Agaricus bisporus var. bisporus H97: AGABI2DRAFT183391
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Entry
AGABI2DRAFT183391 CDS
T03140
Symbol
AGABI2DRAFT_183391
Name
(RefSeq) hypothetical protein
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
abv
Agaricus bisporus var. bisporus H97
Pathway
abv03022
Basal transcription factors
abv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AGABI2DRAFT183391 (AGABI2DRAFT_183391)
09124 Replication and repair
03420 Nucleotide excision repair
AGABI2DRAFT183391 (AGABI2DRAFT_183391)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abv03021
]
AGABI2DRAFT183391 (AGABI2DRAFT_183391)
03400 DNA repair and recombination proteins [BR:
abv03400
]
AGABI2DRAFT183391 (AGABI2DRAFT_183391)
Transcription machinery [BR:
abv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
AGABI2DRAFT183391 (AGABI2DRAFT_183391)
DNA repair and recombination proteins [BR:
abv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
AGABI2DRAFT183391 (AGABI2DRAFT_183391)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-RING_4
SIDD_N
VIT1
XRN_M
Motif
Other DBs
NCBI-GeneID:
18080364
NCBI-ProteinID:
XP_006458305
JGI:
Agabi_varbisH97_2_183391
LinkDB
All DBs
Position
Unknown
AA seq
383 aa
AA seq
DB search
MTSRNNVGGWLRGKTIKKAGAASSSNTRSSTPQQVQSTSTTVFGGGVKDPSGRVSEFFSM
DDQCPVCKSDRYLNPKLRLLVSSCYHKMCESCIDRLFTLGPAPCPICNKILRKLAFTPQT
FEDLGVEKEVAVRRRIAKEFNKRREDFPDLRFYNDYLEEVEDITFNLINDIDITETEARV
ARYRLENSALIELNLQREEAYVQQLRDQEETERREREARAQELRREEEEEREEREKGKRE
IIDKLETSNKDAAKVVAKTRANALKRSQARSSSASQLMSSSRLLRSRAAQSTNVPDVPHV
PLQDNYYAYEGKFVLRPEGYLDFLSEAVRKDREGIMRGGGYKVEEAWERALRSAVAALDL
PPLSGLPNQTSQSEQEGDVVMVS
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacttctcgaaataacgtcggaggctggcttcggggaaagacaattaagaaagctggg
gccgcttcgtctagcaacacgcgttcttctaccccacagcaagtacaaagcacttcaacg
accgtattcggagggggtgtcaaagacccatcaggaagagtatcagaatttttctcaatg
gacgaccagtgtcctgtttgtaagagcgaccgatatctcaatcctaagcttcgcctgctg
gtaagctcatgctaccacaaaatgtgtgagtcatgcattgacagactattcacactgggg
ccagcgccttgtcctatctgcaataaaatcctccgaaagcttgcgtttacaccacagact
ttcgaagacctcggagtcgagaaggaagtggctgtaagacgacggatagcaaaagaattt
aacaaaaggagggaagattttccagatcttcgattctacaacgattacctggaggaggtt
gaagacattaccttcaacctcatcaatgatatcgacattacggagacagaggctcgggtg
gcaagatatcgtttggaaaattccgcgcttatagaactcaatctgcagcgtgaggaagct
tacgttcagcaacttcgcgaccaagaagagacagaacgtcgagaacgtgaagcgagagca
caagaacttcgacgagaagaagaagaggaacgagaggaacgagaaaagggcaagcgagaa
atcattgacaaactggagaccagtaacaaagacgccgctaaagtcgtggctaaaacgcgc
gcgaatgcactcaagcgcagccaagctcgctcctcctctgcttcacaacttatgagcagc
tcgaggttgttaaggtcaagagcagcacaaagtacaaacgtgcccgatgtgcctcatgtc
ccactgcaagacaactattatgcttatgaaggcaaattcgtgctgcgacctgaaggatat
cttgattttctaagtgaggctgtcagaaaggacagggaaggaatcatgcgcggagggggt
tacaaagtcgaagaggcatgggagcgggctctccgcagcgccgtcgctgctcttgacctt
ccacctctatcgggactccctaatcagacatcccaatcagaacaggagggagatgtagtc
atggtatcatag
DBGET
integrated database retrieval system