KEGG   Agaricus bisporus var. bisporus H97: AGABI2DRAFT183391
Entry
AGABI2DRAFT183391 CDS       T03140                                 
Symbol
AGABI2DRAFT_183391
Name
(RefSeq) hypothetical protein
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
abv  Agaricus bisporus var. bisporus H97
Pathway
abv03022  Basal transcription factors
abv03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:abv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    AGABI2DRAFT183391 (AGABI2DRAFT_183391)
  09124 Replication and repair
   03420 Nucleotide excision repair
    AGABI2DRAFT183391 (AGABI2DRAFT_183391)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:abv03021]
    AGABI2DRAFT183391 (AGABI2DRAFT_183391)
   03400 DNA repair and recombination proteins [BR:abv03400]
    AGABI2DRAFT183391 (AGABI2DRAFT_183391)
Transcription machinery [BR:abv03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     AGABI2DRAFT183391 (AGABI2DRAFT_183391)
DNA repair and recombination proteins [BR:abv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     AGABI2DRAFT183391 (AGABI2DRAFT_183391)
SSDB
Motif
Pfam: MAT1 zf-C3HC4_5 zf-RING_5 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3 zf-RING_UBOX zf-rbx1 zf-RING_4 SIDD_N VIT1 XRN_M
Other DBs
NCBI-GeneID: 18080364
NCBI-ProteinID: XP_006458305
JGI: Agabi_varbisH97_2_183391
LinkDB
Position
Unknown
AA seq 383 aa
MTSRNNVGGWLRGKTIKKAGAASSSNTRSSTPQQVQSTSTTVFGGGVKDPSGRVSEFFSM
DDQCPVCKSDRYLNPKLRLLVSSCYHKMCESCIDRLFTLGPAPCPICNKILRKLAFTPQT
FEDLGVEKEVAVRRRIAKEFNKRREDFPDLRFYNDYLEEVEDITFNLINDIDITETEARV
ARYRLENSALIELNLQREEAYVQQLRDQEETERREREARAQELRREEEEEREEREKGKRE
IIDKLETSNKDAAKVVAKTRANALKRSQARSSSASQLMSSSRLLRSRAAQSTNVPDVPHV
PLQDNYYAYEGKFVLRPEGYLDFLSEAVRKDREGIMRGGGYKVEEAWERALRSAVAALDL
PPLSGLPNQTSQSEQEGDVVMVS
NT seq 1152 nt   +upstreamnt  +downstreamnt
atgacttctcgaaataacgtcggaggctggcttcggggaaagacaattaagaaagctggg
gccgcttcgtctagcaacacgcgttcttctaccccacagcaagtacaaagcacttcaacg
accgtattcggagggggtgtcaaagacccatcaggaagagtatcagaatttttctcaatg
gacgaccagtgtcctgtttgtaagagcgaccgatatctcaatcctaagcttcgcctgctg
gtaagctcatgctaccacaaaatgtgtgagtcatgcattgacagactattcacactgggg
ccagcgccttgtcctatctgcaataaaatcctccgaaagcttgcgtttacaccacagact
ttcgaagacctcggagtcgagaaggaagtggctgtaagacgacggatagcaaaagaattt
aacaaaaggagggaagattttccagatcttcgattctacaacgattacctggaggaggtt
gaagacattaccttcaacctcatcaatgatatcgacattacggagacagaggctcgggtg
gcaagatatcgtttggaaaattccgcgcttatagaactcaatctgcagcgtgaggaagct
tacgttcagcaacttcgcgaccaagaagagacagaacgtcgagaacgtgaagcgagagca
caagaacttcgacgagaagaagaagaggaacgagaggaacgagaaaagggcaagcgagaa
atcattgacaaactggagaccagtaacaaagacgccgctaaagtcgtggctaaaacgcgc
gcgaatgcactcaagcgcagccaagctcgctcctcctctgcttcacaacttatgagcagc
tcgaggttgttaaggtcaagagcagcacaaagtacaaacgtgcccgatgtgcctcatgtc
ccactgcaagacaactattatgcttatgaaggcaaattcgtgctgcgacctgaaggatat
cttgattttctaagtgaggctgtcagaaaggacagggaaggaatcatgcgcggagggggt
tacaaagtcgaagaggcatgggagcgggctctccgcagcgccgtcgctgctcttgacctt
ccacctctatcgggactccctaatcagacatcccaatcagaacaggagggagatgtagtc
atggtatcatag

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