Agaricus bisporus var. bisporus H97: AGABI2DRAFT203365
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Entry
AGABI2DRAFT203365 CDS
T03140
Symbol
AGABI2DRAFT_203365
Name
(RefSeq) hypothetical protein
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
abv
Agaricus bisporus var. bisporus H97
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
abv03009
]
AGABI2DRAFT203365 (AGABI2DRAFT_203365)
Enzymes [BR:
abv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AGABI2DRAFT203365 (AGABI2DRAFT_203365)
Ribosome biogenesis [BR:
abv03009
]
Eukaryotic type
Pre-60S particles
Helicases
AGABI2DRAFT203365 (AGABI2DRAFT_203365)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
18084011
NCBI-ProteinID:
XP_006460355
JGI:
Agabi_varbisH97_2_203365
LinkDB
All DBs
Position
Unknown
AA seq
664 aa
AA seq
DB search
MAATTAFAGSWSSLQSPLTPWILDVIQSMGYQQMTPVQASTIPLFMKNKDVVVEAVTGSG
KTLAFVVPILERLIRRETRLRRNEVGALVISPTRELASQIHSVFSLFLHSQPCQEESNEG
SQESQSQQFKLQYPSPLLLVSSSQSTPAQDIERFLSSGADIVIGTPGRVEEFLLRRGRNT
VSVKEFEVLVLDEADRLLDLGFQDILGRIITHLPKQRRTGLFSATMTDADAMTELVRAGL
RNPARVIVKVQAKRAKGESIIEERRIPAHLQNFFISCYASEKLLQLSRLISFEACQNKSS
KFIVYFATCACVDYFCKILPSVSTSATFFSLHGHLPPSARTKTLNNFASAASTPTNPSVL
LATDVAARGLDLPNVDVVIQFDPPSDPKAFSHRCGRTARAGRSGRAYVLLVGREIEFVEF
MSIRKIPLKQHAFIQQDLSLSSEDDTERRTDQEVDQSLSLVRTKVLSDRVYNDQAMKAFV
SFVRAYCKHEASYIFRIKDLDLVGVARSFGLLRLPRMPELQNVDKSGWADATVDWDTYAY
TDKAQELKRLATKEAEKEIREKDQKQHIVRAKKRKANAAWSEQTERKDEREKRREKRVKK
RKWLKDQQQCASTVTSENVSSEMKTMDVSDEDDWDDLAKEESMAKKLRKGKISQQDFDTA
FADL
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggcagccacaacggcgtttgctggctcttggtcctctcttcagtcacccttgacacca
tggattttagatgtgattcaatctatgggatatcagcaaatgacgcctgtccaagcgtcc
accattcccttattcatgaagaacaaggatgtggttgttgaggctgtcaccggctcaggt
aaaacactggcatttgttgttccgatattggagcgcctcattcgcagagaaactcgttta
cgaaggaacgaagtgggagcactggtcataagccccaccagagaattggcgtcacaaatt
cattccgtattttcgctttttctccactcccagccgtgtcaggaagaatccaatgagggg
tctcaagaaagtcaatcccagcaatttaagcttcaatacccgtctcctttactgctcgtg
tcctcgagtcaatcaacccctgcgcaagatatcgagagattcctgtccagtggtgcggat
attgtcataggcactcctggtcgtgtggaggaatttttactgagaagggggagaaatact
gtgagcgtaaaggaattcgaagttttggtacttgatgaagcggatcgtctactagatctg
ggattccaagatatattgggacggattattacccaccttccgaagcaacgaagaactggt
ctctttagtgcaacaatgacggatgccgatgccatgactgaattagttcgcgctggtctg
cgaaaccctgctcgtgtgatagtgaaggtacaggcgaaaagggctaaaggagagtccata
atcgaggaaaggcgcatacccgctcacctacagaacttttttatatcatgttatgcttca
gaaaagcttcttcaattgtcccgcctaatctcattcgaagcctgccaaaacaagtcttct
aaatttattgtctactttgctacctgtgcatgcgttgattatttctgcaagatcttacct
agtgtatcaacatcagctacattcttttcccttcatggtcatttacccccttcggcacgg
acaaaaactctcaacaattttgcttctgcagcttctaccccgactaatccttccgttctt
ctggcgacagatgttgctgctcgcggtcttgatctacctaacgttgatgttgtgattcaa
ttcgaccctccttccgatccaaaagccttctctcatcgttgtgggagaacggcccgtgct
gggcgtagtggacgagcatatgtcctacttgttggtcgagaaatagagtttgttgaattt
atgagtatacgaaaaattccgttaaagcaacatgcatttatacagcaggacctttctctt
tcgagtgaagacgacacagaacggcggactgaccaggaagttgaccagtctctttctctt
gtgcggacgaaggtcctatcagatcgtgtctacaacgatcaggcgatgaaagccttcgtc
tctttcgttcgtgcatattgtaaacacgaagcatcctatatatttcgcatcaaagaccta
gaccttgttggtgttgcaaggagtttcgggcttctccgattgccacgaatgcctgagctg
caaaatgtagataagagtgggtgggctgatgccactgtcgattgggatacctatgcatac
acggacaaggcgcaggagttgaaacgtctggcaactaaagaggcagaaaaggagatccgc
gagaaagatcaaaaacaacatattgtgagagccaagaagagaaaagcaaatgctgcatgg
agcgagcagacggagagaaaggatgagagggaaaaacggcgtgaaaaacgtgtaaagaag
aggaagtggcttaaggaccagcaacagtgcgcaagtactgtaacgtccgagaacgtatct
tcggaaatgaaaaccatggatgttagcgacgaagatgactgggacgacctggcaaaagaa
gagagtatggcaaagaagttgcggaaagggaagatatcacaacaagatttcgacactgct
tttgctgatctctaa
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