaagtaaaacaccttttgcagggggacgtacgcccgctcgtttgggtgga
gcaactcctggtcatgcatctgctcgacatgttggtcgcacgccaaatccttatggtgga
cagacaccttacggtgctggtccgctaccgccacagcaaacacaaccacaaccgccgcca
cagcatgcgcatccttacctcccctcggcctatggctatcaaacgccaatgcaacggccc
ccaccc
DBGET
integrated database retrieval system
