Agaricus bisporus var. bisporus H97: AGABI2DRAFT202338
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Entry
AGABI2DRAFT202338 CDS
T03140
Symbol
AGABI2DRAFT_202338
Name
(RefSeq) hypothetical protein
KO
K12385
Niemann-Pick C1 protein
Organism
abv
Agaricus bisporus var. bisporus H97
Pathway
abv04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
AGABI2DRAFT202338 (AGABI2DRAFT_202338)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
AGABI2DRAFT202338 (AGABI2DRAFT_202338)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
abv02000
]
AGABI2DRAFT202338 (AGABI2DRAFT_202338)
Transporters [BR:
abv02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
AGABI2DRAFT202338 (AGABI2DRAFT_202338)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPC1_N
Sterol-sensing
NPC1_MLD
Patched
Folate_rec
ACR_tran
TRA2_N
DUF4079
Motif
Other DBs
NCBI-GeneID:
18083944
NCBI-ProteinID:
XP_006459897
JGI:
Agabi_varbisH97_2_202338
LinkDB
All DBs
Position
Unknown
AA seq
1381 aa
AA seq
DB search
MNHCALRSSCGTNVFKPLPCPYEGPPQEPEDRALLTEVCGPEFAAGPVCCSSDQVETLKA
NFVQVEAFLASCPACRNNFRSFFCAFTCSPHQGEFVNVTSTQEGSNGRTAVKSADFFVTE
QFGKGFYDSCKDVQFGVTNGYAMDFIGGGAKDYHAFFKFLGDVKPLGSPFQINFPTTSTP
DITPLDPPPRNCHDSELTSRCTCIDCPDMCPALPPAPLPNAGPTCLVGPLSCLSFILSVT
YTVAVLGFLTGYAISAFRRHRREKSYERVALSADAASPRTRSHGLVGAASLSHYIDEDSS
GAPSENRHLGRGVSLLDPMETVQPRQDRINNVIRRGFYHLGLFASNHPWLMFSVVFLVIG
LLNIGWDRFAVETDPVRLWVAPDSESRLQKEYFDQHFGPFYRTEQIFVTAAVPRSESNPN
DTTQTTSITIGEKGPVLSWDRLKFWFDVESQIRNLVSPNGLTLDDVCFKPGGPRGACVTQ
SIAAWYGNDLEDYDPDTWADHLEECAWNPVDCLPDFQQPLEPQFVLGGVPLDSKGSKQYL
EAEAFVVTYVVSDSLDQHKQAMIMDWETTLRKYLTGLGQRAEAEAGLSVVFSTGVSLEEE
LNKSTNTDVRIVVLSYVAMFLYVSLTLGSGSTTKDEDGVISSLFRWIRNFPKLFKRSGSA
STISIDSRDVPTLFPRFPRSLFVGSKVLLGLFSIFLVLVSISTAVGFFSLLGVKVTLIIA
EVIPFLVLAVGVDNVFILVHELDRQNTLHGPNAAPTYITALSPTNSHRFNFESTQPDVDD
TSLPLYLSAEERVTRTLAKMGPSILLSTITETLAFALGALVPMPAVRNFALYAAGSVLIN
AILQVTVFIGALLLDLKRVESNRVDCFPCIRLSSRIALPETSASSSGLGRIARFIRRYYA
PFLMNSVTKACVVIIFVGGFVASVISVQHIQIGLDQRLALPADSYLVPYFDSLDAYLDVG
PPVYFVAKGVDVAERTGQQALCGRFTTCPDFSIANRLEAERKRPETSFINQPTASWIDNF
LSWLNPVNDECCRVRKNDPSVFCTARTPSRACRPCYQDHEPAWNITMTGLPQGEEFMRYL
KQWLVSPTTAECSLAGETAFGDAISFTADSSHIEASHFRTYHNPLKSQDDFINAFAAAHR
IADEISEEAGVEVFPYSLFYVFFDQYAHIVGITQEVLGLGLASVLIVTGLLLGSWHTAII
VTGVVAMTVLSVMAVMPLWGINLNAISLVNLVISLGIAVEFCAHIARAFMSVSSSSSVTV
VGNTVSHGHGVEQKERDERVHIALVDVGPSVLSGITFTKLIGMSVLALTRSKLLEIYYFR
MWLTLIVSGALHGLVLLPVVLSLAGGRGFPPGTDEEWMRDATRIEYEYPTFNADDDSIRS
D
NT seq
4146 nt
NT seq
+upstream
nt +downstream
nt
atgaaccactgtgctctgcgctcctcatgcggcaccaacgtcttcaagccgctgccctgt
ccctatgaaggcccaccgcaagagcctgaagaccgtgccctgcttacagaggtttgcggg
ccagaattcgccgccggtccagtatgctgttcctctgaccaagtggagactctcaaggcc
aactttgtccaagtagaagccttcctagcgtcgtgtccggcgtgcaggaacaatttcaga
tcattcttttgtgcctttacatgctccccacaccagggcgaatttgtcaatgtcacctct
acacaagagggttccaatggccggaccgctgtcaagtctgccgacttctttgtcactgaa
cagtttggcaagggcttctatgacagctgcaaggacgtccaatttggtgtgaccaacggg
tatgctatggatttcattgggggaggtgccaaggattatcatgcgttcttcaaattcctg
ggtgatgtgaaaccacttggaagtccattccagatcaacttcccaactacctcgactccc
gacatcacaccccttgacccgcctccgcgaaattgtcatgacagcgaactgacaagtcgt
tgcacatgcatagactgccccgacatgtgtcccgccttaccacccgctcctttacccaac
gctgggcccacatgtctcgtcggtccattatcttgcctatcattcatcctttctgtcacc
tacaccgtcgctgtcctaggtttcctaacaggctatgctatctctgccttccgcagacat
cgccgagagaaatcatacgaacgtgtcgcactctcagcggatgctgcctccccgcgaaca
cgcagtcatggacttgttggcgctgcttctctatctcactatatcgatgaagactcgtcg
ggtgccccgtcagaaaaccggcatcttggccgcggtgtatcgttgctagaccctatggaa
acagttcagcctcgccaggaccgtatcaacaatgtgattcggagaggattctatcacttg
ggtctgttcgcctctaatcatccgtggctcatgttttccgtcgtctttcttgttattggc
ctcctgaacatcggttgggatagattcgcagttgaaacggaccctgttaggttgtgggtc
gctccagattccgaaagcagacttcagaaagaatattttgaccagcactttggtccattc
tatcgtaccgaacaaatctttgtgaccgctgcagtacctcgatcagaatctaatccaaat
gatactacacaaactacatccatcaccataggcgagaagggtcctgttttgtcctgggac
cgcctcaaattctggtttgacgtcgagtcacaaattcgtaatcttgtctcgcccaatggt
ttaacactagatgatgtttgtttcaagcctggtggccctcgaggtgcttgtgtcacccag
tccattgcggcatggtacggtaatgacctagaggattatgacccggatacttgggctgat
cacctagaggaatgtgcttggaatcccgtcgactgccttcccgatttccagcaacctctt
gagccacaatttgttttgggaggtgttcctcttgattccaagggttcgaagcagtacttg
gaggctgaagctttcgtcgtgacatacgtggtatcagattcacttgaccagcacaaacaa
gctatgattatggattgggaaacgactctgcggaaatatctcactggtctcgggcagcgt
gccgaagcagaggccggcttgtcagtcgtattttctactggcgtgtcccttgaagaggaa
ctaaacaagagtacgaataccgatgttcgtatcgttgtattgtcatatgtggcaatgttc
ctctatgtctcgctcactcttggtagtggatctactactaaggatgaggatggagtcata
tcttcactcttccggtggattcgcaattttccaaaacttttcaagcgttccggttccgcc
tctaccatttccattgattctcgcgatgttcccaccctatttccccgctttccccgcagt
ctcttcgttggttcgaaggtcttacttggtttgttcagcatctttctagtacttgtctcc
atttctaccgcagtcggattcttctccttgctcggagtgaaagtgactcttatcattgcc
gaggttatcccttttcttgtcctcgcagttggggtcgacaacgtcttcatccttgtccac
gagcttgatcgtcaaaacacgcttcatggaccaaatgcggcaccaacgtacatcacagct
ctatcacccacgaattcccaccgatttaatttcgaatcgacgcagcctgacgtagatgat
acgtcccttccgttgtacctgagtgcggaagagagggttactcggactttggctaagatg
ggaccttcaatcttattgagtaccatcacagagacccttgcttttgctctgggtgctctt
gttcctatgcctgccgttcgcaattttgcactgtatgcggctggaagtgtattgataaat
gctattttgcaagtgacggtgttcatcggcgctttactcttggatctcaagcgcgtagag
agtaatcgtgtggactgtttcccttgcattcgtttgtcttccagaatagcattgccagag
acttctgctagttctagcggtttgggccggatcgcaagattcatccgccgctactatgct
cctttcctcatgaattccgtcaccaaagcttgtgttgtaatcatctttgtgggaggcttt
gtggcatctgtaatttctgttcagcatatccagattggccttgatcaacgtctggctcta
cctgcagactcgtacctcgttccctactttgactccctggatgcctatctagatgttggt
cccccggtttattttgttgcgaagggtgtcgatgtagctgaacgaactggccaacaagcg
ctctgtgggcgcttcacaacgtgtcctgacttttctattgcaaaccgattagaagcggag
cgcaagaggcccgaaacttctttcattaaccaacccactgcctcctggattgacaacttc
cttagttggttgaatcctgttaatgatgaatgttgtcgtgtgcgcaagaatgatccttct
gtgttttgcactgctcgcactccttcaagagcctgcagaccttgttatcaggatcacgaa
ccagcttggaatatcacgatgacagggcttcctcagggagaggaattcatgcgatatctc
aaacagtggctggtttcaccaacgacggcagagtgttcgctcgctggagagactgctttt
ggggatgctatatctttcacagctgattcctcacatatcgaagcttcccacttccgcacg
taccataatccactcaagtctcaagatgatttcatcaatgcattcgcggcggctcatcgc
atagcagacgaaatatccgaagaggcgggtgttgaagtcttcccttattctctcttttac
gtctttttcgaccaatatgcgcatattgtgggaatcacacaagaagtgcttggacttgga
ttggcttctgtgcttattgtcactgggcttcttctagggtcatggcacaccgcgatcatt
gttacgggagtggttgcaatgaccgttctgagtgtgatggcggtgatgccgctttgggga
atcaatctgaatgcgattagtttggtgaatttggtgatttcgttggggattgctgttgag
ttttgtgcgcatattgcgagggcttttatgagtgtttcgagttcttcgtcggttactgtt
gtgggaaatacggtgtcgcatggacatggtgtggagcagaaggagagggatgagagggta
catatcgcattggtggatgttgggccatctgttttgtctggtataacgttcactaagctt
attggcatgtcagtccttgctctgacgcgctctaaacttctcgagatctattacttccgc
atgtggttgacactcatcgtttctggtgcccttcacggtttggtgttgctgcctgttgtc
cttagtcttgcaggagggcgcggttttcctcctgggacggacgaagagtggatgcgcgat
gcgactagaattgagtacgagtatccaacgttcaacgccgatgacgactccattcgtagc
gactaa
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