Agaricus bisporus var. bisporus H97: AGABI2DRAFT189818
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Entry
AGABI2DRAFT189818 CDS
T03140
Symbol
AGABI2DRAFT_189818
Name
(RefSeq) hypothetical protein
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
abv
Agaricus bisporus var. bisporus H97
Pathway
abv03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AGABI2DRAFT189818 (AGABI2DRAFT_189818)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
abv03009
]
AGABI2DRAFT189818 (AGABI2DRAFT_189818)
Ribosome biogenesis [BR:
abv03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
AGABI2DRAFT189818 (AGABI2DRAFT_189818)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp12
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_EML_2
Beta-prop_WDR3_1st
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_Nup120_160
Beta-prop_WDR36-Utp21_2nd
Beta-prop_VPS8
TP_0783
Motif
Other DBs
NCBI-GeneID:
18081242
NCBI-ProteinID:
XP_006454568
JGI:
Agabi_varbisH97_2_189818
LinkDB
All DBs
Position
Unknown
AA seq
767 aa
AA seq
DB search
MASTKLKKKSKQHARPPSMAQISQPAVQDIPTQAASSSFSPSGDYFAYVSLAVDKNRLRV
YNATTGQAIADHVVDIARISSMTWCALDTTAANSSGTPQPSKKKKRKRDSALISDVKNKA
TEIVVLGLSDGRILCFSPSHGRVLYSLSHASSASAILATAVEEYEDQWLVWASGADSTLR
MWDMKTNNIIANWKNDDRIPYTSLKIRPCDVDGRTDILAASHSIYLLSKSASAGTTDPKK
LHKAATFTGHASPVKSTTWDLSKPVPARLFSMAESDRFVYVWDILDSPDVSGKAVASIPL
DAAARSFAVATSAEPTGPSTLLALSASGKITLYHVPDQIITASTSNRSSSTLPTLHFRSS
IIAASESAQSPSDIIDVSFVHGRPGSICVARLVRGIRPVFTTVRYLDDTGRFIENIQLED
VPDVSLEDKQPLIHHQRYSESSVAVGSSMELGYDENPDETTSRNMDGELDVNLVELSLGQ
RLATVTDADYHQPSDSESEDVTHSRSSRVTNKKEKSELDVIPANSLTRTLIQALHSSDTK
LIETCLAHSNSDLIRNTVKRLHSQLAIPLLNACVERLGRGARAANMKGGGAAASAQRGMT
LIIWIRTVLTFHMGHLMTVPDLVARLSGLHATLTARLALQESLLSLSGRLDMVLSQIEMR
SSLPPTIVAATNGKRQGATRENFVKQYVEGESDSSGDDNDQMDVELEIGDDEGSIEDVEL
GGSSEGSEDDQDEDGEEKEEEDDGSGSDGFIDDEAEEYSEDDEDESE
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggcatctacgaagctcaaaaaaaaatccaaacagcatgccagacccccgtccatggca
caaatatcccagccggccgtccaagatatacccactcaagccgcatcctcatccttttca
cccagcggtgattattttgcgtatgtatcccttgcggtggataaaaacagactacgtgtc
tacaatgccaccacaggacaagccattgcagatcacgtcgtcgatattgcacgcatatcc
tctatgacctggtgtgccctagacacaacagcagcgaatagctcaggcactcctcagccg
agcaagaagaagaagaggaaacgtgatagtgctttgatatctgacgtcaaaaataaagcg
actgaaattgtggttttgggcttgtctgatgggaggatcctctgcttttcaccctcacat
ggccgcgtgctgtactcgctatctcacgcatctagtgcttctgcgatcttggctaccgct
gttgaggagtacgaggaccagtggctcgtatgggcgtccggtgcagatagtacacttcgg
atgtgggacatgaagacgaataacattatagcgaattggaaaaacgatgatcggataccc
tacacatctttgaaaatacgaccttgcgatgtagatggccgaactgatattcttgctgca
agtcatagcatctacttgctgtccaagtctgcatcggcaggaacaaccgaccctaagaaa
cttcacaaagcagccacatttaccggacatgcatcccctgtcaaatcgacgacgtgggac
ctttcaaaacctgtgcctgcaaggctcttctctatggctgaatctgaccgcttcgtctac
gtttgggatatccttgactcacctgacgttagtggcaaagctgtagcatctataccacta
gacgctgctgcaaggtcatttgccgttgcgacttctgcagagcctaccggcccttcgacc
ctcctcgctctttcagcatccggaaaaatcaccctataccatgttcctgaccaaatcatc
accgctagcacatcaaaccgttcttcttcaactctacctacacttcattttcggtccagc
atcatagccgcctctgaaagcgcgcaatccccctcagatataatcgacgtatcatttgtg
cacgggagacctggaagtatatgcgtggcgcgacttgtccgaggcattcgaccagtgttc
accacagtgcgctatctagacgacacaggtcgttttatcgaaaatatacaacttgaggac
gtcccggacgtgtcacttgaggacaagcaacctctcattcaccatcagcggtacagtgaa
tcttctgttgcagttggttccagcatggaattaggttatgatgaaaatcccgatgaaaca
acatcccgaaatatggatggggagctcgatgttaatcttgtggaactctctctgggtcag
agattggcaactgtgaccgatgccgattaccatcaaccgtctgatagtgaaagcgaagat
gttactcactcgagaagttctcgagtaacaaacaagaaagaaaaatcggaattggacgtc
attcctgcgaattcactcacacggacactcattcaggctctacattcttctgacacaaaa
ctcatagagacttgtttggctcattcgaattcagacctcattcgaaatacagtcaagagg
ttacattcccagctggccataccgctccttaacgcatgtgttgagaggctgggcagaggt
gcgagagctgctaacatgaaaggtgggggggctgcagcaagtgctcagcgtggtatgacc
ttgatcatctggattaggaccgttctgacctttcacatgggccatcttatgacggtaccg
gatctcgtggctcgactctctggccttcatgccacgttaactgctcgcttggcactccag
gaaagccttctttcactgagtggaaggttggatatggtgctgtcgcagattgagatgcga
tcctcgcttccacctaccatcgttgcagcaacaaatggcaagcgtcaaggtgccacaaga
gagaacttcgtgaaacaatatgttgaaggcgaaagtgactccagcggggatgataacgac
caaatggacgtagaactcgaaataggcgatgatgaaggtagtatagaagacgttgagctt
ggcggtagtagcgaggggagtgaagatgatcaagatgaagatggggaagagaaggaggaa
gaagacgatggttcaggttcggatggcttcatcgatgatgaggctgaagaatatagtgag
gatgatgaagacgagagcgagtga
DBGET
integrated database retrieval system