Agaricus bisporus var. bisporus H97: AGABI2DRAFT195739
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Entry
AGABI2DRAFT195739 CDS
T03140
Symbol
AGABI2DRAFT_195739
Name
(RefSeq) hypothetical protein
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
abv
Agaricus bisporus var. bisporus H97
Pathway
abv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
AGABI2DRAFT195739 (AGABI2DRAFT_195739)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abv03019
]
AGABI2DRAFT195739 (AGABI2DRAFT_195739)
03036 Chromosome and associated proteins [BR:
abv03036
]
AGABI2DRAFT195739 (AGABI2DRAFT_195739)
Messenger RNA biogenesis [BR:
abv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
AGABI2DRAFT195739 (AGABI2DRAFT_195739)
Chromosome and associated proteins [BR:
abv03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
AGABI2DRAFT195739 (AGABI2DRAFT_195739)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin2
Nucleoporin_FG
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
18083339
NCBI-ProteinID:
XP_006456733
JGI:
Agabi_varbisH97_2_195739
LinkDB
All DBs
Position
Unknown
AA seq
965 aa
AA seq
DB search
MFQSSWGNQGQQQQQNPPSAFGQPNAFGNNAGTSTFGSTSFGQQQQPQQQQQPQVNPMFG
NLSAPASTAAPSGGFGAFANSGTGAFGQNKPSQGFSAFSGGTGAFGGTSNNTFGQASNPP
NTGTSIFGQPSSSNTGTGFGSTNAFGATKPTTSVFGSTSTTSPVNNGTGASPYAPFTEKD
PSTTSMLHYQTITCTPSYRNFSMEELRLQDYAQNRKTASSSTFGTTSAFGSTQPTSTGVF
GAQPNQPTSTSVFGGGTTNTSGFGAFGQQSNQPSTTQPGTGIFGGGSTFGSQPQQQQQQQ
PQPQQQQQPQQPQQQQQQQPGAFGAFGQQPQQQQQSGGIFGGSSAFGNTANKPGFGSTGA
FGTTPATGTGIFGGGSTGTNTFGQTPQPQQQQPSIFGNTQPNSQNAFGTLGNAQAKPSIF
GNTPTGTTGTGFGIFGNQNQPGQQTQQPTQQSSLFGGGGGGGGIFGNTATNQQAQQGTTQ
PSTSIFGATQPATSGTNIFGNTGGGLFGSNTNQQQQQPGIQQTTQTGGFGNLFGSKPASA
TPSLFSNVTTNTQPQASIFGKPPSNPQQSSLFGPKPMAPGLDTTGSGQSGLFGSMLGAPG
NTFGASSAPQPSLTASIADPIGNDLPIFSMLPPGPRSLDFDPSQQKKRHGFFVDSSTPPP
PLPRQLVYAPLHKGFGPLTPGSINGLTSISVPSFTSGKPGVLAVNGSVGPDDFLARSSSP
ALGSGSRPSVKIIFDKKVETAEIFVKSGSPGLSRGGKVTFSPALSVAAREKDAAALHKPA
APLPESPTPALKHPARNSSKFTAEPRNTGVETTGDATLQEGDYYIKPDLATLKKASYDEL
SSFEGLVVGRVGYGEIHFLESVDLTGLAKLGALLGEVIRFDDKECSVYPDSEEVDKPSPG
SGLNVKARLILERCWATDKATREPIKDSSHPTAVKHLKRLKNMRDTHFEGFDMDSGKWTF
TVDHF
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgttccaatcctcctggggtaatcagggtcagcaacaacagcaaaacccaccgagtgcg
tttgggcagcccaacgctttcgggaacaatgcgggcaccagcacttttgggtctactagc
ttcgggcagcaacagcagccgcagcagcagcagcaacctcaggtgaatcccatgttcgga
aacctttctgctcccgcttctacggcggcgccgtccggcggttttggcgcgtttgccaat
tccggtaccggtgctttcggtcagaataagccatcgcagggttttagcgcgttctctggg
ggcacaggcgcgttcgggggtacttcaaataacacatttggccaagctagcaatcccccc
aacacagggacaagcattttcggtcaaccgtcctcttcgaacacaggcacaggatttggg
agtacaaatgcttttggtgcaactaagcctacaacttctgtgtttggttctacatcgaca
acatcccccgtcaacaatgggactggagcgtcgccttacgcaccatttactgagaaagat
ccgagcacaacctctatgttacattaccaaacgataacgtgcactcctagttatcgcaat
ttttcaatggaagaactacgattgcaagactatgctcaaaatcgcaagactgcttcatca
agtacattcggaacaacgtccgcgttcgggagtacacaacccacaagcacaggtgtcttc
ggtgcgcaacccaatcaacctacatcaactagtgtctttggtggaggaaccacgaacacc
agtgggtttggtgcatttgggcagcaatccaatcagccaagtacaacgcaaccaggaact
ggaatttttggtggtggctcgacgttcggttctcagccacagcagcagcagcagcagcaa
ccacagccgcagcaacaacagcaaccgcaacagccacaacaacaacaacagcaacaaccc
ggcgctttcggtgctttcgggcagcagccacaacaacaacaacagagcggtggaattttt
ggcggcagctcggcttttggaaacactgcgaacaaaccaggcttcggctctacaggcgcg
ttcggaaccactcccgccaccggcacgggtatatttggcggtggaagtactggaaccaat
accttcggtcagactcctcagccgcaacaacagcaacccagtattttcgggaacacacag
cccaactctcaaaatgcattcggtacactcggaaacgcacaagctaagccatcaattttt
ggcaacacacccactgggaccactgggacaggtttcggtatcttcggtaatcagaatcaa
ccaggccaacaaacgcaacaaccaactcaacagtcctctctctttggaggcggtggcggt
ggcggtggcatttttggaaatacggccacaaaccaacaagcgcaacaaggcactactcag
ccatcaacttcgatatttggggctactcagccagctaccagtggcactaatatttttgga
aatactggtggtggccttttcggaagtaataccaaccagcaacagcaacaacctggaata
caacaaaccacgcaaacaggcgggtttggtaatctgttcggttctaaacccgccagcgca
acaccctcgttgttctctaatgtgacaacgaatacccaaccacaggcgagtatcttcggt
aaacctccatcgaatcctcaacagtcaagtctatttggtccaaaacccatggctcccggc
cttgacaccactggttccggtcagtccggactatttggctcaatgctaggggcccctggg
aacacatttggtgcatccagtgctcctcaaccatcccttaccgcctcaattgccgacccg
attggtaacgaccttcccatattttcgatgcttcctcccgggcctcgttccttggacttc
gacccgtcgcaacaaaagaagagacacggtttcttcgtagactcctccactcctccccct
ccacttcctcgccagttggtatatgctccattacacaaaggttttggaccactgacgcct
ggttccataaatggcctcacatcgattagtgtgccgagttttacttctgggaagccggga
gtcctagcagtgaatggttctgtgggaccagacgattttttggcccgcagctccagtcct
gcgcttggaagtgggtctcgcccgagtgtcaagatcatctttgacaagaaagtcgaaact
gcagaaatatttgtgaaatcggggagtccaggtctatcgcgtggaggaaaagtcacattc
agccccgctctcagtgtggctgctcgagaaaaggatgctgcagcattgcataagcctgcc
gcaccactacctgaatcccctacaccggccttgaaacatccagcccgcaactccagcaaa
tttactgcagaacctcgtaatacgggcgttgaaactactggtgacgcaacactgcaagaa
ggcgactactatattaagcctgaccttgccactttgaagaaagcgagctatgatgaactg
tcgtcttttgaaggactggttgttggtcgagttggatatggagaaatccacttcctcgaa
tcagtggacttgacaggccttgctaagcttggcgctctacttggagaagtcatccgattt
gacgacaaagaatgcagtgtgtaccctgatagtgaggaggtggacaaaccatctccgggt
tctgggctcaatgtgaaagcgagactgattctcgaacgctgttgggctactgacaaggcg
actcgcgagccaatcaaggattcttcccacccgactgctgtcaaacacttgaagcgcctc
aagaatatgagggatacacattttgagggcttcgacatggacagtggaaaatggacattc
acagtggatcatttctaa
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integrated database retrieval system