KEGG   Agaricus bisporus var. bisporus H97: AGABI2DRAFT189809
Entry
AGABI2DRAFT189809 CDS       T03140                                 
Symbol
AGABI2DRAFT_189809
Name
(RefSeq) hypothetical protein
  KO
K11097  small nuclear ribonucleoprotein E
Organism
abv  Agaricus bisporus var. bisporus H97
Pathway
abv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:abv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AGABI2DRAFT189809 (AGABI2DRAFT_189809)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:abv03019]
    AGABI2DRAFT189809 (AGABI2DRAFT_189809)
   03041 Spliceosome [BR:abv03041]
    AGABI2DRAFT189809 (AGABI2DRAFT_189809)
   03032 DNA replication proteins [BR:abv03032]
    AGABI2DRAFT189809 (AGABI2DRAFT_189809)
Messenger RNA biogenesis [BR:abv03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     AGABI2DRAFT189809 (AGABI2DRAFT_189809)
Spliceosome [BR:abv03041]
 Complex A
  U1 snRNP components
   Sm proteins
    AGABI2DRAFT189809 (AGABI2DRAFT_189809)
  U2 snRNP components
    AGABI2DRAFT189809 (AGABI2DRAFT_189809)
 Complex B
  U1 snRNP components
    AGABI2DRAFT189809 (AGABI2DRAFT_189809)
  U4/U6.U5 tri-snRNP components
    AGABI2DRAFT189809 (AGABI2DRAFT_189809)
 Complex C
  U2 snRNP components
    AGABI2DRAFT189809 (AGABI2DRAFT_189809)
DNA replication proteins [BR:abv03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     AGABI2DRAFT189809 (AGABI2DRAFT_189809)
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 18081238
NCBI-ProteinID: XP_006454561
JGI: Agabi_varbisH97_2_189809
LinkDB
Position
Unknown
AA seq 87 aa
MSGRQQRVMVQPINVIFKNLQTRSKISVWLYDNIEMRIEGRIIGFDEFMNLVIDDAVEVY
VKEAKPRKELGRILLKGDNITLIQQIQ
NT seq 264 nt   +upstreamnt  +downstreamnt
atgtcgggccgccagcaacgtgtgatggttcagcccatcaatgtcattttcaaaaactta
cagacacgatcgaaaatttctgtctggctatatgataatattgaaatgcgcattgaaggt
cgtatcattggttttgacgaattcatgaatctcgttatcgatgacgcagtcgaagtctat
gtaaaagaggcaaagccccgaaaagaacttggtcgtatattattgaagggtgataatatc
actctcattcaacaaatccagtga

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