KEGG   Agaricus bisporus var. bisporus H97: AGABI2DRAFT195859
Entry
AGABI2DRAFT195859 CDS       T03140                                 
Symbol
AGABI2DRAFT_195859
Name
(RefSeq) hypothetical protein
  KO
K12602  WD repeat-containing protein 61
Organism
abv  Agaricus bisporus var. bisporus H97
Pathway
abv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:abv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AGABI2DRAFT195859 (AGABI2DRAFT_195859)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:abv03019]
    AGABI2DRAFT195859 (AGABI2DRAFT_195859)
Messenger RNA biogenesis [BR:abv03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     AGABI2DRAFT195859 (AGABI2DRAFT_195859)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_2nd EIF3I Beta-prop_TEP1_2nd WD40_Gbeta WDR55 ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Tricorn_2nd Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_WDR41 Beta-prop_Aladin Beta-prop_RIG_2nd WD40_RFWD3 NBCH_WD40 Beta-prop_WDR19_1st Beta-prop_EML Beta-prop_SPT8 Beta-prop_WDR75_1st Beta-prop_WDR11_2nd WDR90_beta-prop_4th Beta-prop_NUP159_NUP214 Beta-prop_DCAF12 Beta-prop_TEP1_C Tricorn_N Beta-prop_NOL10_N Beta-prop_RIG_1st Beta-prop_HPS5 Beta-prop_IFT122_1st Beta-prop_ELP1_1st
Other DBs
NCBI-GeneID: 18083372
NCBI-ProteinID: XP_006456890
JGI: Agabi_varbisH97_2_195859
LinkDB
Position
Unknown
AA seq 320 aa
MSLVFLNSHQSAERHDDAIWGAAWTSADTAVSVSADGSIRQWSSVSGQRHPPNGTPPAPH
TLALISLSVSPDGKRALYNSLEGHTWLLDLESGDIIGSHESYMGSSGDAEPSWSISLNPS
GSTYASSNASGNVTIHSADPSNFGERLSSIASGRVKFGMNCRHSPDGRKIALALETGQIF
VFDLEASSLLTTFTSHAMAVRSLSWSADSSLLMSASEDRRLVLHDIRSAPGNTIASFTGH
TAWALSVDIAPEGTLALSGSADKTVKVWDIGARSAVSTIQDTGEVWSVSWRPKPSALGIP
RAFLTGGEDGYVRWWKAGGT
NT seq 963 nt   +upstreamnt  +downstreamnt
atgagtctagtgtttttgaattcacatcagtctgcagaacgccacgacgacgcgatctgg
ggtgctgcctggacatctgcggataccgctgtctctgtatccgcagacggctcgatacga
caatggagctctgtttctggccagcgtcaccctccaaatggcactcctcctgccccacat
acacttgctctcatttccctgtctgtgtctcctgatggaaaacgcgccctatacaatagc
ctagagggtcacacatggctcttggatctcgaatcaggagatataattggctcgcatgaa
agttatatggggtctagtggggatgctgaaccctcttggtccatttcgctcaacccctca
ggaagcacatacgcctcatcaaatgcttcaggaaatgtcacaatacattctgcagatcct
agtaattttggcgagagactttcctctattgcctccggtcgcgtgaaattcggaatgaat
tgtcgtcattctccagatggtcgtaaaattgcgctcgcacttgaaacgggccagattttt
gtcttcgatcttgaagcgagctcactgttgaccacgttcacgtctcatgcaatggctgtt
cgatcactctcatggtcagctgattccagcctccttatgagtgcatcagaggacagaaga
ctcgttcttcacgatattcgcagtgcgccgggaaacacaatcgcttctttcaccggacat
actgcttgggctttaagcgttgacatcgccccggagggtactcttgcactttccggctcg
gcggataaaaccgttaaagtgtgggatataggagcgagaagtgctgtgtctacgatccag
gatactggcgaggtttggtctgtatcatggaggcccaaaccttccgcgttgggaattcca
agagcattccttactggtggtgaggatggatatgtccgatggtggaaggcaggtggtact
tga

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