Agaricus bisporus var. bisporus H97: AGABI2DRAFT188567
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Entry
AGABI2DRAFT188567 CDS
T03140
Symbol
AGABI2DRAFT_188567
Name
(RefSeq) hypothetical protein
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
abv
Agaricus bisporus var. bisporus H97
Pathway
abv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AGABI2DRAFT188567 (AGABI2DRAFT_188567)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abv03021
]
AGABI2DRAFT188567 (AGABI2DRAFT_188567)
Enzymes [BR:
abv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AGABI2DRAFT188567 (AGABI2DRAFT_188567)
Transcription machinery [BR:
abv03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
AGABI2DRAFT188567 (AGABI2DRAFT_188567)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
Motif
Other DBs
NCBI-GeneID:
18080936
NCBI-ProteinID:
XP_006456734
JGI:
Agabi_varbisH97_2_188567
LinkDB
All DBs
Position
Unknown
AA seq
1219 aa
AA seq
DB search
MPDGSAQTRKKPTFNTLEREKAFRNPPKEGSVHAVLNEFVAPHIESFNALFDDSGLPPGD
GDGRGLISLAIKDIGERVVFDGISHGTDLRGNRIRIWIEQATVAKPQVPERAQVIERRIF
PSEARERLTSYRGRMTLKICWTDAHGQKNETIKDCGLLPIMVRSVRCNLKGLSSAALVAK
HEEPEEFGGYFIINGNERLIRYLILPRRNHVISLIRPSFANRGLSYTQYAVQIRCVRPDQ
TSATNTLHYLSNGSAMLRFSWRKQEYVIPIMLILKAMVGASDKEIFEGVIMRDYENTFLT
DRVELLLRSFKVFTLNTGEQCLDYLGDKFRVVLNLPEDWTNTAIGKWLVQKMILVHLDSP
RDKFRMLLFMLRKLFALVSSSCCADNPDSPQHQEVLLPGTLYGMIIKERMEEILNNICNT
VMLDVRNGATVDFHDKRYFTKVTSKVNFDIGARLANFLATGNLISPTGLDLQQASGFTIV
AEKLNWQRYISHFRCIHRGAFFAELKTTTVRKLLPEAWGFLCPVHTPDGSPCGLLNHLSR
TCRIVTSPLAVAHLPSLLGSCGMTQVFTPSINGQKNISVQLDGRIIGWAQPSVASQLAKN
LRVWKTEGKNGVPLDLEIGFVPESDGGQYPGLFLFANRSRMMRPVKYLPNGKDDQIGSFE
QVYMNVACLPEEIDANSTHVEHNPTNFLSILANLTPFSDFNQSPRNIYQCQMGKQSMGTP
STALKHRTDNKLYRLQTGQSPVVRPMLHNTYAMDSYPNGTNAIVAVISYTGYDMEDAMIL
NKSAHERGFAYGTVYKSQIVDLKDMRGANKSVTAPSLHFGLGPDVRLEGDRAHHCVDFLD
LDGLPYIGTRLKAGDPIAAYIDETAGRTKFVKYKGDEMAYVDEVRLLASDSGDTELQKMH
VTLRITRSPVIGDKFSSRHGQKGVCSQKWPAVDMPFTESGMQPDVIINPHAFPSRMTIGM
LVESMAGKAGAMHGLAQDATPFKFSEKDTAIDYFGKQLSAAGYNYYGNEPMYSGITGQEF
AADIYIGVVYYQRLRHMVLDKFQVRTTGPVDPITRQPVKGRKRAGGIRFGEMERDALIAH
GASFLLQDRLMNCSDYSTAWVCRTCGSLISLGYEDISLGEVSLGTSGSIKPTGPSGEYCR
VCRAAAEEEEEHERQALNTNQQSQRPPQNSVQVAISSQNVLGRASNKGGDLDVVAVPYVF
RYLCAELASMGIAVSLEVR
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatggctctgcacaaacgcgcaaaaaaccgacattcaataccttagaacgcgaa
aaagccttcaggaatcctcccaaggaaggctcagtacacgctgtcctcaatgagtttgtc
gccccccacatcgagtcttttaatgctcttttcgatgattctggtctaccgcctggggat
ggtgatggacgtgggcttatctctcttgcaatcaaagatataggagagcgcgtcgttttc
gatggaattagccatggcacagaccttagaggcaatcgtatccgaatctggatagaacag
gctacagtagctaaaccacaagttcctgaacgggcgcaagtaatagaaaggagaattttc
ccttctgaggctcgcgaacgcctaacctcgtatcggggtcgtatgaccttgaaaatatgc
tggaccgacgcacacggtcaaaaaaatgaaacaatcaaagattgtggtcttttgccaatc
atggtccggtctgttaggtgcaatcttaaaggactatcatcggcagctcttgtagccaag
cacgaagaacccgaagagttcggcggttattttatcatcaacggtaatgaacgtctcatc
cggtatctcatccttccaagacggaatcatgttatatccctcatccgaccctctttcgct
aatcgtggtctatcatatacccaatacgctgtgcaaatccgttgcgtgcgtcccgatcag
accagcgctaccaacactctccattacctttctaacggcagcgcgatgctgaggtttagt
tggcggaaacaagaatatgtcatacctatcatgttgattcttaaggccatggttggtgcc
tcggacaaagaaatatttgagggcgtcataatgcgagactacgagaacacctttctgact
gaccgtgttgaacttctactccggagttttaaagtcttcaccctcaataccggcgaacaa
tgtttggattatcttggcgacaaattcagagtagtacttaacttgccagaagactggacg
aacactgctattggaaagtggttggtacaaaaaatgatactggttcacttggattccccc
agggacaagtttcggatgcttctgttcatgctacgtaaactatttgcattggtatcaagc
tcttgctgcgccgataatcccgactcccctcaacatcaagaggttctgctgcccggcact
ttgtatggcatgattatcaaagaacgcatggaagagattctcaacaacatctgcaataca
gtcatgcttgacgttagaaatggggccaccgtcgattttcatgataagcggtactttacg
aaggtgacatcgaaagtcaattttgacattggcgcaagattggcgaattttttggctaca
gggaatctcatatcacctacgggccttgatttgcagcaggcgtctgggttcacaattgtt
gccgaaaaacttaactggcaacgttatatcagtcacttcaggtgcatccatcgtggtgca
ttcttcgccgagttaaaaacaactacagttcgtaagctactacctgaggcatggggtttc
ctttgtcccgtacatacacccgacggctcaccttgcggcctccttaaccatctttctcgg
acatgtcgaatcgtgacatccccccttgctgttgcccacttgccttcacttttaggttca
tgcgggatgacacaggttttcacaccttcaatcaatggacaaaaaaacatttccgtgcaa
cttgatggtcgaatcatcggctgggctcagccttccgtcgcatcccaacttgctaaaaat
ttgcgagtatggaagacggaaggtaagaatggtgttcctttggaccttgaaataggtttt
gtgcccgaatcggacggtggtcaataccccggacttttcctctttgccaaccgttcacgg
atgatgcgacctgtgaaatatttacccaacgggaaggacgaccagattgggtcgttcgaa
caggtgtatatgaatgttgcctgtctccctgaagagattgacgccaattcaactcatgtt
gaacacaaccctacaaatttcttgtctatccttgccaatctaaccccattttccgatttc
aatcagagtccccgaaatatctaccagtgtcagatggggaagcaaagcatgggtacccct
tccacagcgctcaagcatcgcacagacaataagctataccgtttacaaaccggtcaaagt
ccagttgttcggcctatgctccataacacctatgcaatggattcgtatccaaatggtaca
aatgctatcgttgctgtgatttcatataccggttacgacatggaagatgccatgatcctc
aacaagtctgcccatgaacgggggtttgcctacggaacggtgtacaaatcacagatcgtt
gatctcaaggatatgcgaggggcaaataaatctgtgaccgcgccgtcattacactttggt
ctaggccctgatgttcgtctggaaggcgaccgagctcatcactgtgttgattttcttgac
cttgatgggctgccttacatcggcacccgactcaaggccggggaccctattgccgcttat
attgacgaaactgctggccgaaccaagttcgtcaagtataagggagacgagatggcgtac
gttgacgaggttcgacttcttgctagtgactccggagatacggaattgcagaagatgcat
gtcactctgcgtatcactcgatctccagtcatcggtgataagttctcatctcgacatggg
cagaaaggagtatgctcgcaaaaatggcctgccgtagatatgccattcactgagagtgga
atgcaaccagatgtcattataaaccctcacgcgttccccagtcgcatgaccattggtatg
ttggttgaaagcatggcaggtaaggcgggtgctatgcatggtctggctcaagacgccacg
cctttcaagttctcggagaaggacaccgccatagactacttcggaaaacagctgtcggcc
gcaggatataattattatgggaacgagccaatgtactctggcattacaggtcaagagttc
gcagcagatatctatattggagtggtctactaccagcgactgcgccatatggtattggat
aaattccaagtccgaacaactggtccagttgacccaatcacgcgtcaacctgtcaagggt
cgtaagcgagctggtggtatccgattcggtgagatggagcgggatgctctcatcgcacat
ggagcttccttccttctgcaagataggttgatgaactgctcggactattcgactgcttgg
gtttgtcgtacttgcggcagccttatctcacttggctatgaagacatcagtctcggtgaa
gtttctttgggcacttcgggatcgatcaaacctaccggaccaagcggtgaatattgtcgt
gtgtgccgcgcagctgccgaggaagaggaggaacatgagcggcaggcactcaatacaaat
caacaatcacagcgaccgccacagaatagcgtacaggtcgctatctcatctcaaaatgtg
ctcgggagagcatcgaataaagggggcgaccttgatgtcgtggcagttccttacgtgttt
agatatctctgtgccgaactggcgtctatgggtatcgcagtctcacttgaagtgaggtga
DBGET
integrated database retrieval system