Agaricus bisporus var. bisporus H97: AGABI2DRAFT192038
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Entry
AGABI2DRAFT192038 CDS
T03140
Symbol
AGABI2DRAFT_192038
Name
(RefSeq) hypothetical protein
KO
K18748
protein SSD1
Organism
abv
Agaricus bisporus var. bisporus H97
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abv03019
]
AGABI2DRAFT192038 (AGABI2DRAFT_192038)
Messenger RNA biogenesis [BR:
abv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
AGABI2DRAFT192038 (AGABI2DRAFT_192038)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
Dis3l2_C_term
OB_Dis3
CSD2
Rrp44_CSD1
Rrp44_S1
Motif
Other DBs
NCBI-GeneID:
18082007
NCBI-ProteinID:
XP_006460291
JGI:
Agabi_varbisH97_2_192038
LinkDB
All DBs
Position
Unknown
AA seq
1257 aa
AA seq
DB search
MGADQKHRKAASLGNSALSGNFNSFSPHLGATIEEDGNGSYEEGEIPERFITPSSHQLRS
QSQSFVPPRFAALAAQQQEHFDAVGPTGRPQLAPDFMFGASQRKRAPQVGPSINEEDVGF
QFPQQNQAPTEFPGQDVSQRKAESGEITGIMAEQIAIQQQIEALQQQQQALYQQQLASGS
VLSFQTPGLGPNRGAHRRVQSTMANPNVNFQNPMGQFGNLASLNMNLDGQSPTVPRGHGR
RHSVNVVNKNIGNSGNGNPGTFAFPSTQEGYEDGFVAPPGLNGGHSRQVSRADSTWRING
GVGSVQNTNAFAADLAQAQAQLQSLQQFRAAAGGHHHKMPSFSFPNMLPNMMAANMMGLG
LGGINLLQQQQQQFQTQLQQQASQPQRKSLFAPYLPQASLPPLLAAGKLVVGILRVNKRN
RSDAYVATEVLDADIYICGSKDRNRALEGDIVAVELLDVDEVWGTKKEKEEKKRKKEENS
AYDSKVGRKDDKKKDDVEVEGQGLMLFEDEEVTDEVKPQFAGHVVAVVERMPGQLFSGTL
GLLRPSSAATKEKQEAERREREGDRAEEPRRGPIERPKIVWFKPTDKRVPLIAIPTEQAP
PDFVQNSDAYANRLFVACIKRHPISSLHPFGTLVEELGPIGDIEVETSALLKDCNFPTEE
FSDNVLKCIPPVPWAIPEHEFKGRQDLRDQRIITLDPEDAKDLDDALSVKINDDGTYDVG
VHIADVSYFVKPNTALDRDARKRATSVYLVQRAVPMLPPMLCEQLCSLLPGQERLTFSVV
YTMTKDAKVLKKWFGKTVIKSAGRISYREAQNVLDGKPLSTAFTIPEHDTQDIRRDIMVL
FDLARQLRLERMRNGALIVDSMRLKFQLDDNGLPTDCREYDKYDSNTLVEEFMLLTNLSV
AQHVAVHLPEQTLLRRHDSPLERRLINFVKRAERLGFQIDTSSASALMKSLDTITDPTAR
KLLQLLCYKATQRAKYFCAGMLDIAKYQHYALNQPLYTHFTSPIRRYADILVHRQLDAVL
QGGVDTKFTMDRDAVAKVAQQCNIKNDSAALAQGQSAHLFLCVLISDLTYRYGPVIRQAK
VINVLEAAFDVLVPEFGIEKRVHVDQMPIDNHVYEEHTDTLQIYWSDRDVITWLAENSDD
EHLKKVKQNAEQHALKMEVASRSVHDENALFDDNDDDEIVLGRDQEAVVLETSKQRLLSM
AKVKPEFEGLRTTSAGHKIQDIRELMTVPVIVTADLTKSPPVIKVYSVNPYAAAEKH
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgggagcggaccagaaacaccgcaaggctgcatcacttggtaattccgccttatccgga
aatttcaactccttttctcctcacctcggtgccacaatcgaggaggatggaaatggctcc
tatgaggagggggagattccagagcgtttcatcaccccttcgagtcaccaattacgcagc
caatcacagagctttgttcctcctcgttttgctgcccttgcagctcaacaacaagaacat
tttgacgctgttggacccaccggtcggcctcagctggcgcccgatttcatgttcggtgcc
agtcaacgtaagcgtgctccgcaagtgggaccgtccatcaacgaagaagacgtgggtttc
caatttccccagcaaaaccaagcaccgactgagtttcctggtcaagatgtgagtcaaaga
aaggcagagagtggagaaatcaccggtatcatggctgaacaaattgccatccaacaacaa
attgaagcacttcaacagcaacaacaggcgctctatcagcaacagttagcctccggttca
gttctttctttccagacaccaggcctgggtccaaatcgtggagcacataggagggttcaa
agcactatggctaaccctaatgtcaactttcagaaccctatgggtcagtttggaaacctc
gcgagcctgaatatgaaccttgatggacagtcgccaactgtgcctcgtggtcatggtcgt
agacacagcgttaacgttgtcaacaagaacatcggcaactctggaaatggaaatcctggc
acttttgcctttccctctactcaggagggttatgaagacggattcgttgcccctcctgga
ttaaatggcggtcattcgaggcaagtttcacgggctgactctacatggcgtatcaatggc
ggtgttggcagtgttcaaaacacaaacgcgttcgcagctgacttggcccaagcccaggct
caattacaaagcttgcagcagttccgtgccgctgcgggtggccatcatcacaagatgcca
tcttttagtttccccaatatgctgccgaatatgatggccgcaaacatgatgggtcttggt
cttggaggaattaatctcttgcagcagcagcaacagcagttccaaactcagcttcagcaa
caggcaagccaaccccagcgcaaatctcttttcgctccttatctcccgcaagcctcgctt
cctcctcttctagctgctggaaaattggtcgttggcatactccgcgttaacaagaggaat
cgatcagatgcctatgttgccactgaggttcttgatgcggacatctatatatgtggttca
aaggaccgtaatcgtgccttagaaggtgatatcgttgccgtcgaactccttgatgtcgat
gaagtctggggaaccaagaaagagaaggaagaaaagaagaggaagaaggaggaaaattct
gcttatgattcgaaagtcggtcgcaaggatgacaagaaaaaggatgacgtagaagtcgag
ggtcaaggtctgatgttatttgaggatgaagaggttacagacgaggtcaagcctcaattc
gctggtcacgttgtggcagttgttgagcgtatgcctggccaactcttttccggaacttta
ggtctccttcgtccatcttctgctgcgacgaaagaaaaacaagaggccgaaagacgcgaa
agagaaggcgatcgtgctgaagaaccacgtcgcggaccgattgagcgtccaaagattgtc
tggtttaaacctacggacaaacgcgtccccctcattgcaatccctactgaacaagcacct
cccgattttgtgcagaattctgacgcttatgccaacagactcttcgttgcctgcatcaaa
cgccatcctatcagctccttacatcccttcggcacactcgttgaagagcttggccctatt
ggtgacattgaagttgaaaccagcgccttgctcaaagactgcaatttccctacggaagaa
ttctcggataatgtactcaagtgcattcctccagttccttgggccattcctgagcacgaa
ttcaagggtcgtcaagacctgcgtgatcagaggattatcacactggatcctgaagatgct
aaagacctcgatgatgcattgtctgtcaagatcaacgatgacggtacttatgatgttggt
gttcatattgccgatgtctcttacttcgtcaaaccaaacaccgccctggatcgcgacgcc
cgcaaacgtgctaccagtgtctaccttgtgcagagagctgtcccgatgctccctcccatg
ctttgcgaacagttatgtagccttttgcccggccaagagcgtctcaccttctctgtcgtc
tacaccatgacaaaagatgctaaagtgcttaagaagtggtttgggaagactgtcatcaag
tctgccgggagaatttcataccgcgaagcgcaaaatgttcttgatgggaagcctttgagt
acagcatttactattcccgaacatgatactcaggacatccgtcgtgatatcatggtgttg
tttgacttagcgcgacagcttcgcttggaaaggatgcgcaacggcgctcttatagtagat
tctatgcgcctcaaattccagcttgacgacaatgggcttccgactgattgtagagagtat
gacaaatatgattccaacactctagttgaggagtttatgctcctgaccaacttatccgtt
gctcaacacgtcgccgtccatttgccagaacaaactctcttgcgccgccatgatagccct
cttgaacgtcgtcttattaacttcgttaaacgtgcggagcgactgggcttccaaatcgat
acatcctctgctagtgctctcatgaaatcccttgatacgattacggacccgacggctcgt
aagcttctgcaactgctttgttataaagccacacaacgcgccaagtacttctgcgcggga
atgctggacattgctaaatatcagcactatgctttgaatcaacccctctacactcatttt
acctcacctatccgccgctatgccgatatacttgttcatcggcaactggatgccgtttta
caaggaggagtcgataccaagttcaccatggatcgagacgccgttgccaaggtcgctcag
cagtgcaatattaaaaacgactctgctgctctcgcccagggacaatcagcccatcttttc
ttgtgtgttctcatatccgatttaacttaccgctatgggcctgttatccgtcaagcaaag
gttatcaacgttctggaagctgcttttgatgtgttagtgcctgaattcggaatcgagaag
cgggttcatgtggatcaaatgcccatagacaaccacgtttatgaagagcataccgacaca
ttgcaaatctattggtccgaccgcgatgtgataacttggctagcggaaaatagtgatgat
gaacatttgaagaaggtcaagcaaaacgcggaacaacatgcacttaagatggaagtcgct
tctcgttctgttcatgatgagaatgcattgttcgacgataatgatgacgacgagattgtg
cttggaagagaccaagaagccgttgttctggagacttcgaagcaacgattgttgtccatg
gcaaaggttaaacccgaatttgaaggattgaggacgacgtctgcaggacataagatacaa
gatattcgagagctcatgactgttcctgtcatcgttaccgcggatctgacgaagagtccc
cctgtcatcaaagtctacagcgtgaacccgtacgcggccgcggagaagcattaa
DBGET
integrated database retrieval system