KEGG   Agaricus bisporus var. bisporus H97: AGABI2DRAFT183219
Entry
AGABI2DRAFT183219 CDS       T03140                                 
Symbol
AGABI2DRAFT_183219
Name
(RefSeq) hypothetical protein
  KO
K10844  DNA excision repair protein ERCC-2 [EC:5.6.2.3]
Organism
abv  Agaricus bisporus var. bisporus H97
Pathway
abv03022  Basal transcription factors
abv03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:abv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    AGABI2DRAFT183219 (AGABI2DRAFT_183219)
  09124 Replication and repair
   03420 Nucleotide excision repair
    AGABI2DRAFT183219 (AGABI2DRAFT_183219)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:abv03021]
    AGABI2DRAFT183219 (AGABI2DRAFT_183219)
   03036 Chromosome and associated proteins [BR:abv03036]
    AGABI2DRAFT183219 (AGABI2DRAFT_183219)
   03400 DNA repair and recombination proteins [BR:abv03400]
    AGABI2DRAFT183219 (AGABI2DRAFT_183219)
Enzymes [BR:abv01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     AGABI2DRAFT183219 (AGABI2DRAFT_183219)
Transcription machinery [BR:abv03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     AGABI2DRAFT183219 (AGABI2DRAFT_183219)
Chromosome and associated proteins [BR:abv03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    AGABI2DRAFT183219 (AGABI2DRAFT_183219)
DNA repair and recombination proteins [BR:abv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     AGABI2DRAFT183219 (AGABI2DRAFT_183219)
SSDB
Motif
Pfam: DEAD_2 HBB Helicase_C_2 ResIII DEAD nSTAND3
Other DBs
NCBI-GeneID: 18080351
NCBI-ProteinID: XP_006458132
JGI: Agabi_varbisH97_2_183219
LinkDB
Position
Unknown
AA seq 792 aa
MKFFIDNLPIIFPYDRIYPEQYAYMCDLKRTLDATGHCVLEMPSGTGKTVSLLSLIVSYQ
QFYPTKRKLIYCSRTVPEIEKALTELKRLMKYREEAAESEEEKIKERNYMGLGLTSRKNL
CINPEVSREKKGKVVDARCRDLTNSAVCEKGRADPGSVELCDWHENLGKMEPGHLMPAGI
WTLADVLDYGKEQRICPYFAVRRMMPFVDAVIYSFHYLLDPKVAEQVSKEMSKDSIVVFD
EAHNIDNVCIESLSIDLTRPMLDSAVRSVTKLGEKIEEVKTTDAAKLQDEYAKLVEGLQE
PDDSDTDNALANPVLPEDILKEAIPGNIRKAEHFVAFLKRFVEYLKTRMRVLHVVAETPL
SFLQHLKDITYIERRPLRFCAERLQSLIRTLELSRLDEHSSLQKVATFATLVATYEKGFL
LILEPFETDNATVPNPIFHFTCLDPSLAIKPVFERFSSVVITSGTISPLDMYPKMLQFTP
VVQETYSMTLTRNAFLPLVITRGSDQVAISSRFEVRNDPAVVRNFGSILVEYSKIVPDGI
VAFFPSYLYMESIVAAWNDMGILNEVWKHKLIFVETPDANETSIALENYRRACDNGRGAV
LLSVARGKVSEGIDFDHNYGRAVLMFGVPYQYTESRILKARLEYLRDAYRIRESEFLGFD
AMRNAAQCVGRVLRGKTDWGLMVFADKRFARADKRAKLPRWINQYITETASNLSTDMAIT
LSKLFMRTISQNPNENQTGVSLWALEDIEKAQAKQKALASLQEQVDEDDMDEDDKYDDGG
IDDQALMSLDIA
NT seq 2379 nt   +upstreamnt  +downstreamnt
atgaaattcttcattgacaatctacctataatatttccgtatgaccgcatctacccagaa
cagtacgcgtacatgtgtgacttgaagagaacactggatgccaccggccactgcgtgtta
gaaatgccgtccggaacggggaaaacagtttcgctgttgtcactcatcgtctcatatcaa
cagttttatcctacgaagcgcaagctcatatattgttcgagaacagtaccagagatcgag
aaggcactgacggaactgaagaggctaatgaaatacagagaagaggctgctgagtccgaa
gaggagaagatcaaagaacgcaattacatggggcttggtttgacaagtcgaaaaaacttg
tgtataaatccagaggtatcaagagagaagaaaggaaaggttgtcgatgctcgatgtcgg
gatcttaccaattctgctgtatgcgaaaagggaagggcagatccaggttctgtggagttg
tgtgattggcacgaaaatctcgggaaaatggaaccaggacatcttatgccagccggtatt
tggacgcttgctgatgttttggattatggaaaggaacaacggatctgcccatattttgca
gtgaggcgcatgatgccttttgtagatgcggtcatctactctttccactatttgcttgac
cccaaggtagcagaacaggtgtccaaagaaatgtcgaaagactcaattgttgttttcgat
gaggcccacaacatagataatgtttgcattgaatctttaagtattgacctaacacgcccc
atgcttgattcagcggtgagaagtgtcacgaaacttggtgaaaaaatagaagaggtcaag
actacagacgcagctaagctacaggacgagtatgccaaactggtagaagggttacaagaa
ccagatgactccgatacggacaatgcattggctaaccctgtacttccagaagatattctg
aaagaagcaatacctggaaacattcgaaaggcggaacactttgtcgcatttctcaaacga
tttgtcgaatatttgaagacacgaatgagagtcttacatgtggttgctgaaacaccatta
tcgttccttcagcacctgaaagatatcacttacatcgaacgacggccgttaagattttgt
gctgagcgactacaatcccttatacggacgttggaactcagtaggctagacgaacattcc
agcttacagaaggtggcgactttcgccactttggtcgccacatacgagaaagggttctta
ctaatactggagccgttcgagacggataatgctacagttcccaatcctatctttcatttc
acgtgccttgacccttcgctcgcaataaaaccggtctttgaacgctttagcagcgttgtc
atcacatctggcactatttctccgttggatatgtatcccaagatgctccaatttacaccg
gttgtccaagaaacctattctatgactctcaccaggaacgcttttttgccattggtcatc
acgcgaggaagtgaccaggtcgccatcagctcgcgatttgaagtcagaaatgatcccgct
gttgtccgcaatttcgggagtatactggttgaatacagcaagattgtacccgatggtatt
gttgctttctttcccagttatttgtatatggagtcaatcgttgcggcgtggaatgacatg
ggcattctcaatgaggtgtggaaacacaaactcattttcgtcgaaacacccgatgcaaat
gaaacaagcatcgctctagaaaattatcggcgggcctgtgacaacgggcgcggtgcagtc
ttactttccgtggctcgaggcaaggtttcggagggtattgatttcgatcacaactacggg
agagccgtgttaatgtttggtgttccctaccagtatactgaaagtcgcattctaaaagca
cgtttggagtaccttcgggatgcataccggatacgggagtctgaatttttgggtttcgat
gccatgcgcaacgccgctcaatgtgtaggccgtgttttacggggaaaaacagactggggt
ctgatggtctttgctgataagcggttcgcccgagctgacaagagggccaagcttccccgt
tggattaaccagtatatcacagaaactgcgtccaatctctccacggatatggcaataaca
ctctcaaaattatttatgcgcactatatcacagaaccccaatgagaatcaaacgggggtt
tcattgtgggctttagaggacatcgagaaagcacaagcgaaacagaaggctctcgcctct
ttacaggagcaagtcgacgaagatgacatggatgaagacgataagtacgatgacggggga
atagacgaccaagcattgatgagtttagacatagcgtaa

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