Agaricus bisporus var. bisporus H97: AGABI2DRAFT193432
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Entry
AGABI2DRAFT193432 CDS
T03140
Symbol
AGABI2DRAFT_193432
Name
(RefSeq) hypothetical protein
KO
K12876
RNA-binding protein 8A
Organism
abv
Agaricus bisporus var. bisporus H97
Pathway
abv03013
Nucleocytoplasmic transport
abv03015
mRNA surveillance pathway
abv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AGABI2DRAFT193432 (AGABI2DRAFT_193432)
09122 Translation
03013 Nucleocytoplasmic transport
AGABI2DRAFT193432 (AGABI2DRAFT_193432)
03015 mRNA surveillance pathway
AGABI2DRAFT193432 (AGABI2DRAFT_193432)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abv03019
]
AGABI2DRAFT193432 (AGABI2DRAFT_193432)
03041 Spliceosome [BR:
abv03041
]
AGABI2DRAFT193432 (AGABI2DRAFT_193432)
Messenger RNA biogenesis [BR:
abv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
AGABI2DRAFT193432 (AGABI2DRAFT_193432)
Spliceosome [BR:
abv03041
]
Complex C
Other components
EJC/TREX
AGABI2DRAFT193432 (AGABI2DRAFT_193432)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
Motif
Other DBs
NCBI-GeneID:
18082482
NCBI-ProteinID:
XP_006462130
JGI:
Agabi_varbisH97_2_193432
LinkDB
All DBs
Position
Unknown
AA seq
163 aa
AA seq
DB search
MSEDEMNIDDVEAGGAVRRRGRGFQNTGDNDLKSSTDATYDRVESTTTGADTRAARSVEG
WIVLVTNVHEEATEEDVQDKFAEFGEIKNLHLNLDRRTGYVKGYTLVEYETMGEAQAAID
GASGTTLLEQTVQCDYAFVRPPPTGPKKGRMRGRSASPARRAK
NT seq
492 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagatgaaatgaatattgacgacgtcgaggccggaggtgccgttcgtaggaga
ggaagaggttttcaaaacacaggcgacaacgacctaaaatcgtcgactgacgcgacctac
gatcgagtagagtccactacgacaggcgccgacaccagggctgcacgatctgtcgaagga
tggatcgtgttagtcaccaacgtccacgaagaagcaacggaggaggatgtgcaagacaaa
tttgcagaattcggagaaataaaaaacctccatctcaatctcgaccgtcggacgggttat
gtgaagggttataccctcgttgaatacgagactatgggtgaagcccaggccgcaattgac
ggtgcctctggaactacactactggagcagacggtgcagtgtgattacgcctttgttcgt
ccccctccgactggtcccaagaaaggtagaatgcggggtcgtagtgccagtccagcccgt
cgcgccaagtag
DBGET
integrated database retrieval system