Agaricus bisporus var. bisporus H97: AGABI2DRAFT189809
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Entry
AGABI2DRAFT189809 CDS
T03140
Symbol
AGABI2DRAFT_189809
Name
(RefSeq) hypothetical protein
KO
K11097
small nuclear ribonucleoprotein E
Organism
abv
Agaricus bisporus var. bisporus H97
Pathway
abv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AGABI2DRAFT189809 (AGABI2DRAFT_189809)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abv03019
]
AGABI2DRAFT189809 (AGABI2DRAFT_189809)
03041 Spliceosome [BR:
abv03041
]
AGABI2DRAFT189809 (AGABI2DRAFT_189809)
03032 DNA replication proteins [BR:
abv03032
]
AGABI2DRAFT189809 (AGABI2DRAFT_189809)
Messenger RNA biogenesis [BR:
abv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
AGABI2DRAFT189809 (AGABI2DRAFT_189809)
Spliceosome [BR:
abv03041
]
Complex A
U1 snRNP components
Sm proteins
AGABI2DRAFT189809 (AGABI2DRAFT_189809)
U2 snRNP components
AGABI2DRAFT189809 (AGABI2DRAFT_189809)
Complex B
U1 snRNP components
AGABI2DRAFT189809 (AGABI2DRAFT_189809)
U4/U6.U5 tri-snRNP components
AGABI2DRAFT189809 (AGABI2DRAFT_189809)
Complex C
U2 snRNP components
AGABI2DRAFT189809 (AGABI2DRAFT_189809)
DNA replication proteins [BR:
abv03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
AGABI2DRAFT189809 (AGABI2DRAFT_189809)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
18081238
NCBI-ProteinID:
XP_006454561
JGI:
Agabi_varbisH97_2_189809
LinkDB
All DBs
Position
Unknown
AA seq
87 aa
AA seq
DB search
MSGRQQRVMVQPINVIFKNLQTRSKISVWLYDNIEMRIEGRIIGFDEFMNLVIDDAVEVY
VKEAKPRKELGRILLKGDNITLIQQIQ
NT seq
264 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggccgccagcaacgtgtgatggttcagcccatcaatgtcattttcaaaaactta
cagacacgatcgaaaatttctgtctggctatatgataatattgaaatgcgcattgaaggt
cgtatcattggttttgacgaattcatgaatctcgttatcgatgacgcagtcgaagtctat
gtaaaagaggcaaagccccgaaaagaacttggtcgtatattattgaagggtgataatatc
actctcattcaacaaatccagtga
DBGET
integrated database retrieval system