Agaricus bisporus var. bisporus H97: AGABI2DRAFT203506
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Entry
AGABI2DRAFT203506 CDS
T03140
Symbol
AGABI2DRAFT_203506
Name
(RefSeq) hypothetical protein
KO
K10754
replication factor C subunit 1
Organism
abv
Agaricus bisporus var. bisporus H97
Pathway
abv03030
DNA replication
abv03410
Base excision repair
abv03420
Nucleotide excision repair
abv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AGABI2DRAFT203506 (AGABI2DRAFT_203506)
03410 Base excision repair
AGABI2DRAFT203506 (AGABI2DRAFT_203506)
03420 Nucleotide excision repair
AGABI2DRAFT203506 (AGABI2DRAFT_203506)
03430 Mismatch repair
AGABI2DRAFT203506 (AGABI2DRAFT_203506)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abv03032
]
AGABI2DRAFT203506 (AGABI2DRAFT_203506)
03400 DNA repair and recombination proteins [BR:
abv03400
]
AGABI2DRAFT203506 (AGABI2DRAFT_203506)
DNA replication proteins [BR:
abv03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
AGABI2DRAFT203506 (AGABI2DRAFT_203506)
DNA repair and recombination proteins [BR:
abv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
AGABI2DRAFT203506 (AGABI2DRAFT_203506)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
Rad17
nSTAND3
AAA_30
AAA_18
RuvB_N
AAA_22
AAA_16
NTPase_1
AAA_5
AAA_14
GntR
AAA_33
Motif
Other DBs
NCBI-GeneID:
18084023
NCBI-ProteinID:
XP_006460451
JGI:
Agabi_varbisH97_2_203506
LinkDB
All DBs
Position
Unknown
AA seq
728 aa
AA seq
DB search
MTNIFDSWAAIKAAKLAGPSAPGSKQVPDGAPNCLLGLSFVFTGELSSFSREEAVDLAKR
FGGRVVLQPSSKTDFVVLGDDAGPAKLAAIKKHSLKTLSEDEFLNLIATREGADEGGLDA
KTKKKLEKEQQEIRKAAKEMEKRENSSSQVQLDPSIQLWTTRYAPQSLKEICGNKGQVEK
LLQWLNDWPSSLKSGFKKPGKIGMNIFRGVLITGPPGIGKTTSAHLCAKLAGFTPIELNA
SDTRSKKLVENGMNINNTSLDGFIHGAGSTNSVGVPITGKTCLIMDEVDGMSAGDRGGVG
ALNAIIKKSKIPIICIANDRGAQKLKPLMSTTFSLNFSRPQAQMIRSRILSIIFKEGMKV
PANVVDQLIQGSQSDIRQVLNMLSTWKLSSDSMDFDESKSLVKMNEKYAIMTPFDITSKI
LGPYLFSSTARETLGDKMELYFQDHSFVPLFIQENYLKSQPARVRNMDGPEKELKHLQLM
EQASASISDGDLVDSLIHGPEQHWGLMPLHAVCSTVRPASCLYGSGVHFGGPNSMSFPQW
LGQNSKKNKLARQLADVQVRMRLKVSSDKAEIRQSYVPALFPYIVRPLVDEGAGAVDKVI
ERMDAYYLSKEDWETIVELGVGENKDVKIAAAAKSSFTRKYNGSDHPIPFHKAQDLGKMP
KKLTGGPAPDLEEAFIDDIPDDEEEDVKPKESIDDISGDKLIQAPKKRKAVGTTKAKAKA
KTKTSKKS
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgactaatatctttgatagttgggccgcaatcaaagcagcaaaactcgcggggccatct
gcaccgggatcgaaacaagtccctgatggcgcgcctaattgtttgttgggactttctttc
gtgtttaccggagaactcagcagcttttctcgagaagaggcggttgatttagcgaagcgg
ttcggagggcgcgtcgttctccagccatcgagtaagaccgattttgttgtcttgggagac
gatgccggccccgccaaattagcagcgatcaagaaacacagtctaaagaccctcagcgaa
gacgaattcttgaacctgattgcaactagggagggtgcggatgaaggtggtctcgacgcg
aaaacgaagaaaaagttggagaaagagcagcaagaaatccgtaaagctgcgaaagaaatg
gagaaacgcgaaaattcttcctctcaggttcagctcgacccttccattcaactctggacg
acacgctacgcaccccagtcacttaaagagatttgtggaaacaagggtcaggttgaaaag
ctcctccaatggctgaacgattggcccagtagtctgaaatcgggctttaagaagcccggt
aagattgggatgaacatattccgaggcgttctaatcactggaccacctggcattggtaag
actaccagtgcccatctgtgcgctaaactagctgggttcactcccatcgagcttaacgcc
agtgatacgcggagcaagaaactcgtcgaaaacgggatgaacataaacaatacgtcgtta
gatggttttatccatggcgcagggtccacgaattctgttggtgtccctatcactggtaaa
acttgtcttatcatggacgaggtcgatggtatgtcggctggcgatcgcggtggtgtaggg
gcgcttaatgcgatcatcaagaagagcaagattccgattatttgtatcgctaatgatcgt
ggagcacaaaagctcaagcctctcatgtcaaccacgtttagtctgaacttctcaagaccg
caagctcaaatgatcaggtcacgaatcttatccatcattttcaaagaggggatgaaagtt
ccagcgaacgttgtagatcaacttattcagggctcgcaatccgacattcggcaggtgtta
aatatgctttcaacatggaagttgtccagcgatagtatggattttgatgaaagtaaatca
ctcgtcaagatgaacgaaaaatatgcaatcatgactccttttgatatcacctcgaaaatc
cttggaccatacctcttctcttccacagctagggagactcttggcgacaagatggaactg
tatttccaggatcattctttcgttccgctttttattcaggagaattatttgaaaagtcaa
cccgcgagagtacggaatatggacgggcctgagaaggagttaaagcatcttcaactcatg
gagcaggcatcggcgtcaatctctgatggtgatcttgttgatagccttattcatgggcct
gaacagcattggggtcttatgcctctgcacgctgtatgttcaactgttcgaccggcgtca
tgtttgtatggttctggagtccactttggtggtcctaattcgatgtcattcccccagtgg
cttggtcagaattccaaaaaaaacaagctcgcgcgtcaactagctgacgtgcaagtacgt
atgaggttgaaagtatccagtgacaaggccgaaattcgacagtcatacgttccagcattg
tttccttatattgtgagacctttggtggatgagggcgcgggcgctgtggacaaagtgatt
gaacgtatggatgcgtactacctgtcaaaagaggattgggaaacaatagtagagctggga
gtgggtgagaataaagacgtcaaaatagcggctgcggcgaagagctcgttcactaggaag
tataatggttctgatcatcctattccattccacaaggcgcaggatctcgggaaaatgccg
aagaaacttactggaggtcctgctcccgaccttgaggaggcatttatcgatgacattccg
gatgatgaagaggaagacgtcaaaccaaaggagtcgattgatgatatatccggtgataag
ctcattcaagcacctaaaaagaggaaggcagtgggtacgacaaaggcaaaggcgaaggcg
aagacaaagacctcgaagaaatcgtga
DBGET
integrated database retrieval system
