KEGG   Agaricus bisporus var. bisporus H97: AGABI2DRAFT191437
Entry
AGABI2DRAFT191437 CDS       T03140                                 
Symbol
AGABI2DRAFT_191437
Name
(RefSeq) hypothetical protein
  KO
K10756  replication factor C subunit 3/5
Organism
abv  Agaricus bisporus var. bisporus H97
Pathway
abv03030  DNA replication
abv03410  Base excision repair
abv03420  Nucleotide excision repair
abv03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:abv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AGABI2DRAFT191437 (AGABI2DRAFT_191437)
   03410 Base excision repair
    AGABI2DRAFT191437 (AGABI2DRAFT_191437)
   03420 Nucleotide excision repair
    AGABI2DRAFT191437 (AGABI2DRAFT_191437)
   03430 Mismatch repair
    AGABI2DRAFT191437 (AGABI2DRAFT_191437)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:abv03032]
    AGABI2DRAFT191437 (AGABI2DRAFT_191437)
   03036 Chromosome and associated proteins [BR:abv03036]
    AGABI2DRAFT191437 (AGABI2DRAFT_191437)
   03400 DNA repair and recombination proteins [BR:abv03400]
    AGABI2DRAFT191437 (AGABI2DRAFT_191437)
DNA replication proteins [BR:abv03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    AGABI2DRAFT191437 (AGABI2DRAFT_191437)
  DNA Replication Termination Factors
   ELG1-RFC complex
    AGABI2DRAFT191437 (AGABI2DRAFT_191437)
Chromosome and associated proteins [BR:abv03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    AGABI2DRAFT191437 (AGABI2DRAFT_191437)
DNA repair and recombination proteins [BR:abv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     AGABI2DRAFT191437 (AGABI2DRAFT_191437)
  Check point factors
   HRAD17(Rad24)-RFC complex
    AGABI2DRAFT191437 (AGABI2DRAFT_191437)
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 AAA Rad17 AAA_assoc_2 AAA_22 AAA_16 Rep_fac_C
Other DBs
NCBI-GeneID: 18081800
NCBI-ProteinID: XP_006459470
JGI: Agabi_varbisH97_2_191437
LinkDB
Position
Unknown
AA seq 355 aa
MSLWVDKYRPKNLQELHYHHALSKRLKSLASGDFPHILFYGPSGAGKKTRIACTLREIYG
PGAEKLKIDQRIFLSPSRRKLEINLTQSNYHIEITPSEAGNYDRVVIQEILKEIAQTQQV
DLNAKQRFKIVVINEADSLSRDAQAALRRTMEKYMSNMRIILCANSTSRLIAPIKSRCLL
VRVAAPNADEMAAVLNSIAGRENFQLPEEAARQIIEDSNGNMRKALLVMEALKMQSPNLT
GPLTIAKPDWETYCHKVADLIVSEQSPSRIMEVRNKFYELLSHCIPPTVILKTVAERVVE
RVDESLKADIMHWAAFYETRMRIGNKKIYHLEAWVVKVMSLYKQFFYGFDMSSFD
NT seq 1068 nt   +upstreamnt  +downstreamnt
atgtcgctttgggtggacaagtaccgtcccaaaaacctccaggagctccattaccaccat
gcattatcaaagcgtttgaagtcattggcctctggggattttccacatatactattctat
ggtccttccggcgcgggcaaaaagactcgtatagcttgcacgctgagagaaatctacggg
cctggagccgaaaaactaaaaatcgaccaacgaatctttctttcgccttctcgccgtaaa
ctagagatcaatttgacccagagcaattaccacattgagatcacgcccagtgaagccgga
aattatgaccgagttgttatccaagagattctgaaagaaatcgcgcaaacacagcaggtt
gacttgaacgccaaacaacgtttcaaaattgttgtcataaacgaagcggattcgctttcg
cgagatgctcaagctgcacttcgacgaacgatggaaaaatacatgtcgaacatgcgaatt
atactttgtgcgaacagtactagccgtctaattgctccgatcaaaagtagatgtctattg
gtacgagtagcggcaccgaatgcggacgagatggccgctgtactcaactccattgctggc
cgagaaaattttcaattacctgaggaagcagcaagacaaattattgaagattcaaatggg
aacatgagaaaagcacttttggttatggaagccctgaaaatgcagtcaccaaatctgaca
ggcccactgacaatcgcgaaaccagactgggaaacctattgccataaggttgctgatctg
atcgtttctgaacaatctccctcccgaataatggaagtccgcaacaagttttatgaactt
ctaagtcactgcattcctcccacagtgatcctcaagactgtcgccgagcgtgttgttgaa
cgcgtggatgagagtctgaaagccgatatcatgcattgggcagctttttacgaaacgagg
atgcggattggaaacaagaagatctatcaccttgaagcttgggtggtcaaagtgatgagc
ctctacaagcaattcttctatggttttgacatgagcagtttcgattag

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