KEGG   Agaricus bisporus var. bisporus H97: AGABI2DRAFT193430
Entry
AGABI2DRAFT193430 CDS       T03140                                 
Symbol
AGABI2DRAFT_193430
Name
(RefSeq) hypothetical protein
  KO
K03679  exosome complex component RRP4
Organism
abv  Agaricus bisporus var. bisporus H97
Pathway
abv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:abv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AGABI2DRAFT193430 (AGABI2DRAFT_193430)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:abv03019]
    AGABI2DRAFT193430 (AGABI2DRAFT_193430)
Messenger RNA biogenesis [BR:abv03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     AGABI2DRAFT193430 (AGABI2DRAFT_193430)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     AGABI2DRAFT193430 (AGABI2DRAFT_193430)
SSDB
Motif
Pfam: RRP4_S1 KH_6 ECR1_N RRP40_S1
Other DBs
NCBI-GeneID: 18082481
NCBI-ProteinID: XP_006462128
JGI: Agabi_varbisH97_2_193430
LinkDB
Position
Unknown
AA seq 305 aa
MITFAPFPAAPHVGGYNQPHHPYNLSEDVEMDLDLDELDGDGSNLTCPGESLTSSQAFMR
GHGTYVNDEEVIASVTGTIERVNKLVTVRAIRSRYNPEVGDLVVGRITEVQPRRWKVDAN
SRQDAVLMLSSVNLPGGVQRRKLESDELQMRSFFEEGDLLVAEVQAFFADGAMSLHTRSL
RYGKLRNGQLVAVPPILVRRLKSHFISLPCGVDLILALNGYIWISKHVKQNYQEGEGFDA
EGVYSNINDEIDEATRTAISRVTNIVRLLASHFIPLTDTILVEAYDWTVDQEGGVKDLLS
EEFGD
NT seq 915 nt   +upstreamnt  +downstreamnt
atgatcacctttgcaccctttcctgcagcacctcatgtcggaggatacaaccagccgcac
catccttacaacctttcagaagatgtcgaaatggatttggacttggacgaactcgacggc
gatggatcaaatctcacttgccccggtgaatcattgacatcgtcccaggctttcatgcgc
ggacatgggacttatgtcaacgatgaagaggttattgcttccgtgactggtaccattgaa
cgtgtcaataaactggtaaccgttcgcgcgattcgcagccggtataatccagaagttggt
gatttggtggtcggacgtatcacagaggtacaacctcggagatggaaagtggatgcaaac
tcgagacaagatgctgttctaatgctgtcctctgtcaacctaccgggaggcgtccagcga
cggaaactagaaagcgacgagcttcaaatgcgcagctttttcgaagagggtgacctcctg
gttgcagaagttcaagcgttctttgctgatggcgctatgtcgctacatacccggtctctc
agatatggcaagctacgaaatggacaacttgttgctgtgccgcctatccttgttcgacgt
ctaaagtcccactttatctcccttccgtgcggtgtcgatctcattctcgcattaaatggc
tacatctggattagcaaacatgtcaaacagaattaccaagagggggagggattcgatgcc
gagggcgtctattccaacatcaacgacgaaatagacgaagcaactcgaaccgctatttct
cgtgttaccaacatagtacggctactagcatcccatttcatccctctgaccgataccata
ttggtcgaggcatatgattggaccgttgaccaggaaggtggagtgaaagatttactttcg
gaggaatttggtgat

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