Agaricus bisporus var. bisporus H97: AGABI2DRAFT192916
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Entry
AGABI2DRAFT192916 CDS
T03140
Symbol
AGABI2DRAFT_192916
Name
(RefSeq) hypothetical protein
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
abv
Agaricus bisporus var. bisporus H97
Pathway
abv03018
RNA degradation
abv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AGABI2DRAFT192916 (AGABI2DRAFT_192916)
09123 Folding, sorting and degradation
03018 RNA degradation
AGABI2DRAFT192916 (AGABI2DRAFT_192916)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abv03019
]
AGABI2DRAFT192916 (AGABI2DRAFT_192916)
03041 Spliceosome [BR:
abv03041
]
AGABI2DRAFT192916 (AGABI2DRAFT_192916)
Messenger RNA biogenesis [BR:
abv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
AGABI2DRAFT192916 (AGABI2DRAFT_192916)
mRNA degradation factors
5'-3' decay
Lsm complex
AGABI2DRAFT192916 (AGABI2DRAFT_192916)
Spliceosome [BR:
abv03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
AGABI2DRAFT192916 (AGABI2DRAFT_192916)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
18082322
NCBI-ProteinID:
XP_006461412
JGI:
Agabi_varbisH97_2_192916
LinkDB
All DBs
Position
Unknown
AA seq
131 aa
AA seq
DB search
MLPLSLLSAAQNKPMLVELKNGETFNGHLVNCDNFMNITLREVYQTSADGDRFWKLKECY
IRGSTIKYLRVPDTLLDQVKEEQNRAREANRNSRGGHTGPNRGGRGAPIRGSRGGGRGGP
LRGGRGRGRGL
NT seq
396 nt
NT seq
+upstream
nt +downstream
nt
atgctgcctctatccctcctcagtgctgctcaaaacaagcccatgttggtcgagctcaag
aacggcgagactttcaacggccatctcgtaaactgcgacaactttatgaacatcaccctc
agagaggtgtatcagacaagcgccgatggggatagattctggaaactcaaggaatgctac
atcagaggaagcacgataaaatacctacgcgtcccagataccctcctcgaccaagtgaag
gaggaacaaaatcgcgctcgggaagccaacaggaattctcgcggaggacacacaggacct
aatagaggtggtcgtggtgcgcctatcagaggttctcgaggaggtggccgcggcggtccc
ctacgcggcggtagaggtcgtggacgtggattatga
DBGET
integrated database retrieval system
