Agaricus bisporus var. bisporus H97: AGABI2DRAFT193982
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Entry
AGABI2DRAFT193982 CDS
T03140
Symbol
AGABI2DRAFT_193982
Name
(RefSeq) hypothetical protein
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
abv
Agaricus bisporus var. bisporus H97
Pathway
abv03030
DNA replication
abv03410
Base excision repair
abv03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AGABI2DRAFT193982 (AGABI2DRAFT_193982)
03410 Base excision repair
AGABI2DRAFT193982 (AGABI2DRAFT_193982)
03450 Non-homologous end-joining
AGABI2DRAFT193982 (AGABI2DRAFT_193982)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abv03032
]
AGABI2DRAFT193982 (AGABI2DRAFT_193982)
03400 DNA repair and recombination proteins [BR:
abv03400
]
AGABI2DRAFT193982 (AGABI2DRAFT_193982)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
abv04147
]
AGABI2DRAFT193982 (AGABI2DRAFT_193982)
DNA replication proteins [BR:
abv03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
AGABI2DRAFT193982 (AGABI2DRAFT_193982)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
AGABI2DRAFT193982 (AGABI2DRAFT_193982)
DNA repair and recombination proteins [BR:
abv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
AGABI2DRAFT193982 (AGABI2DRAFT_193982)
Exosome [BR:
abv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AGABI2DRAFT193982 (AGABI2DRAFT_193982)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-GeneID:
18082667
NCBI-ProteinID:
XP_006462925
JGI:
Agabi_varbisH97_2_193982
LinkDB
All DBs
Position
Unknown
AA seq
429 aa
AA seq
DB search
MGIKGLTGLISQHAPAAIREHEIKTLFGRKVAIDASMSIYQFLIAVRQKDGEMLSNDAGE
TTSHLMGFFYRTIRIVENGIKPAYVFDGKPPDLKKGVLSKRFERREEAKEEGEEAKETGT
VEEVDKLSRRTVKVTKEHNAECIRLLKLMGIPVVVAPSEAEAQCAELARGGKVYAAGSED
MDTLTFNAPILYRHLTFSEAKKQPISEINLEVALKGLEMNMSQFIDLCILLGCDYLEPIR
GVGPKSALKLIREYGSLGKIIAHLREKEADKKAAAQSADEAEDEPAPTSDAEPAEDEPKK
KPKKGKGKGAGGIKVPEDWPWEEAKKLFENPDVVPADQLELEWNNPDVDGLVQFLVQEKG
FNEERVRKGAEKLQKFLNTKQQGRLDGFFSVKPKDKPAPATKSDSKTKGTKRKNDGKAEA
ASGKKAKRK
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgggtatcaaagggcttacagggctcatctcacagcatgcaccagcagcaatcagagaa
catgaaataaaaacactctttggccgcaaagtggccatagacgcatccatgtcaatatac
cagtttctcatcgccgtccgccagaaggatggtgaaatgctctcaaacgatgccggcgag
actacgagccatcttatgggatttttctatcgcacaatacgcatcgtcgagaacggtatc
aaacccgcatatgtctttgatggaaaaccgcccgatttgaaaaagggagtgctttcgaaa
cgatttgagcgacgcgaagaggcaaaagaggaaggtgaagaagcaaaagagacgggaacg
gtggaagaggtcgataaactatcaagacgaacagtgaaggtgactaaagagcataatgca
gaatgcatcaggctcctcaagctcatgggcatccctgtagtagtggcaccctctgaagca
gaagcgcaatgcgctgagcttgctcgtggtggaaaggtgtatgcggccggttcggaggat
atggatactttgactttcaacgcccccatcctctatcgacatctgacgttttcagaggcc
aaaaaacagccaattagtgaaataaacctcgaagtcgctttgaagggcctggaaatgaac
atgagccaattcatcgatttgtgtatacttcttggttgtgactacctagaaccaatcagg
ggcgtgggccccaagtctgctctcaaactcattcgagaatacggaagcctaggcaagatc
atcgctcatctaagagaaaaggaagcggataagaaagcagcagcgcagtcagcagacgag
gccgaggatgaacctgctcccacatcagatgctgaaccagcagaagacgaacctaagaag
aaacctaagaaaggtaaaggcaagggagcgggagggatcaaggtgccagaggattggcca
tgggaagaagcgaaaaagctgttcgagaaccccgatgtggttcctgcagatcaattagag
ctcgaatggaataatcccgatgttgatggcctcgttcaattcctcgtgcaggaaaagggg
ttcaatgaagaaagagttcgtaaaggtgccgagaaactgcaaaagtttttgaacaccaaa
cagcaaggtcgacttgatggtttcttttctgtcaagcccaaagacaagcccgcaccagcg
acaaagtctgattcgaaaacgaaaggaacaaagcggaagaatgatggcaaagctgaggct
gcctcgggaaaaaaggcgaaacggaaataa
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