Agaricus bisporus var. bisporus H97: AGABI2DRAFT187339
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Entry
AGABI2DRAFT187339 CDS
T03140
Symbol
AGABI2DRAFT_187339
Name
(RefSeq) hypothetical protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
abv
Agaricus bisporus var. bisporus H97
Pathway
abv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AGABI2DRAFT187339 (AGABI2DRAFT_187339)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abv03400
]
AGABI2DRAFT187339 (AGABI2DRAFT_187339)
DNA repair and recombination proteins [BR:
abv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
AGABI2DRAFT187339 (AGABI2DRAFT_187339)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
Motif
Other DBs
NCBI-GeneID:
18080797
NCBI-ProteinID:
XP_006463889
JGI:
Agabi_varbisH97_2_187339
LinkDB
All DBs
Position
Unknown
AA seq
966 aa
AA seq
DB search
MYGKERSTTNDTDQTTDIGFLDFFNSLPKKSPETGTLRLFNRTSGGDSFYCAYGPDAVFV
AQHVFHTKSVIKYLGAGARRLESVTLKVSVAQMLLREALTSKQLRVEIYESENGHGKKGT
TFRLDKEASPGNLQAVEDLLFVNSDILSAPVVMAIQLANVPVSATGVKSSHKAIGVAFAD
TSVRELGVADFIDNDIFSNTESLIIQLSVKEAILPTGTSAGTTERDIDLNKMKGVLERCG
VVITERKPSEFRSKNIADDLPRLLQSQSPVSTADASATISQLSLPTAPAALSALVQYLSL
LTDDSNLGSYKLRTHDLSQYMKLDASALRALNLTENSGTVGLGAKNTTLLGLLNKCKTSQ
GTRLLGTWIKQPLVNLHGIRKRQNLVEIFTNESTTRQILQDEYLKVMPDLQRLGKRFKRG
NASLEDVVRIYQVVLKLPGMITSLEAVQMVSQDYQAAIDEAYLSSLKEHDSHLKKYSEMV
EATLDLDELDNHNYVIKPDYDERLQQLAEKLKRVRDGLDSEHTVVGDDLNIELDKKLHLE
NNQVYGYCFRLTKTDAKGLSKKFIELGTNKSGVYFTTKTLKNLAEEYKDLTQTYARTQNG
LVKEVVNIAATYAPVLETLDNVVAHLDVILSFAHVSVSAPIPYIKPTLLDKGIAFLSCGQ
YLAEYFEGSGNLVLREARHPCLEVQDEINFIPNDIEMVKDRSEFQIITGPNMGGKSTYIR
QVGVIALMAQIGCFVPCEEAQLPVFDSVLCRVGAGDSQLKGVSTFMAEMLETATILRSAS
KDSLIIIDELGRGTSTYDGFGLAWAISEHIATKIHAFCLFATHFHELTALDQQLSHVKNL
HVVAHVTQNGSNIRDRDITLLYKVEPGISDQSFGIHVAELANFPENVVKLAKCKADELED
FTGEKKLDGDISQATITNGIVIMEEILHEWSAQMDESQLHNLQKLTKSYQTSIEENSWLQ
SILTLL
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgtacggcaaggaacgctcgacgaccaacgacacagatcaaaccactgacattggcttt
ctcgacttcttcaatagtctgccaaagaagtctccagaaacaggtaccttgagacttttt
aaccgtacaagtggtggagattcgttctactgtgcatatggaccggatgctgtcttcgtc
gcgcaacacgtttttcacaccaaatccgtgatcaagtacctcggcgctggtgcgcggaga
ttggaaagcgtgacgttgaaggtttcggtggcacaaatgctcctcagagaggctttgacc
tcgaagcaacttcgtgttgagatatatgaatcagagaatgggcacgggaagaagggcacc
acattcaggttggataaagaggcatctcctggaaaccttcaagcagtcgaggacctgtta
tttgtcaattcggatattctctctgcccccgtcgtgatggcaatccagctggcaaatgtt
cccgtttctgccaccggagtgaaatcaagccataaggcaattggtgtagcgtttgcggat
actagcgttcgcgaacttggcgtcgcggatttcattgataatgatattttttctaatacg
gagtcgctgataattcagctttcggtgaaagaggccattctcccaactgggacgtctgct
ggtaccacggagcgagacattgacctcaataaaatgaaaggtgtgcttgagcgctgtggg
gtagtcattaccgaacgcaagcctagcgagttcagatcgaagaatattgctgatgacttg
ccccggcttctacaatctcagtctcccgtgtcgaccgctgatgcatccgcgacgatctcc
cagttatcacttccaacagcacctgcggcactctcggccttggtccaatacttgtcgctc
ctaacggatgactccaatcttgggtcttacaagttacgaacgcatgacctgtcacagtac
atgaaacttgatgcaagcgctttaagagccctcaacctcaccgagaattcgggaaccgtg
ggtctgggggccaaaaacacgactctcctcgggttgcttaataagtgcaagacgtcacaa
ggtacacgtttattgggaacttggatcaaacagcctctggtaaacttgcacggaattcgg
aagcgtcaaaatcttgtcgagatattcacaaatgaaagtactactcggcagattctgcag
gatgaatatttgaaagtaatgccagaccttcaacgtctgggtaaacgtttcaaaagaggc
aacgcttctctggaggatgtggtacgcatctatcaagttgttctaaagttgccgggcatg
ataacgtctctggaagccgtccagatggttagtcaggattatcaagctgcaatcgatgaa
gcgtacctttcttctctaaaggaacatgattcccatctcaagaaatacagcgaaatggtt
gaagccactctcgatcttgacgagttagacaatcacaactacgtgatcaagcccgactat
gatgagcgccttcagcaattggcggagaagctcaaaagagtcagggatggattagattct
gaacataccgtggtgggcgatgatctgaatattgaactcgataagaaactacacctggaa
aacaaccaagtttacggctattgtttcaggttgacaaagacggatgcgaaagggctttca
aaaaagtttattgaactaggcacaaacaagagtggtgtttacttcaccaccaagacgttg
aagaatcttgcggaagaatacaaagatctaactcagacctatgctcgtacacaaaacgga
ctcgtcaaagaagtggtcaatattgcagcgacgtatgctcctgtgttggaaacactagac
aatgtcgttgctcacctggatgtgattctaagcttcgcccacgtttctgtgagtgcaccc
attccatacatcaagccgacactccttgataaaggtattgcattcctttcttgtggtcaa
tatctcgctgagtactttgaaggctcgggaaatctggtgctcagggaagcaaggcatccc
tgtctcgaggtccaggatgaaataaatttcattccgaacgatatagaaatggttaaagac
aggagtgaattccaaatcatcacgggccctaatatgggagggaaatcaacatacattcga
caggttggtgtcattgctttaatggcacaaattggatgcttcgttccctgcgaggaagca
caattaccggttttcgattccgttttatgtagggttggtgcgggtgacagtcaacttaag
ggtgtttctactttcatggcggaaatgctggaaacagcaacgattttgcgttccgcaagc
aaagactctctgataatcatagatgaactcggtcgaggtacctcgacatacgatggtttc
ggcctggcctgggccatttctgaacatattgcgaccaagattcatgcattctgtttattt
gccacacattttcatgaactaactgcgctggatcaacaactttcgcatgtaaaaaatttg
catgttgttgcacatgtaacacagaatggcagtaatatccgtgatcgtgatataacgtta
ctatacaaggttgagcctggtatttctgaccaaagctttggtatacatgttgctgagctg
gctaactttcccgaaaatgtggtcaaacttgcgaaatgtaaggcagatgagttggaagac
tttactggagaaaaaaagctggatggtgatatatcccaagcaaccattacaaatggtatt
gtgataatggaagagattttacatgaatggagtgctcaaatggatgagagccagttacac
aatctgcaaaagttgacaaagagctatcaaactagtattgaagaaaactcctggttgcag
tctattcttactttactttaa
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