KEGG   Agaricus bisporus var. bisporus H97: AGABI2DRAFT185307
Entry
AGABI2DRAFT185307 CDS       T03140                                 
Symbol
AGABI2DRAFT_185307
Name
(RefSeq) hypothetical protein
  KO
K12600  superkiller protein 3
Organism
abv  Agaricus bisporus var. bisporus H97
Pathway
abv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:abv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AGABI2DRAFT185307 (AGABI2DRAFT_185307)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:abv03019]
    AGABI2DRAFT185307 (AGABI2DRAFT_185307)
Messenger RNA biogenesis [BR:abv03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     AGABI2DRAFT185307 (AGABI2DRAFT_185307)
SSDB
Motif
Pfam: TPR_2 TPR_CcmH_CycH TPR_1 TPR_17 TPR_12 TPR_8 TPR_14 TPR_16 TPR_19 TPR_11 TPR_9 TPR_22 TPR_Slam ARM_TT21_5th DUF6584 ANAPC3 NET2A DUF4192 TPR_20 ARM_TT21 TPR_15
Other DBs
NCBI-GeneID: 18080567
NCBI-ProteinID: XP_006460973
JGI: Agabi_varbisH97_2_185307
LinkDB
Position
Unknown
AA seq 1381 aa
MSFVKSKLKAARESIGHKNFSAARDAARQGLSQLYEKIDNPQRLLDTLKTIAQLHQKADD
PIKTAETLQKIIDITRSLGDKRQLVKALLYLLPDSPFYHVLSGLAPPDPTNPTATAIFHV
QSTIHNELPVLEEIVALIEAQETSFMEKEFESRRTRLNAGSLKEVRNEIGREIWAESQLP
ALYNQISNHPGSTDDLRRGTESKLLRHKVNYLHALPLTEKYRMQKHELSKEIDELIRGVI
LLKIPDELAWTLYVEEQDCEAMSDYDYSVMKQLIEVLPNSVLAEAFQCYYEYISEGLSEQ
GNEGEEDEEKASKHGEDPFDGIMNVFARAQGSLTVSRIVGEVYLNEEDYQNASSVAKTAL
ELLQKIEKESGKKLRKTQVGLQSILASALTNLFPPKHHQRASSILHEALSISPENIRCLI
SQAYILRTAQDWIPAAQLYQKIVELLPGDLEDGLEAKEDQAWCHWQATQELSDIEKMKDV
LDDLQNLDGRSHNAARCLWRIGKCYWDLDGIQREEAYSFFIASLKQDSSFAPAFTSLGFF
YADVASPSDPVRASKCFQKAFELDPRENLAARKLAEGFAEDREWDLVEVVARRTIEGEGG
ISPDSASSVVEFIPTNSWAWKAVGLVEMNRENYLPAIQAFQNVLRAEPEDCLSWSRLGEA
YAKAGRQAAAIKALHHALELDPQNWLCSFLIAELKSKTGLCQEAIYIFEELLTQRPDELS
VIVALAQAHFALGQTQLQGGFQIRAEASFLDAIEAAMLILERYPGFRGVSWKIISDAALQ
LCLRTKFHNDSRVAKLSSALHLFLSKEHKTDSRSPFAIESSGPNALLSISIQACHLRVAL
NQSSNVARGAACYDLAIGLKTWCTRVPDVGLDIKSGVIEAMTNALKEEPTNELYWSTYGN
VQFSDHPKVAQHAYIKALELNPKDVATWTNLGLLYYHHGDLELANEALYRAQVVDPDYPL
AWLGQALVAAGNGHEFDAYSLLTHAITLTPNLPDVDAEYGIRAFYESKLSKRRTEDETDP
IPCFFALDRYCSCRPDDPLGLHLFALICERIGHIDLAISSVERCITILEAAYEESENLVV
ERQYTIASTTLGRLLLSAGQHERSLESFQTSLGLLVGNEEGEEMTEHVDHGRETILLRVQ
AHLGLALAHFMLRDYSSSLTSSQAALSIAGDDLALKAQIMILLTQTLWALGTDEMKETAK
AQLLEYIAVDSENIAAINALAGMGILTEDENLIDAALSEVLSLSVDQRQELDIHRDVDYL
VVQHHLSKGMINDALSVAQKEVFLEPGKVEPRIRLANLMIQSKGQRATLSLLSDAVSTSV
RDDLSSVAAALRLHSVALCSPSAPTQNLRKSLREIQRAIMLRPFHLKSWQALAYIRSCMG
Q
NT seq 4146 nt   +upstreamnt  +downstreamnt
atgtcgttcgtaaagtcgaaactcaaagcagctcgcgaatccatcgggcacaaaaatttc
tccgctgcacgcgatgccgcgagacagggactatcgcaattatatgaaaaaatagacaat
ccgcagcgacttctcgacactctgaaaactattgcacaactccaccaaaaagctgacgat
ccaattaaaacagcagagactcttcaaaagatcatcgatatcacgcgcagccttggtgat
aagagacagctagtaaaagcgttgttatatctcttaccggacagccctttttatcatgtc
ttatctggcctggctcccccagatccaaccaatcctacggctacagccattttccacgtt
caatctactattcacaatgagcttccagtgctggaggagattgtagcactgatcgaagcc
caggaaacttctttcatggaaaaggagtttgaaagtcggaggacacgactcaacgctggt
agcctcaaagaggtcaggaacgaaattggaagggaaatatgggcagaatctcagctccct
gccctatacaatcagatatcaaatcacccaggttcgaccgatgatcttcgcagaggaacg
gaatcaaagctgcttcgacacaaagtgaactatttacacgctttacctctgactgagaaa
tatcgaatgcaaaaacatgaactctcaaaagaaattgatgagctgattcgaggggtcatc
ttattgaagataccggacgagttagcttggacattgtacgtggaagagcaagattgtgag
gctatgtctgattacgattattcggtgatgaagcaattgatcgaagtactcccaaactct
gttttggctgaggcattccaatgttattacgagtatatctcagagggattgtctgagcaa
ggaaatgagggcgaggaagacgaagagaaggcttcgaagcacggagaagatcctttcgat
ggtatcatgaacgtttttgcaagagctcaaggctcgttgacagtcagtcgtattgttgga
gaggtctatctcaacgaagaagattaccaaaacgcaagcagcgttgcgaaaacggctctt
gaactacttcaaaagattgaaaaagagagcggaaaaaaattgcgcaaaactcaagttggc
cttcagtccatccttgcatcggcgttgacaaatcttttccccccaaaacatcatcaacgt
gcttcaagcatcttgcatgaagcactgtctatctctcccgaaaatattagatgtcttatt
tctcaagcttacattttacggactgcgcaagactggattcctgcagcccaattataccaa
aagatagtagagttgcttcccggcgacctagaagatgggctcgaagcgaaagaggatcaa
gcgtggtgtcactggcaggccacacaagagttgtcagacatagaaaagatgaaagatgtt
cttgacgacctgcaaaacctggatgggcggagccataatgctgcgcgatgtttgtggaga
attgggaagtgttactgggaccttgatggaattcaaagagaagaagcgtattcctttttt
atagcttcgctcaagcaagattcctcttttgcgccagcattcacctccctaggctttttt
tatgccgacgttgcttcaccttcggaccctgttcgagcatcaaaatgttttcaaaaagcc
ttcgaattggatccccgcgagaatttagccgcccgaaaattagctgaaggtttcgcggag
gacagagaatgggatctcgttgaagtagtggccaggcgtaccatcgaaggagagggtggc
ataagtcctgattccgcatccagcgtcgtcgagttcattccaacgaactcttgggcgtgg
aaagctgttgggctcgtggagatgaaccgtgaaaactatcttcctgctatccaggcgttt
cagaacgttctgagagccgaacctgaggattgcctcagctggtccagactgggtgaggct
tacgccaaggcaggcaggcaggcagctgctatcaaagcactacatcatgcgctagagctc
gatccacaaaactggctttgctcttttcttatcgcggagctcaagagcaagacaggttta
tgtcaagaagcgatctacatcttcgaggagctattaactcaacgtccggatgagctgagc
gtaatcgtcgcccttgctcaagcgcactttgcactgggacagacgcagctccaaggaggc
tttcaaatcagagcggaagcttcatttttggatgctatagaggctgcgatgctgattctc
gaacgctacccaggcttccgaggtgtgtcgtggaagataatatccgatgccgctcttcag
ctgtgtctccgtacgaaatttcataatgattcacgcgtagctaaactttcaagtgcactt
cacctttttttatcgaaagagcataaaaccgattcgcgatcaccatttgccatcgaatcc
tcaggtcctaatgcattgctcagcatttcaattcaagcttgccatttgagggtcgctcta
aaccaatcttctaatgtagctcgtggggccgcatgttatgaccttgccattgggctaaag
acctggtgcacaagagtaccggacgtgggtctggatataaagagcggagtaatcgaagca
atgacaaatgcgctgaaggaggagccaacaaatgagctgtattggagtacttatgggaat
gtgcagttttcagaccacccaaaggttgcgcagcatgcttatatcaaggcactcgagcta
aatcccaaggatgtagctacatggaccaacctgggtttgttgtattaccaccatggcgat
ctggaattggccaatgaagctctctatcgggcacaagtggtagatccagattacccttta
gcgtggctcggacaggccctggttgcagctggaaacggtcacgaatttgatgcatattcc
ctcttgacacatgccattactttgactcccaatcttcctgacgttgatgctgaatacgga
attcgagcgttctacgagtcgaagctctcgaagaggagaacagaggatgaaactgacccc
ataccctgcttcttcgctttggaccgttactgttcctgcagaccagatgatcctttgggg
ttacacttatttgctctcatatgcgagaggattggtcacattgacctggccataagttca
gtagagcgatgcataactattctcgaggccgcctacgaggagtcggagaatttagtcgtc
gagagacaatatacaatcgcgagcacgaccctcggccgtctcttactatcggcgggtcaa
cacgagcgctcactggaatcttttcagacgtccctaggtttactggtggggaacgaggag
ggtgaagaaatgactgaacatgtggatcatggccgggagaccatcctcctacgtgtgcag
gctcatcttgggcttgcgctagctcatttcatgttgcgagattattctagctcattgacc
tcatctcaagccgcattaagcatcgctggagatgacttggctttgaaagctcagatcatg
attctcctgactcaaacactctgggctcttgggacagatgaaatgaaggagacggcaaag
gcacaactactcgaatacattgcagttgattctgagaatattgctgccataaatgcgctt
gcaggcatgggcattctgactgaagacgaaaatctcatcgatgcggcactatcggaagtg
ctcagtctatcagttgatcagcgacaggaattggatattcatagagacgtggactacctg
gtcgtgcagcatcatctgagcaaggggatgatcaatgatgctttatcagttgctcagaaa
gaggtctttttggaaccgggaaaggttgaaccgcgcatccggttagcaaatctgatgatt
caaagcaaggggcagagagcaacgctctcactgctttcagatgcagtctcgaccagcgtc
cgagacgacctgtcatcagtagctgctgccttgagattgcactcggtcgcgttatgcagt
ccaagtgcaccaacccagaatttacgcaagagcctgcgagaaatccagagggcaataatg
ctgcggccattccatttgaaatcttggcaggcattggcttatatcagatcctgtatgggg
caatag

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