KEGG   Agaricus bisporus var. bisporus H97: AGABI2DRAFT196012
Entry
AGABI2DRAFT196012 CDS       T03140                                 
Symbol
AGABI2DRAFT_196012
Name
(RefSeq) mago nashi
  KO
K12877  protein mago nashi
Organism
abv  Agaricus bisporus var. bisporus H97
Pathway
abv03013  Nucleocytoplasmic transport
abv03015  mRNA surveillance pathway
abv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:abv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AGABI2DRAFT196012 (AGABI2DRAFT_196012)
  09122 Translation
   03013 Nucleocytoplasmic transport
    AGABI2DRAFT196012 (AGABI2DRAFT_196012)
   03015 mRNA surveillance pathway
    AGABI2DRAFT196012 (AGABI2DRAFT_196012)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:abv03019]
    AGABI2DRAFT196012 (AGABI2DRAFT_196012)
   03041 Spliceosome [BR:abv03041]
    AGABI2DRAFT196012 (AGABI2DRAFT_196012)
Messenger RNA biogenesis [BR:abv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     AGABI2DRAFT196012 (AGABI2DRAFT_196012)
Spliceosome [BR:abv03041]
 Complex C
  Other components
   EJC/TREX
    AGABI2DRAFT196012 (AGABI2DRAFT_196012)
SSDB
Motif
Pfam: Mago_nashi
Other DBs
NCBI-GeneID: 18083421
NCBI-ProteinID: XP_006457171
JGI: Agabi_varbisH97_2_196012
LinkDB
Position
Unknown
AA seq 149 aa
MAPSDNDPFYLRYYTGHSGKHGHEFLEFEYSHGRLRYANNSNYRNDSLIRKEMWIGPLVV
KELKRIIESSEITKEDDTNWPKKNIVGKQELEIRVGNDHICFETAKIGSLVDIQDSEDPD
GLRVFYYLVQDLKCLIFSLISLHFKIKPI
NT seq 450 nt   +upstreamnt  +downstreamnt
atggctcccagcgacaacgatccattctacctcagatactacactggccactcgggaaaa
catggccacgaattcttagagtttgagtactctcatggtcgtcttcgttatgcaaacaac
tcgaattatcgcaacgacagtcttatccgtaaagaaatgtggatcggtcctctcgtcgta
aaagaactcaagcgcatcattgaatcgagtgaaatcacaaaggaagacgatacaaactgg
ccaaagaagaacatcgttggaaagcaagaactcgaaattcgtgttggcaacgatcatatt
tgtttcgagactgccaagatcggttctttagttgacattcaggatagcgaagatcccgat
ggccttcgcgtcttctactaccttgttcaggatctcaagtgtttgattttctcgcttatt
tccctccacttcaaaatcaaacccatatag

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