Agaricus bisporus var. bisporus H97: AGABI2DRAFT203080
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Entry
AGABI2DRAFT203080 CDS
T03140
Symbol
AGABI2DRAFT_203080
Name
(RefSeq) hypothetical protein
KO
K18664
antiviral helicase SLH1 [EC:
5.6.2.6
]
Organism
abv
Agaricus bisporus var. bisporus H97
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abv03019
]
AGABI2DRAFT203080 (AGABI2DRAFT_203080)
Enzymes [BR:
abv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AGABI2DRAFT203080 (AGABI2DRAFT_203080)
Messenger RNA biogenesis [BR:
abv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
AGABI2DRAFT203080 (AGABI2DRAFT_203080)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
AAA_19
nSTAND3
AAA_30
Mg_chelatase
AAA_11
UvrD-helicase
DEXQc_Suv3
nSTAND1
Motif
Other DBs
NCBI-GeneID:
18083990
NCBI-ProteinID:
XP_006460219
JGI:
Agabi_varbisH97_2_203080
LinkDB
All DBs
Position
Unknown
AA seq
1443 aa
AA seq
DB search
MDLSSEAARKRMERQFQENAGKTLFSRPMYEEPEKLPHVYSSSGLAQHNMLSPTGQRYLL
PLGTERTYHEEYEEVIVPPAKPTPPKSTERMIPISELDPLARGCFPGYRSLNRIQSIVYS
TAYGTNENMLICAPTGAGKTDVAMLTILRVINQHRSQASRGEEIPSTICRGAFKIIYVAP
MKALAGEIVRKLGKRLRWLNIEVRELTGDMQMTKAEIAATQIIVTTPEKWDVVTRKPTGE
GELASSLKLLIIDEVHLLNDERGAVIETIVARTLRQVESSQSVIRVVGLSATLPNFLDVA
EFLSVSRYKGMFYFDSSFRPIPLEQHFIGVRGKPGSVTARRNLDRVTFEKVSDLVAQGHQ
VMVFVHARKETVKAAMELKEAAVAGGNIDDFSCQEHPQWELFRREISVSRNKEMKQLFDH
GFGIHHAGMLRSDRNLMERLFEARAIKVLCCTATLAWGVNLPAHAVIIKGTQVYDSSKGS
FVDLSVLDVLQVFGRAGRPGLETSGEGYICTGNDKLTHYLESVTSQNPIESQFHKGLFDA
LNAEISLGTVANLHEAVQWLGYTYLYVRMRKNPYHYGIPRDTLLEDPQLGAKRQELVKLA
INKLSDVKMVVQDHRTDTYTITELGRIAAKYYLRYTSIEIFNKEFRPRMSEADILAMLSM
STEFNQIQLRESEMKELEQLQERAPCDVKGGTDTSQGKVNILLQAYISQEMLEDFALVSD
MAYVAQNGGRIIRALLEIALSRKWANVSSVLVAMSKAIEKRLWPYEHPLRQFELKVETMY
KIQEWADEWTVQEILNLDAASLGELVHLNEPQGQAILKAAKHLPSLRIDYKLKPLGADVL
RISVRLTRMFTWNSRLHGVAEPFLVWIEDHEGLTILQLAHIIIRPTTENTLLDFIITIPD
GVSPPFVTIRVASDRWIGAEDEMQLPLAYLTMPLSSQSHTPLLPLPLLPSSIVGDSVLRT
LLSQQAPTFSAIQTQAYWTFLETRHHLLLSAPSGSGKSLMAKIVTLMTVLKNGDSWAMFV
TPQQSAANEIYADLRPLCSAVNVPLELVSSSKSSLRPRNRLIRIVSADRLLATLASSGLR
KSIPGLSLVVCDDLEQLSPTYEWALSLLRHATQCQPTRYIGLSNSLGDPADLADWLHVHP
TALLSFQPRDRDQSLQFNIQTFTIPHSPSLHKAMAKPAHSAIRSAPQGESAIVFVPSQGA
CRSIALNLLTRCMLEMESSRGYLPEKVPDEYIEGVCAQLNDTSLMDFISKGIGFFHSGIN
KHDRLLMLGLFVERAMRVLVVPHDSAMSLPVRAAVVVVMGTQYFSLPSTSSDSSDRQLQD
YSLAKIIRMQSRAVRHSEIGHFYLFCQVEAKDTLTRFLNDGLPLESELLGSPVLMEWIKA
QNLDWRRQKQDLVDVLSFSFLSRRIVTNPSYYDCPPEGKNPNLSRIVDRLLETAPQPEVQ
HGG
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atggacctctcatccgaagctgctcgtaagcggatggaaagacaattccaggagaatgca
ggaaaaacccttttttcacgacccatgtatgaggagccagaaaaacttccgcatgtttat
agctcttctggtcttgcacagcacaatatgttatcacccacagggcaaaggtatcttcta
cctctaggaacagaaagaacttatcacgaggaatatgaagaagtcatagtgccccccgcc
aaacccacccctcccaaatcaacagaacgtatgattcctatatcagagcttgaccccctg
gcaagaggatgctttccgggctatcgatctctgaatcgcatacaatctattgtctactct
acggcctacggtacaaatgaaaacatgttgatctgcgctcccactggtgctggcaaaaca
gatgtggcaatgctcacaattctgcgtgtcatcaatcagcatcgctcccaggcgtcccgc
ggagaggaaattccttcaacgatatgcaggggtgcctttaagatcatctatgttgcaccc
atgaaagctttagccggagaaatcgttagaaaattaggaaagcgtcttcgctggttaaat
attgaggtccgagaactaacaggtgatatgcaaatgaccaaagcagagatcgccgccaca
cagataatagtcacgacgccagagaaatgggatgtagtgaccaggaaacctacaggtgaa
ggggaacttgcatctagccttaagttactgatcatcgacgaagtacacctactcaacgat
gaacgaggcgctgtcatagaaaccattgttgcgagaacgcttagacaagtagaatcaagt
caatcggtcattcgggtggtgggtttaagcgcaaccctccctaatttcttggatgttgca
gaattcctgagtgtatctcggtataaaggaatgttttacttcgactcctcatttcggccc
atacctctggagcaacactttattggcgtcagaggcaaacccggaagtgttactgcccgc
aggaatctcgatcgggttacctttgaaaaggtttcagacttagtcgcacaaggccatcaa
gtcatggtgtttgtccatgcccgcaaagaaacggtcaaagctgccatggagctgaaggaa
gcagcagttgcaggagggaatatagacgacttcagctgccaagaacatccacagtgggag
ttatttcgacgagaaatcagcgtttctcgcaacaaagagatgaaacagctctttgaccat
ggattcggtatccatcatgcagggatgttgcggtcggataggaatctgatggagaggttg
ttcgaagctagagcaattaaagtcctatgttgcacggccactctcgcatggggtgtcaat
ctacctgcacacgctgttatcatcaaaggcacgcaggtttacgacagctcgaagggctcc
ttcgtagatttatctgtcttggacgtcttacaagtttttggcagagcgggaagacctggg
ctggagacaagtggagaaggctacatctgtacaggcaacgataagcttacgcactatctc
gaaagtgtcacctcgcagaaccccatagaatcccaattccacaagggtctgtttgatgca
ctcaatgcagaaatatctttagggactgtggcaaaccttcatgaagctgtccaatggctc
ggttacacatacctatatgtacggatgaggaagaacccataccactacggaattccaaga
gacactcttctagaggacccgcagctgggtgcaaaacgacaagaactggtaaagttagct
ataaacaagctttcggatgtcaagatggttgttcaggaccatagaaccgacacctacaca
atcacggagcttggaagaattgctgccaaatattaccttcgatatacatcaattgagatc
ttcaacaaggaattccgtcctagaatgtccgaagctgatatactagcgatgcttagtatg
agcactgagttcaatcagatacaactccgagaatctgaaatgaaggaactagaacaactg
caggaacgtgccccgtgtgacgttaaaggaggaactgatacaagccaaggcaaagtcaat
atcctccttcaggcgtacatttcacaggaaatgctggaagactttgctctggtctccgat
atggcctacgtggcacaaaacggtggccgtatcattcgagctctccttgagattgccctc
agtcgcaagtgggctaacgtatcaagtgtgcttgtggcaatgagtaaagctatcgagaaa
agactttggccatatgagcatccgctacggcaattcgagcttaaagttgagacgatgtat
aaaatacaagaatgggcggacgaatggaccgtccaggaaattctcaatctcgacgcggca
tctttaggggagctcgttcacctcaatgaacctcaaggacaagcgattctgaaagctgcg
aaacatcttccttcgctgcgcattgactataaattgaaacctcttggtgctgatgtgctc
cgtatctcagttcgtcttacgcgcatgttcacgtggaattcccgtttgcatggcgtcgca
gagccattcttggtttggatagaagaccacgaagggctaacgatactccagctcgcccat
atcattattcggcctacaaccgaaaacaccctactcgatttcattataactattccggat
ggcgtttctcctccctttgtgacgatccgtgttgcatctgaccgttggattggtgccgag
gacgaaatgcagcttccacttgcatacctgacaatgccgttgtcctctcaaagtcacacc
cctttgcttccacttccacttcttccttcctctatcgtcggggactctgttctcagaacg
ctcctttcacagcaagcacctacttttagtgctattcaaacacaggcgtactggactttc
ctagaaactcgccatcacttgttactgagcgcgcctagtgggagtggcaaatctttgatg
gcaaagattgttacattgatgacagtgctaaagaacggcgattcctgggcgatgttcgtt
acaccacagcaaagtgccgcgaatgagatatacgcagatcttcggcctctatgctctgcg
gtgaacgttccgcttgaactcgtatcatcctcaaaatcctcgctgcgcccaagaaataga
ctaatacgcatcgtttctgccgacagattgctggcaacattagcttcatcgggtctgcgg
aagagtatacctggtctaagtctcgttgtatgtgacgatctcgagcaacttagccccacc
tacgagtgggctttgtccttactccggcatgctactcaatgtcagccaaccagatatatt
ggactttccaattctcttggtgatcccgccgatcttgcagactggttgcatgttcatcca
acagcgctcctcagttttcaacctcgggaccgtgatcaaagcctccagtttaatatccaa
accttcacaattcctcactcaccttcgctacataaggctatggcaaaacctgctcattca
gctatcagaagtgctcctcaaggagaaagtgctatcgtatttgtgccatctcaaggagca
tgtcgctcgatcgctctcaacctccttacgcggtgtatgctagagatggaatcttcgcgg
gggtaccttccggagaaggtacctgacgaatatatcgagggtgtctgtgcgcaattgaac
gacacctcgttgatggactttatcagcaaaggcattggatttttccatagtggcatcaat
aaacacgatcgcttactcatgcttgggctctttgtggagagagcaatgcgtgtgttggtc
gtcccgcatgattcggcaatgtcgttacctgtacgtgctgcggtggtggtggtcatgggt
acgcagtattttagcctaccgagcacgtcgtccgattcttcggatcgtcagctgcaggat
tatagtctcgccaaaatcattcgaatgcagagcagagccgtgaggcattctgaaattggt
cacttctatttgttttgtcaggtggaagcaaaagatacgttaactcgctttttgaacgac
ggacttccattggagtcggagctattgggtagtcctgtattgatggagtggataaaagcc
cagaatttggattggaggcggcagaaacaagatctcgtggatgttctgtcgttttcattc
ctttcgcgcagaattgtgacgaacccgtcttattatgactgcccacctgaaggcaagaat
ccgaatttatcacgcatcgtagatagactgctggagacggcacctcagcctgaggtacaa
catggaggatga
DBGET
integrated database retrieval system
