Agaricus bisporus var. bisporus H97: AGABI2DRAFT188191
Help
Entry
AGABI2DRAFT188191 CDS
T03140
Symbol
AGABI2DRAFT_188191
Name
(RefSeq) hypothetical protein
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
abv
Agaricus bisporus var. bisporus H97
Pathway
abv03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AGABI2DRAFT188191 (AGABI2DRAFT_188191)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
abv03009
]
AGABI2DRAFT188191 (AGABI2DRAFT_188191)
Ribosome biogenesis [BR:
abv03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
AGABI2DRAFT188191 (AGABI2DRAFT_188191)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nrap_D4
Nrap_D3
Nrap
Nrap_D5
Nrap_D6
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
18080890
NCBI-ProteinID:
XP_006456147
JGI:
Agabi_varbisH97_2_188191
LinkDB
All DBs
Position
Unknown
AA seq
1276 aa
AA seq
DB search
MALNLKRKRSERAASRKTRRVAEDELSEHSESDLDEELDGSESLSEGPHAEEDEEEGEWG
GIGAAPSLPQESLGGGSEKRNKPPTGEELRDIKDAADLFKSNSFKLQIDALLPNVRPKPS
RVPPLDRFLLALHSFIMEIPSIPQQHPLEASRKMLKKGVAVPYILPLPTEETNWKVGYGT
PSDITLVGSWANKMSVRPKDGLMYGVDLAIEMPDELFQEKDYLNGRFFQKRAFYLSTIAA
AIKSSKKKLHVDLLYDSPSGDPRLTNLVLVPRKDNSPSDFTKLNAKVVLIPTVSQTCPIP
LSRLSPSHSNLRLTSSSSPDRDVASSSAPRQIPSPTYNSALLRAFVPRVHLISTHDLKND
CPGFGDAVTLLRIWGNQRGFAPGSQDKLCVFGFEGRGALWSAVASLAVLGEEQQKKSASN
VFGRRRALGRGLSSYQMFKAALDFLSKADFEKEAIFVKTANGQRFPPDEYNSQEQPTFVD
SASLVNLLSGVPRGSLELLRYEALDTLETLNQTTISSESFNKVFLKDHRNLATRFDSILR
VDLSSVKPRKALLDETMDTGSAFAALLLSIDKLLHMGLGERTKAITLLLPSSSPRPIHQA
LPSTSDVVYIGLVYHPQHAQRLVDQGPAAGEQDQALLTAFTELWGEKAELRRFKDGRIVE
SVVWDVKTADERAHIPTAVVRYLLQRHFGIPASSSQANAVQGWQTVFDSMLRLPEEVSKV
YLNGGFPVGFKSALGAFDGLVKTIKELDDELPLATLNLSPICEALRYTSVFAPVPLTDSL
AGVLPSNARYLPHLDIVIEFEKSSKWPDDLKAIQKIKLAFFEMVAEQLMKKVQGLKARVV
TGDGVHESNLVLDQSFLEVLTPEGWAFALRIWNPREAVLLDRIIAGHDKFLPHIKPLQQH
KQNNQIGKEYHDAVYAKEVYTRRFIHGPRHHRAITSLCHRYSAYAGTVRLVKRWLAAHWV
LGPGKVSEEAVELICAKIFVGDDGKYVGMDVDSELAINQAGVPGTKERGFACVVDCLRKW
KWEEGMDVPLYSPSSDPGQAFLSEVEMGEMSGSDNGVKGKLNGSVKANEVKASSTSAWTI
STGYDKEGKMWTGHGPDVIVAHRVRALSQATWEYLESLEKGDINIQALFVHPTDDYDVVV
YLNPSVLPRYMHNIVANPDMLTKRGKYANKILDGQGVSVRPGFDPASMLFNDLQRVYADT
FKIFYDPYGGDRFGIVWDPSLEQPRPFRVFGGFSGQPIPKENGKDKNKGLVTLNQKAIIG
EIERLGAGMISKVSQT
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcaatctcaagcgcaaaagatcagaacgagccgcttcgcgcaagacgcgcaga
gttgctgaggacgaattgtccgaacactctgaatctgatctggacgaggaactggacggt
agtgagagtctttctgaaggtcctcatgccgaagaagatgaggaggaaggagaatggggt
ggaataggtgcagcgccttcactgcctcaagaaagccttggaggaggaagtgaaaaacgc
aataaaccgccgactggagaggagctacgggatatcaaggatgctgccgaccttttcaag
tcgaattccttcaaactacagatcgatgcgctgcttccaaatgttcgtccgaaaccatct
agagttccacccctcgaccgatttctcctcgcgctacactcattcatcatggaaataccc
tcaatacctcagcaacaccctctcgaagcctcacgcaagatgctcaagaaaggtgttgct
gttccttacatccttccactacccacagaagagacgaactggaaggtcggatatggaact
ccgagcgacatcacgcttgtgggtagctgggcgaacaaaatgagcgtgaggccgaaagat
ggtctcatgtacggtgttgatcttgccattgagatgcctgacgagctgttccaggagaaa
gattatctcaatggacggtttttccaaaagcgagctttctatctttcaactatcgcagct
gctatcaaatcctcgaagaaaaaactgcatgtggacctactttacgactcgccttcgggt
gatcctcgcttaacaaatttagtccttgtgccaagaaaagataactccccttcagacttt
acgaagttgaatgcaaaagttgtcctcatacccaccgtatcgcaaacgtgtccaataccg
ctcagtcgcctctccccatcacactccaatctccgtctcacctcctcttcctcgcctgat
cgagacgttgcctcctcgtcagctcctcgtcaaataccctcaccaacatataattccgct
ctccttcgtgccttcgtacctcgagtacatctcatctcgacgcacgacctcaaaaatgat
tgtcctgggttcggtgacgcggtaacgttgcttcggatctggggcaaccaacgcggattt
gctccagggtctcaggataaactatgtgtattcgggtttgagggccgaggagctttgtgg
agtgcggtcgctagtcttgccgttcttggtgaagagcaacagaagaagagtgccagtaat
gttttcggacgcagaagggcacttggaagagggttgagctcatatcagatgttcaaagct
gctttagatttcctgtcgaaagcagatttcgagaaagaggcaatcttcgtgaagaccgcc
aatggccaacgattcccccccgatgaatacaactcgcaagagcaacctactttcgtggac
tcagcgtcgttagtgaacctgctttccggagtacccaggggatccttggaactgttgcga
tatgaagcactcgatactctagaaaccctgaatcaaactacgatctccagcgaatccttc
aataaagttttcctcaaagatcatcgaaatcttgcgacgcgctttgacagtattcttcgc
gtagatcttagcagcgtaaaaccgcggaaagctttactcgatgaaacgatggacacaggc
tcggccttcgccgcactccttctttccatcgacaaacttctccacatgggtctcggtgaa
cgcacaaaagctatcaccctccttcttccctcatcctccccccgccctatccaccaagct
ctcccttcgacatccgatgttgtatacatcgggctggtttatcaccctcagcatgctcag
aggctcgttgatcaaggtcccgcagcaggagaacaggatcaagctttgctcacagctttc
acggaactttggggtgaaaaagcggagctgcggagatttaaggatgggagaattgtggaa
agtgttgtatgggatgtgaagactgctgatgaacgtgcacatatccctactgcagttgtt
cggtacctgctccagagacattttggtatccccgcctcatcgagccaggctaatgcagta
caagggtggcagaccgtcttcgactccatgttgagattacctgaagaagtatcaaaagtc
tacttgaatggagggttccctgtgggtttcaaaagtgcattgggcgcgtttgatgggctc
gtaaaaaccataaaagaattggacgatgaacttccacttgcgacactcaacctgagtccc
atatgcgaagcattacggtataccagcgttttcgcgcccgtacctttaacggattcattg
gctggagttctcccttcaaatgcgcggtatcttccgcatttggatatcgtcatcgagttc
gaaaagtcgtccaagtggcctgatgacctgaaagcgatccaaaaaattaagcttgctttc
ttcgaaatggttgcagaacaattgatgaagaaggtgcaagggctgaaggcaagagtcgtg
acaggcgatggagtgcacgagagcaatttggtgttggatcaatcatttctagaggtactg
acacctgaaggttgggcctttgcactacgaatttggaatcctcgagaagctgtgctgctg
gaccgtattattgcagggcacgacaaattccttccccatatcaaacctctccaacagcac
aaacagaacaaccagatagggaaagaatatcatgacgccgtatacgccaaagaagtttac
acacgtcgatttatccatggaccgcgacatcaccgcgctataacctccttatgtcaccgc
tactctgcttacgcaggtacggtgcgtctcgtcaaacgatggcttgcggcacattgggtt
ttaggacccggaaaagtcagcgaggaagctgtagaattgatttgcgctaagatatttgtg
ggcgatgatggcaaatatgttggcatggatgttgattcggagttggcgatcaatcaagct
ggggtgcccggaacgaaagaaagaggtttcgcttgtgtggtagattgtttgaggaagtgg
aaatgggaggaagggatggatgttccactatattcaccctcatcagatccaggacaggca
tttttgtctgaggtggagatgggggagatgagcgggagtgataatggtgtgaagggaaag
ctgaatggaagtgttaaagcgaatgaagtgaaagcgtcaagtactagtgcttggactatc
tcgacggggtatgataaagaagggaaaatgtggactggccacgggcctgacgtgatagtt
gcacatagagtcagggcgctttctcaggcaacttgggaataccttgaaagccttgagaag
ggtgacattaacatacaggccctcttcgtccaccccacggacgattatgatgtcgtcgta
tacctcaacccgagcgttctacctcgctacatgcacaacatagtcgccaatccagatatg
ttgaccaagcgtggcaagtacgcaaacaaaatattagatggccagggtgtaagtgtccgg
cccggttttgatcctgcgagtatgctcttcaacgaccttcaaagagtctatgctgacaca
ttcaagatcttctacgatccctatggcggtgatcgtttcggcatagtctgggatccgagc
ttagaacaaccaagaccgtttagggtttttggaggattctcgggtcagccgattcccaag
gagaatggcaaggacaaaaataagggcttagttacactgaatcaaaaagcgatcatcggc
gaaatcgagaggctgggggcgggaatgatttccaaggtctcacaaacatga
DBGET
integrated database retrieval system
