KEGG   Agaricus bisporus var. bisporus H97: AGABI2DRAFT200125
Entry
AGABI2DRAFT200125 CDS       T03140                                 
Symbol
AGABI2DRAFT_200125
Name
(RefSeq) hypothetical protein
  KO
K10755  replication factor C subunit 2/4
Organism
abv  Agaricus bisporus var. bisporus H97
Pathway
abv03030  DNA replication
abv03410  Base excision repair
abv03420  Nucleotide excision repair
abv03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:abv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AGABI2DRAFT200125 (AGABI2DRAFT_200125)
   03410 Base excision repair
    AGABI2DRAFT200125 (AGABI2DRAFT_200125)
   03420 Nucleotide excision repair
    AGABI2DRAFT200125 (AGABI2DRAFT_200125)
   03430 Mismatch repair
    AGABI2DRAFT200125 (AGABI2DRAFT_200125)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:abv03032]
    AGABI2DRAFT200125 (AGABI2DRAFT_200125)
   03036 Chromosome and associated proteins [BR:abv03036]
    AGABI2DRAFT200125 (AGABI2DRAFT_200125)
   03400 DNA repair and recombination proteins [BR:abv03400]
    AGABI2DRAFT200125 (AGABI2DRAFT_200125)
DNA replication proteins [BR:abv03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    AGABI2DRAFT200125 (AGABI2DRAFT_200125)
  DNA Replication Termination Factors
   ELG1-RFC complex
    AGABI2DRAFT200125 (AGABI2DRAFT_200125)
Chromosome and associated proteins [BR:abv03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    AGABI2DRAFT200125 (AGABI2DRAFT_200125)
DNA repair and recombination proteins [BR:abv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     AGABI2DRAFT200125 (AGABI2DRAFT_200125)
  Check point factors
   HRAD17(Rad24)-RFC complex
    AGABI2DRAFT200125 (AGABI2DRAFT_200125)
SSDB
Motif
Pfam: AAA Rep_fac_C RCF1-5-like_lid DNA_pol3_delta2 Rad17 AAA_22 AAA_assoc_2 AAA_11 AAA_2 RuvB_N AAA_16 AAA_30 SLFN-g3_helicase AAA_5 AAA_14 AAA_24 Mg_chelatase AAA_7 AAA_19 AAA_28 ResIII DUF815 bpMoxR nSTAND3 RNA_helicase AAA_23 Gp44_lid AAA_25
Other DBs
NCBI-GeneID: 18083776
NCBI-ProteinID: XP_006458476
JGI: Agabi_varbisH97_2_200125
LinkDB
Position
Unknown
AA seq 349 aa
MAASFFTSKAAQKASVKHTVDAELQPWVEKYRPKTIEDVSAQEHTIAVLRKTLTSTNLPH
MLFYGPPGTGKTSTILALARQLFGPDNFKNRVLELNASDERGISIVREKIKNFARQTPRA
QAVASDGKTYPCPPYKIIILDEADSMTQDAQGALRRIMETYARITRFCLVCNYVTRIIEP
LASRCSKFRFTPLDSESATSRLTYIAKEEQIDVDTSVIDALITVSNGDLRRAITYLQSAS
RLSSSSESPENLRPYDIQEIAGVVPDTFKKSNFTAIQKNVKAIIREGYSATQILIQLHDI
VALHPVLNSKQKSECALVFAEADKALCDGSDEELWVLEIATRVNKAVTS
NT seq 1050 nt   +upstreamnt  +downstreamnt
atggccgccagtttcttcacctcaaaagcagcccaaaaggcttctgttaaacataccgtg
gatgcagaactacaaccttgggtcgagaagtatcgaccaaaaacgatcgaggatgtgtcc
gctcaggaacataccatcgcagtgctacgcaaaacactgacttcaacgaatctccctcat
atgcttttctatggccctcctggaacgggcaagacttcgaccatcttagccttggcgaga
caactcttcggacccgacaatttcaaaaacagggtactcgaactaaatgcttcagacgaa
cgaggtatcagcatcgttcgagagaaaatcaaaaactttgcacgtcaaactcctcgagct
caagccgtcgcttcagatggcaaaacatatccatgccctccctacaagattattattctc
gatgaagcagattcaatgacacaagacgctcaaggtgcacttcggcggataatggaaact
tatgctcgcataacgcgtttctgtcttgtatgcaactacgttacaaggatcatagaacct
ctcgcatcccgatgctccaaatttcgtttcacgcctcttgactctgaatcagctacaagt
cgtttaacatatatcgccaaagaagaacagatagacgtcgatacctctgtgatcgacgct
ctcatcactgtttcaaatggtgacctccgtcgtgccataacctatctccaatctgcttcc
cgtctctcttcctcttccgaaagcccagaaaatctccgaccttatgacatccaagaaatt
gcaggtgttgtacctgataccttcaagaagtcaaatttcactgctattcagaaaaatgtc
aaggcaatcatccgagaaggatattctgcaacacagattcttatacaactccatgacatc
gtagcgcttcatcctgtattgaatagcaaacaaaagtcggagtgtgccctggtattcgca
gaagccgacaaggccctctgcgatggttctgacgaggaactttgggtgcttgagattgct
actcgagtaaataaggctgtcacctcatag

DBGET integrated database retrieval system