Agaricus bisporus var. bisporus H97: AGABI2DRAFT193430
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Entry
AGABI2DRAFT193430 CDS
T03140
Symbol
AGABI2DRAFT_193430
Name
(RefSeq) hypothetical protein
KO
K03679
exosome complex component RRP4
Organism
abv
Agaricus bisporus var. bisporus H97
Pathway
abv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AGABI2DRAFT193430 (AGABI2DRAFT_193430)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abv03019
]
AGABI2DRAFT193430 (AGABI2DRAFT_193430)
Messenger RNA biogenesis [BR:
abv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
AGABI2DRAFT193430 (AGABI2DRAFT_193430)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
AGABI2DRAFT193430 (AGABI2DRAFT_193430)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
18082481
NCBI-ProteinID:
XP_006462128
JGI:
Agabi_varbisH97_2_193430
LinkDB
All DBs
Position
Unknown
AA seq
305 aa
AA seq
DB search
MITFAPFPAAPHVGGYNQPHHPYNLSEDVEMDLDLDELDGDGSNLTCPGESLTSSQAFMR
GHGTYVNDEEVIASVTGTIERVNKLVTVRAIRSRYNPEVGDLVVGRITEVQPRRWKVDAN
SRQDAVLMLSSVNLPGGVQRRKLESDELQMRSFFEEGDLLVAEVQAFFADGAMSLHTRSL
RYGKLRNGQLVAVPPILVRRLKSHFISLPCGVDLILALNGYIWISKHVKQNYQEGEGFDA
EGVYSNINDEIDEATRTAISRVTNIVRLLASHFIPLTDTILVEAYDWTVDQEGGVKDLLS
EEFGD
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgatcacctttgcaccctttcctgcagcacctcatgtcggaggatacaaccagccgcac
catccttacaacctttcagaagatgtcgaaatggatttggacttggacgaactcgacggc
gatggatcaaatctcacttgccccggtgaatcattgacatcgtcccaggctttcatgcgc
ggacatgggacttatgtcaacgatgaagaggttattgcttccgtgactggtaccattgaa
cgtgtcaataaactggtaaccgttcgcgcgattcgcagccggtataatccagaagttggt
gatttggtggtcggacgtatcacagaggtacaacctcggagatggaaagtggatgcaaac
tcgagacaagatgctgttctaatgctgtcctctgtcaacctaccgggaggcgtccagcga
cggaaactagaaagcgacgagcttcaaatgcgcagctttttcgaagagggtgacctcctg
gttgcagaagttcaagcgttctttgctgatggcgctatgtcgctacatacccggtctctc
agatatggcaagctacgaaatggacaacttgttgctgtgccgcctatccttgttcgacgt
ctaaagtcccactttatctcccttccgtgcggtgtcgatctcattctcgcattaaatggc
tacatctggattagcaaacatgtcaaacagaattaccaagagggggagggattcgatgcc
gagggcgtctattccaacatcaacgacgaaatagacgaagcaactcgaaccgctatttct
cgtgttaccaacatagtacggctactagcatcccatttcatccctctgaccgataccata
ttggtcgaggcatatgattggaccgttgaccaggaaggtggagtgaaagatttactttcg
gaggaatttggtgat
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integrated database retrieval system