Agaricus bisporus var. bisporus H97: AGABI2DRAFT202619
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Entry
AGABI2DRAFT202619 CDS
T03140
Symbol
AGABI2DRAFT_202619
Name
(RefSeq) hypothetical protein
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
abv
Agaricus bisporus var. bisporus H97
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
abv03036
]
AGABI2DRAFT202619 (AGABI2DRAFT_202619)
Chromosome and associated proteins [BR:
abv03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
AGABI2DRAFT202619 (AGABI2DRAFT_202619)
microRNA pathway
RISC loading complex
AGABI2DRAFT202619 (AGABI2DRAFT_202619)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
Motif
Other DBs
NCBI-GeneID:
18083963
NCBI-ProteinID:
XP_006460022
JGI:
Agabi_varbisH97_2_202619
LinkDB
All DBs
Position
Unknown
AA seq
1179 aa
AA seq
DB search
MHLDDIQDPDIRQLKSTFNAKLLRVAEFECGPLVFGDLPTELEVAYTSTHVQETSLCQRV
REFNTTLSLDRHFRNANLVLYQLGPCAADLVWSNAFASPDWADDGLHIREGTAEAQVREL
VKHWSFELPNLDPTSRNMNVSHKFILLVQQLEAHQILGDNFRGIIFVQKRIVAQLLVALI
HISMPRLQFLRPISLTNYRVLSDSEAFVCDIFLTHVPVTYPLQERMTQQFVSGEYNLLIA
TKSFEDAGLPKAPVVILFDVFESQISRAYTRRCASVQGGYLIHMLEQGNSLHHYALSHSA
LDPEMIRWATTLENDYFNRAPPQPPQESNDPYNSDSEDDRDLEVIQDPITGHHIRKNQST
IAFHRYAARADAQTKCEDLFKFVSQKSTYSEWRCRINLAGTPVDGVSGPAAPTKALARKE
ACYIACLRLQHFGLLDSAFFFRTRARKVESHDETFDCPDPHSGSIHERPHIPLTPEFWKN
SILTSPSLRFLYPIVVSIPFPVSSVCEKAPICILTRAPLPPIPQFQLSHDGDALTLQSQR
YLPLSLDAGRLDLIHKFTIRFCRMIMNKPFEALSYKNLGYMFAPLRKAWKPPDDEEYDLS
EDIDWEMVSVVSENWAVPFGDLTQLRKEAEDALIQDRAVEFTNRYEILCIREDMTPTSVV
EGKVSGLLFRMWRPHNGRYFFRQGGKTLLEQCYSRRKNFEGLAHPNQPILEVMRMPAPTN
YLNPPISQLELPAKTTQFLIPECCRRLTVSASTLRMGYLLPSIIRRIDEFLLIKQLNAKN
LNHCVKDDLLIMATSSPLAGNDYNYERLELLGDALLKYLSTTYVFVQNLNGTEGELHTAR
QRFISNRQLCDIVSGWGLPGYIQLKPFNIKSWLPPGMTIDDRQKESTVGGGVVDDGHLDM
RPAQPNEDRIGASKRPKNKKRRLNKKTLSPIANKTVADVAEAIIGAAYISGGRDSALKAT
KALMIPFADVEEWADFGRKASAPRHDTGHAPEPSVMHFIETITGFRFQQPSLLRLTLTQN
SMEMKDHQRLEFLGDAVLDFLVVRYLYDKDEHASPGELSVMKSLMVSNSILAAICVWSGL
HRFVHVRQQQKQVVWDYEKALRGREAAETASTSKEAARVTYFWMDLDVPKVLSDVIESII
GAAYISDDFSQAGVEVIFDQMLLPFYQKFVFTKPDAASS
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgcatttggacgatatccaggatcctgatattcgtcagcttaagtccacctttaatgcc
aagctgcttcgtgttgccgaatttgaatgtggaccattggttttcggggacttacccact
gagctcgaggtagcctacacgtcaactcatgtacaggaaacatccttgtgtcagcgagtg
agggagtttaacacaacattatctcttgatcgtcactttcgcaatgctaatttggtttta
tatcaactcgggccatgcgctgctgacctcgtctggagtaacgcatttgcctcccccgat
tgggctgacgatggtcttcacattcgcgagggtacggctgaagctcaagttcgtgaactt
gtcaagcattggtccttcgaattaccgaaccttgatccgacttcccggaacatgaacgtc
agccacaaattcatcctccttgttcagcaattggaagcgcatcaaatccttggagacaac
ttccgcggcatcatatttgtgcaaaaacggattgtcgctcagctattggtcgctctgatt
catatctcaatgccacgactgcaattcctacgtcctatatccttgacaaattaccgcgtc
ttgtcagattctgaggccttcgtatgtgacatttttcttacccatgtaccagttacgtat
cctttgcaggaacgaatgacccagcaatttgtctcaggagagtataatcttttgattgcg
acaaaatcgtttgaggatgctggcctccccaaagctcccgtcgttatcttatttgatgtg
ttcgagagccaaatatcacgcgcatacacacgtcgttgcgcttcagtccaaggggggtat
ctaattcatatgctagagcaaggtaatagcctccatcattatgcactatcccatagcgca
ttagatccggaaatgattcgatgggctaccaccttagagaacgactatttcaaccgtgcc
ccgccacagccgccacaagaaagtaacgacccgtataattcggatagtgaagatgatcga
gaccttgaggttatccaggatccaattaccggacatcacatacggaaaaatcaatccaca
atagccttccatcgttatgctgcacgagcagacgcgcaaacaaagtgcgaagacctcttt
aagtttgtctcacaaaaaagcacctacagcgaatggcgttgtaggatcaatcttgcgggc
actccagttgatggagtatcgggtccggcagctcctacgaaagctctggcccggaaggag
gcatgttacattgcgtgtctgcgcctgcaacattttggacttctggattcggcattcttc
tttcgcactcgcgccagaaaagtcgagtcgcatgatgagaccttcgactgtccggacccc
cactctggatccatacacgaaaggccacatatacctctcactcctgagttttggaagaac
tccatcttaacgtcaccttccctccgattcctttatccaatagttgtctctatacccttc
cccgtatcaagtgtctgcgaaaaggcgcccatttgtatccttactagagcgcccttacct
ccaatcccgcagttccagctttctcacgatggcgatgcattgacattacaatctcagaga
tacttgcccttatctctggacgctggacggctagatttgatccacaagtttaccatcaga
ttttgccgtatgatcatgaacaaaccttttgaagcattgtcgtataagaatttgggatat
atgtttgcaccccttagaaaagcctggaaacctcctgatgatgaagaatacgatctttca
gaagacattgactgggaaatggtttccgtggtatcggaaaactgggctgttccctttggc
gacttgacgcagttgagaaaggaggcagaagacgccttaatacaagatagggctgtggaa
tttaccaacaggtatgagatcctgtgtatcagagaagatatgactccaacgagtgtagtt
gaaggtaaagtaagtggtcttctgtttagaatgtggcgccctcacaatggacggtatttt
tttcgacagggcggaaagacgttgttagagcaatgctatagtcgtcgaaagaatttcgaa
ggactcgctcatccgaatcaacctattctagaggtgatgcgcatgcctgcacccaccaat
tatctcaaccctcctatatctcaacttgagcttcctgcgaagaccacgcaatttttgatc
cctgaatgttgccgcaggctgaccgtttcggcgagcactttgcgtatgggatatttactg
ccttctatcatacgcaggatcgatgaatttctcctaatcaagcagctcaacgcaaaaaat
ttgaaccactgcgttaaagatgatttgttgataatggccacctcctctccgttagccgga
aacgattacaattatgagcgactggaactcctcggagatgccttactcaagtatctctcc
accacatacgtatttgtccaaaacctgaatggtaccgaaggcgaacttcatacggccagg
cagagattcataagcaaccgacaactgtgcgacattgttagcggttggggcctacctggc
tacattcagctgaaaccattcaacatcaagtcctggcttcctcctggaatgaccatagac
gacagacaaaaagagtcgacagtgggcggaggagtagtggatgacggtcatctcgatatg
aggcccgcacagccaaacgaagaccgcataggtgcaagcaaacgacccaagaataagaag
agacgtctgaacaagaagaccttatcgccgatcgccaacaagacggtcgccgacgttgca
gaggcgatcataggtgcagcatacatttcaggtggacgcgactcagctttgaaggctacc
aaggcgttgatgataccattcgcggacgtagaagaatgggctgatttcggacgtaaggca
tctgctcctcgacacgatacaggtcatgcacctgaaccttctgtgatgcatttcatcgag
acaatcaccggatttaggtttcaacaaccctccctattgcgtctgacactgacacagaac
agcatggaaatgaaggaccaccaacgactcgagttcctcggagacgccgtcttggacttt
ttggtcgttcgatatctgtatgataaagatgagcatgcatcgccgggtgagcttagcgta
atgaagagcttaatggtgtcgaattccattcttgcggcaatttgcgtctggtctggacta
catagatttgtccacgtcaggcagcagcaaaagcaggtcgtctgggattacgagaaagca
ctccgtggcagagaagcggcagaaactgcctctaccagcaaagaagcagcaagagtcacg
tatttttggatggaccttgacgtgccaaaagtgctttcggacgttattgaatcaattatt
ggagccgcgtatatctcggatgacttctcccaggcgggtgtcgaagtcatctttgaccaa
atgttgctgccattttaccagaaatttgtttttacaaagccagatgcagcttcatcatag
DBGET
integrated database retrieval system
