Agaricus bisporus var. bisporus H97: AGABI2DRAFT205664
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Entry
AGABI2DRAFT205664 CDS
T03140
Symbol
AGABI2DRAFT_205664
Name
(RefSeq) hypothetical protein
KO
K12821
pre-mRNA-processing factor 40
Organism
abv
Agaricus bisporus var. bisporus H97
Pathway
abv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AGABI2DRAFT205664 (AGABI2DRAFT_205664)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
abv03041
]
AGABI2DRAFT205664 (AGABI2DRAFT_205664)
Spliceosome [BR:
abv03041
]
Complex A
U1 snRNP components
U1 related factors
AGABI2DRAFT205664 (AGABI2DRAFT_205664)
Complex B
AGABI2DRAFT205664 (AGABI2DRAFT_205664)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
Motif
Other DBs
NCBI-GeneID:
18084182
NCBI-ProteinID:
XP_006461780
JGI:
Agabi_varbisH97_2_205664
LinkDB
All DBs
Position
Unknown
AA seq
825 aa
AA seq
DB search
MNIWTEHRNPEGRTYWFNTGTKQSVWEKPDELKSQFERALSKTKWKEYFSNGRKYYYNTE
TKESKWEMPDDVIVYLDQVQEELKTSTPGQPAAGQPRAITAPGFTPVGGATQGALVPMGG
ADISSSTPSSQSQQANGTSNAGTPSLAVGPHTGNNGLPLAANSVLPARPHLPDDPVIPHN
GFATVEEGEKAFIHLLRKAGVDANWTWDQTMRAIITDPLYKALNTLAEKKSCWEKYTNGL
RAKEQEEKEARLAKLRPALRNMLKGNPNVFHYTTFRTADKLFAQHPIWQQARIEAERKLI
FEEYVTELKQREMQESRGSRTRSVAKVVALFKELNVDVVTRWKTAHSMVMDSDEYKMDSE
LQKLPTLDILLAFEDYSRVREREYEEQTRRAQVEKTRKERKAREAYKALLQELIDNEKIK
ARTKWKEVYPIFKDDDRYLNMLGNPGSNPLELFWDAVDTLDQKLHAKIVVVEEALRQWSP
PGSEAEKPKPEGDGDVKMGDTESGFVVSVDTKEEEFLKVVDAHATESLKQLSENDLHAVF
NALKDVALKKQADEQRRAERKQRHLQDDLRYAMRKLAEPLDITLSYEEAVPLIEHLPEYK
ALEDEEGRRAAFSKFVKRQKERMREAASEDGASTTSRKRKEPHKEHKEEREGKEKNRDHD
RDRERDREREKEKEKEKEKDRDYRERDRDRDRKDYDRRGSRHHRYDDYDDRRARNYARDR
DREDRDRDGYRPSRHRDEDRRRDSGRKASRTDYYSRDWDATPKKERDRSTSVYQEEPAKE
KREWDGDSHAERVEKRPRIDREEGPNENMDVDKSARAESPEEGEI
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgaatatctggactgaacatcgcaatcctgaaggacgcacatattggttcaacactggc
acgaaacagagcgtttgggaaaaacctgacgagctcaagtcgcaattcgagcgtgcgctt
agtaaaaccaaatggaaggaatatttttccaacggaagaaaatactattacaacaccgaa
accaaggaatcaaaatgggaaatgcctgacgatgttatagtgtacctcgaccaagtgcaa
gaagagttgaaaactagtactcctgggcaaccagctgcaggtcaacctcgagctattacc
gctccaggattcacaccagtcggaggagcaactcaaggtgcactcgtccccatgggaggc
gctgacatatcctcatctactccctcatcccagtcccaacaagccaacggcactagtaat
gctggaacaccttcccttgcggtcggtccccacacaggtaacaacggtctaccgctcgct
gcgaattctgttttgccagcgcggcctcacttgccggatgaccccgtcattccacacaac
gggttcgctactgtggaagagggcgagaaagcatttattcatttgttgagaaaggcagga
gtggatgccaattggacgtgggatcaaacgatgcgtgccattattactgatccgttgtac
aaggctctgaataccctcgctgagaagaaaagttgttgggaaaagtatacaaacggtttg
agggcgaaggagcaggaagaaaaagaagctagacttgctaagctacgccccgctctccgg
aacatgctgaaaggcaatccgaacgtttttcattatacgacatttcgtactgcagacaag
ctctttgcacagcatcccatatggcaacaagctcgcattgaagccgaaagaaaactcata
tttgaggagtatgtcacggaattaaaacaacgcgaaatgcaagaatctcgtggatcgcgc
acgcgtagtgtggccaaggtggtggcgctgtttaaagagctgaatgtcgacgttgtcact
cgctggaaaactgcgcatagtatggtcatggattctgatgaatacaagatggactctgaa
ttgcagaaattacctaccttggatatcttgttggcgtttgaagactatagtcgagtaagg
gagagggagtacgaagaacagacaaggagggcacaggtagaaaaaaccagaaaagagagg
aaggctagagaagcgtacaaggcacttttgcaagagcttattgacaacgagaaaatcaaa
gcgagaacaaagtggaaagaagtatatcccatcttcaaggatgatgatcggtatctcaac
atgcttggcaatcctggttctaacccgctggaattgttctgggatgctgttgatacgctt
gaccagaaattgcatgctaagattgttgttgttgaagaagctttgcgtcaatggagccct
cctggatctgaagctgaaaaaccaaagcccgagggtgatggcgatgtgaagatgggtgat
acagagagcgggtttgtggtgtcagtcgacactaaagaagaagaatttttgaaggtcgtt
gacgctcatgctacagaatctttgaagcagttgagcgaaaatgatttgcatgcggttttc
aatgctctcaaggatgttgcactgaaaaagcaagcggatgaacagagacgagcggaaagg
aaacaaagacatctacaagatgatctaaggtatgcgatgaggaagcttgctgaaccactt
gatatcactctttcctacgaggaggcagttcctttgattgagcatctgccagagtataaa
gctcttgaagacgaggaagggcgtcgcgctgcattttccaaattcgtcaagcgacaaaag
gaacgtatgcgtgaagctgcctcggaagatggcgcgtcgacgacgagtagaaagagaaag
gaacctcacaaagaacataaagaggagcgagaggggaaggaaaagaacagagaccacgat
agggaccgggagcgtgatagggagagggaaaaagagaaagagaaagaaaaagaaaaggat
cgagattaccgtgagcgagacagggatagagacagaaaggattatgaccgacgaggctcg
aggcatcaccggtatgatgattacgatgatcggagagctaggaactatgcaagggatcga
gatcgagaggaccgggatagggatggctacaggccttctcgtcacagggacgaagacagg
aggcgcgacagtggacgtaaagcttcgcgaacggattattactcaagagactgggatgcg
actcccaagaaggaacgagataggagcacgtctgtgtaccaggaggagcctgccaaagaa
aagagagaatgggacggagacagtcacgccgaaagggttgaaaagcggcctcggattgat
cgtgaagagggacctaacgaaaacatggacgttgataagtctgcgcgtgctgagagccct
gaggaaggcgagatttga
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integrated database retrieval system