KEGG   Agaricus bisporus var. bisporus H97: AGABI2DRAFT194810
Entry
AGABI2DRAFT194810 CDS       T03140                                 
Symbol
AGABI2DRAFT_194810
Name
(RefSeq) hypothetical protein
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
abv  Agaricus bisporus var. bisporus H97
Pathway
abv03020  RNA polymerase
abv03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:abv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    AGABI2DRAFT194810 (AGABI2DRAFT_194810)
  09124 Replication and repair
   03420 Nucleotide excision repair
    AGABI2DRAFT194810 (AGABI2DRAFT_194810)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:abv03021]
    AGABI2DRAFT194810 (AGABI2DRAFT_194810)
   03400 DNA repair and recombination proteins [BR:abv03400]
    AGABI2DRAFT194810 (AGABI2DRAFT_194810)
Transcription machinery [BR:abv03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     AGABI2DRAFT194810 (AGABI2DRAFT_194810)
DNA repair and recombination proteins [BR:abv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      AGABI2DRAFT194810 (AGABI2DRAFT_194810)
SSDB
Motif
Pfam: Zn_ribbon_RPB9 Zn_ribbon_TFIIS Zn_ribbon_PaaD Zn_ribbon_InsA RecR_ZnF C1_1 zf-C2H2 Zn_ribbon_ISL3
Other DBs
NCBI-GeneID: 18083001
NCBI-ProteinID: XP_006455154
JGI: Agabi_varbisH97_2_194810
LinkDB
Position
Unknown
AA seq 125 aa
MASLHFCSECNNLLYPKADQQRRIMVYACRICTYDEIGENKCVYKNDLLTVTKEQVGITT
DLGTDPTLAHSNIACPRCGNDDAVLYQDQSKRKETRMILFFVCTKCDHPFSDPSLDNQPE
TEETQ
NT seq 378 nt   +upstreamnt  +downstreamnt
atggcttcccttcacttttgttcagaatgtaacaacctcctctatcctaaagccgaccag
cagagaagaatcatggtttatgcgtgtcgtatctgcacttatgacgagatcggggaaaat
aaatgtgtgtacaagaatgatcttctaactgtcacaaaagaacaagttggtatcacaaca
gacctcggcacggacccaaccctcgcacattctaatatcgcctgtccgcgttgcgggaac
gacgacgccgttctatatcaagatcagtcaaaacggaaggagacaagaatgatattattc
tttgtctgtacgaagtgtgatcatccttttagtgatccttcgttagataatcaaccagag
acggaggagacgcagtag

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