Agaricus bisporus var. bisporus H97: AGABI2DRAFT190804
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Entry
AGABI2DRAFT190804 CDS
T03140
Symbol
AGABI2DRAFT_190804
Name
(RefSeq) hypothetical protein
KO
K14290
exportin-1
Organism
abv
Agaricus bisporus var. bisporus H97
Pathway
abv03008
Ribosome biogenesis in eukaryotes
abv03013
Nucleocytoplasmic transport
abv03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
AGABI2DRAFT190804 (AGABI2DRAFT_190804)
03008 Ribosome biogenesis in eukaryotes
AGABI2DRAFT190804 (AGABI2DRAFT_190804)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
AGABI2DRAFT190804 (AGABI2DRAFT_190804)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abv03019
]
AGABI2DRAFT190804 (AGABI2DRAFT_190804)
03009 Ribosome biogenesis [BR:
abv03009
]
AGABI2DRAFT190804 (AGABI2DRAFT_190804)
03016 Transfer RNA biogenesis [BR:
abv03016
]
AGABI2DRAFT190804 (AGABI2DRAFT_190804)
03036 Chromosome and associated proteins [BR:
abv03036
]
AGABI2DRAFT190804 (AGABI2DRAFT_190804)
Messenger RNA biogenesis [BR:
abv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
AGABI2DRAFT190804 (AGABI2DRAFT_190804)
Ribosome biogenesis [BR:
abv03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
AGABI2DRAFT190804 (AGABI2DRAFT_190804)
Pre-60S particles
AGABI2DRAFT190804 (AGABI2DRAFT_190804)
Transfer RNA biogenesis [BR:
abv03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
AGABI2DRAFT190804 (AGABI2DRAFT_190804)
Chromosome and associated proteins [BR:
abv03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
AGABI2DRAFT190804 (AGABI2DRAFT_190804)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
mTOR_dom
BID
Motif
Other DBs
NCBI-GeneID:
18081582
NCBI-ProteinID:
XP_006458526
JGI:
Agabi_varbisH97_2_190804
LinkDB
All DBs
Position
Unknown
AA seq
1080 aa
AA seq
DB search
MESLLDFSGEFDVALLDKVVMTFYSSSGSEQQMAQQVLTQFQEHTDSWTRVPDILEKSSY
HQSKYIGLQILEKLILTRWKTLPDGQRQGIRNFVIAITVKIASDEVNLRKEKTYINKLNL
ALVQILKQEWPHNWPNFIPELVESSKSNLALCENNMIILKLLSEEIFDFSAEQMTQTKIR
NLKNQMCGEFSDIFKLCSEVLGQANKTSLIKATLETLLRFLNWIPLGYIFETRVIDLLLT
RFLETPDFRTVTLKCLAEIAALNVGPEYDLKFGALFQMVMTSINRMIPPSTNIAQAYIEA
GDNGQELVLNLALFLSNFLSNHLRAVENDEHKDVLLNAHLYMVKVSQVDEREIFKICLEY
WLKLVAELYEEIQSLPIGESSMLMGLSLGGTNGQSMLNGISLRKNIYSDVLSNLRLVVIE
KMVKPEEVLIVENEEGEIVREFMKEGDTISLYKSMRELLVYLTHLDVTDTETILTEKLAR
QVDGSEWSWNNLNTLCWAIGSISGAMNEDTEKRFLVTVIKDLLGLCEIKRGKDNKAVVAS
DIMYIVGQYPRFLKAHWKFLKTVVNKLFEFMHETHEGVQDMACDTFIKIAQKCRKHFVMQ
QSGESEPFVDDILRSLHRITVDLSPQQVHTFYEAVGYMISAQPNKPQQEKLINKLMELPN
NAWDSLMAQAAQNLDVLSVTDNIKILSNVLKTNVSACTSIGCFYLPQLGRIFLDMLGLYK
AVSGIISETVAKEGLVATRTPKIRQLRTVKKEILKLMETYVKKAEDLEAVNNNFIPPVLD
AILGDYSRNVPAARDAEVLNVMATITTRLQSLLTAQVPAILEAVFEPTLNMINQDFAEFP
EHRVGFFKLLRAINLYCFPALLSIPPAQFKLFMDSIIWAVKHTMRDIADTGLNLCLEIVN
NFANAADRSITDAFFQTYYTTMVQDIFFVLTDADHKSGFKLQSALLARLFQLVELNVIST
PLYDPSNVPDPAKMTNSIFLREYIVNIMKTAFPHVHDSELQTFVNNLKEYYNDLNRFKLA
LRDFLIQLKEFSGDDNAELYLEEREAENARQAELARQQAMRIPGMLKPDQLEDKDEDINL
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atggagtctctacttgatttttcgggagagttcgatgtcgctctcctcgataaggtcgtc
atgacattttattccagctcaggatcagaacaacaaatggcccaacaagtgcttactcag
tttcaggaacacacagattcgtggacaagagtaccagatatcctcgagaagtcgtcgtat
catcaatcaaagtatatcggtctccaaatattagagaaactgattctgacgaggtggaaa
accctcccggatggacagcggcaaggaatacggaattttgttatcgctatcacggtcaaa
atcgcttctgatgaagtcaacctcagaaaagagaagacatacatcaacaaactcaacctc
gcacttgtgcagatactcaaacaagaatggccacacaactggccaaactttattccggag
cttgttgaatcatcgaaatccaacctcgccctatgcgagaacaacatgatcattctcaaa
ttactttctgaagagatttttgacttctccgcagagcaaatgacccaaacaaagatcaga
aatttgaagaatcagatgtgtggcgaattttctgatatcttcaagttgtgctcggaggtt
ctgggacaggcgaataaaacttctcttatcaaagcgactttggaaaccttgttacgtttt
ctcaattggattcccctgggatatatttttgagaccagagtcatcgatcttctgttaacc
cgcttcctcgaaactcccgatttccggacagtgacactaaaatgcctggctgaaatcgct
gctctcaatgtcggacccgaatatgatctcaaatttggtgctctattccaaatggtcatg
acatccatcaaccgtatgattccaccaagcaccaatattgctcaagcctatattgaagct
ggagacaacggtcaagaactagttttaaatctcgcgttattcctttccaacttcttatcc
aaccatctacgggcagtcgagaacgacgaacacaaggacgtactcctcaacgctcatcta
tatatggtcaaagtttcccaagtagacgaacgtgaaatcttcaaaatctgcttagaatac
tggttaaagcttgtagcggagctctatgaagagatacagagcttacccattggcgagtca
agtatgttgatgggactgagcttgggtggcaccaatggacagagtatgttgaacggcata
tctttgcggaagaacatctatagcgacgtgttatcaaacttgcgtttggtggtcattgag
aagatggtgaaaccagaggaggtcttaatcgtcgaaaatgaagagggagagattgtgcgt
gaattcatgaaggagggcgatacaatctctctttacaagtccatgagggagttactcgtt
tacctgacgcacttggacgttacggacacggagactattctcactgaaaaacttgccaga
caggttgatggatctgaatggtcttggaataacctcaatactctctgttgggccatcggt
tcgatttcaggtgccatgaacgaggatacggagaagcgtttcttagtgaccgtcatcaaa
gatctcctggggctttgcgagattaaacgcggcaaagataacaaagctgtcgtcgcctcc
gacatcatgtacatcgttggccagtatccccgcttccttaaagcgcattggaaattcctg
aagacagtcgttaacaaattattcgaattcatgcacgaaacacatgaaggggtccaggat
atggcttgcgatacgttcatcaagattgcacagaaatgcagaaaacattttgtcatgcaa
caaagtggtgaatctgagcctttcgtggacgacattctccggtcattacatcgtatcact
gtggacctgtccccgcaacaagtgcacaccttttatgaagctgttggctacatgatatcc
gcccaacccaacaaacctcaacaggaaaagctcataaataaattgatggagctcccgaat
aatgcttgggattctctcatggctcaagctgcacaaaatctcgatgttctatcggttact
gataacatcaagattctttctaacgtgttgaaaacgaacgtctctgcatgtacttcaatc
ggctgtttctatcttccccagctcggtcgcattttccttgatatgctggggttgtataaa
gctgttagcggaattatcagtgagactgtagccaaagaaggactcgttgcgacgcgaacg
ccgaagatccgacaactgaggaccgtgaaaaaagaaatcctgaaactgatggaaacgtat
gtcaagaaagcggaagaccttgaggcagtcaacaataattttatccctccggtcttggat
gccattctcggcgattatagtcgtaacgtccctgcggctcgcgatgcggaagttttgaac
gtgatggccaccatcacgactcgcctacagagcctcttaacagcacaagttcccgcaatc
ctggaagctgtctttgaacctactcttaacatgataaaccaagatttcgcggaattcccc
gaacaccgtgttggattctttaagcttctccgtgctattaatctctattgtttcccagcc
ctactcagcattcctccagctcaattcaagctatttatggatagtatcatttgggctgtc
aaacatacgatgcgtgacattgcggacactggcctcaatctttgtctggaaatagtgaac
aactttgctaacgccgcggaccgctcaatcactgatgccttcttccaaacatactacacg
actatggtccaggatatcttcttcgttttgacagacgctgatcacaagagtggcttcaaa
ttgcaaagcgcattgctcgctcgcctgtttcagcttgttgagctcaacgttatatcgact
ccattatacgatccttcgaatgttcctgacccagcaaagatgaccaactcgatattcctc
cgtgaatatattgttaacataatgaagaccgcattccctcacgtccacgattccgaactt
caaaccttcgtcaacaacctcaaagaatattataatgatctaaaccgtttcaaactagcg
cttcgcgatttccttattcaactgaaagaattctcaggagatgacaatgccgaattatac
ttggaggagagggaagctgagaacgcaagacaagctgaactcgcccgccaacaagctatg
cggattcctggaatgctgaaaccagatcagttagaagacaaggatgaggacataaatctt
tga
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integrated database retrieval system