Agaricus bisporus var. bisporus H97: AGABI2DRAFT193591
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Entry
AGABI2DRAFT193591 CDS
T03140
Symbol
AGABI2DRAFT_193591
Name
(RefSeq) hypothetical protein
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
abv
Agaricus bisporus var. bisporus H97
Pathway
abv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AGABI2DRAFT193591 (AGABI2DRAFT_193591)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abv03019
]
AGABI2DRAFT193591 (AGABI2DRAFT_193591)
Messenger RNA biogenesis [BR:
abv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
AGABI2DRAFT193591 (AGABI2DRAFT_193591)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
AGABI2DRAFT193591 (AGABI2DRAFT_193591)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
18082533
NCBI-ProteinID:
XP_006462447
JGI:
Agabi_varbisH97_2_193591
LinkDB
All DBs
Position
Unknown
AA seq
648 aa
AA seq
DB search
MNRPAFPTPGQPQQRPPNLTSNPALANQFRAPFPNYGLPPRNVNVLQGGGFVPTLQPNTH
RTPSQAQVQSMTSQPAPGFLPSRGQGIHAFGGALGQHQTASTLQQQMQSQQSNGTAQSVT
SSDAVSLDPNDFPALGSNPTTNPTGSSNNGGTGNGQSYASQAGTGVQIGGSGAVGSSGST
GVAGTGNANQPRDFTADDFPALGGQSQSQNQTSSAQNPNSAQESHSHPPGLNGFPHTDHS
QHQHRQNLLGALGGSIPPGTPGMLNLAGTQSRNVHPGFQQGQGDDKQQQHQRSNYALKLN
QSSHPAWSSPTPNPPPTSANTNSNGTHLQSISTHPNVPPGVPSPSTGPFPQTPGLGTNSG
GVTQSTPFPPNGVAPGDSHVNASSHPPSNPNTSTNQNTSSLQNSAVSHHPHPQTPAQQVL
ISPADRWGLLGLLEMIKNASSDVDGGLSSMGTDLGTMGLDMNYPGSLYQTFITPWADQSA
AHSVEPDFNLPACYLSVQAAAPGLLKASAFSDETLFFMFYSSPRDALQEVAAQELFNRNW
RYHKELRLWITKETGTTPSQKVQGGEQGQYTFWDPENWCKERKEMTVLYVDLEEKSQPAF
ANSQSLVPANQSQNAPQQQQQQSVQAQLNAQVQATQRGASFQMGMASL
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaccagcctttccaacgccaggccaacctcagcagagaccaccgaaccttacc
agcaacccagcactcgcgaatcaattccgtgcaccgtttccaaattacggtctaccgccg
cgaaacgtcaatgtcctccagggaggcggtttcgtgcctacgctgcagccaaacacccac
agaacaccctcgcaggcacaagtgcagtccatgacctcgcagccggcaccaggtttcctc
ccatcgaggggacagggcatccatgctttcggaggagcacttggccaacatcaaacggca
agtacgctacaacaacagatgcagtcacaacagagtaatggcacagcgcagtcagtgaca
tctagcgacgccgttagcttggacccgaatgacttccccgcacttggatcaaatccaaca
acgaacccaacaggaagcagtaacaatggggggactgggaatggacagagttacgcaagc
caggctggaacaggcgtgcaaataggcggttcaggggcggtaggctcatcgggatcgact
ggtgtagcgggaacagggaacgcgaatcaacctcgagatttcactgccgatgatttccct
gcgcttgggggacagagtcagtcacaaaatcagacttcgtcggcacaaaacccaaattcg
gctcaagagagccattcacatcctccgggattgaatggcttcccacatacggatcactct
cagcatcaacaccgacaaaatcttctgggggcgttaggtggcagcataccacctggtacg
ccaggcatgcttaacctcgctggcactcagtcgaggaatgtgcatcccgggtttcaacag
gggcaaggagatgataaacagcagcaacaccagcggagcaactatgctcttaagctgaat
caatcctctcacccagcatggagttctccgacgcccaatcctccaccaacatcagcgaac
accaattcaaatgggacacatttacagagcatatcgacgcatcctaacgtgccgccgggt
gtaccttcaccgtcaacgggaccatttccacagacaccagggcttggaacgaatagcgga
ggtgtgacacagtcaacgccttttccaccaaacggtgtagcgccaggggattcgcacgtg
aacgcatcttcgcaccctccttcgaatccgaatacatcaacaaaccagaacacatcatca
cttcaaaacagcgcagtatcgcatcatcctcatccgcagacgccggcgcaacaagtactg
ataagtccagcagatagatggggactcctagggttgctggaaatgatcaagaatgccagt
tcagatgtggacgggggacttagtagtatggggactgacctgggtaccatgggcttggac
atgaattatccagggagtctgtatcaaacattcattacaccttgggcggatcagtcagcg
gcacactcagtagaaccagacttcaacctgcctgcttgctacctaagtgtacaagcagca
gcaccagggcttttaaaagcgtcagcgttcagtgatgagacgcttttctttatgttctat
tcgagtccacgagatgccctacaggaagtggcggcgcaagaactcttcaaccgtaactgg
cgctatcacaaagaactccgactctggatcacgaaggaaaccggcacaacaccttcacag
aaagtacaaggaggcgaacaaggacaatacactttctgggaccctgaaaattggtgcaag
gagagaaaggaaatgacggtgctatatgtcgacctggaagaaaagagccaaccggcgttt
gcgaactcgcagagcctcgtgccggcaaatcaaagccagaatgcccctcaacagcagcag
cagcagtctgtacaggctcagctgaatgcacaagtacaagcaacacaacgaggagcttca
ttccaaatggggatggcgagtttgtga
DBGET
integrated database retrieval system
