Agaricus bisporus var. bisporus H97: AGABI2DRAFT207176
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Entry
AGABI2DRAFT207176 CDS
T03140
Symbol
AGABI2DRAFT_207176
Name
(RefSeq) hypothetical protein
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
abv
Agaricus bisporus var. bisporus H97
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
abv03009
]
AGABI2DRAFT207176 (AGABI2DRAFT_207176)
Enzymes [BR:
abv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AGABI2DRAFT207176 (AGABI2DRAFT_207176)
Ribosome biogenesis [BR:
abv03009
]
Eukaryotic type
90S particles
Helicases
AGABI2DRAFT207176 (AGABI2DRAFT_207176)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
ResIII
SUIM_assoc
nSTAND3
ATPase
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
18084291
NCBI-ProteinID:
XP_006462663
JGI:
Agabi_varbisH97_2_207176
LinkDB
All DBs
Position
Unknown
AA seq
1133 aa
AA seq
DB search
MEMDEDLQVKQILRGRSGKRKRGISGIIDVVNGDSDSESEDKGLSGSDTGFDECRSMPPI
PSARAEKIDKPQNIDGRPLITTPVTVGSALRRNEDGTVIVPTVKIRSERTGIGKWKNSLR
SNTQNNGSDASFNSSDSAYDSLSEHEEDKNSSLGENQDSLDEHEADENADEEDTSSDEAE
DSDDGGPGLGESNRIKPKEQHQKKSNFKEWATKQLSIAKGYVLSPPISRKEIPTSESTIE
RPAKRRKVIDVDKMRGPLGEEYALPESTFARRVLQNASLQTDTKAYVKSTTVKRPFDVQE
ARLMLPVVTEEQPIMEAIMLNPVVIICGETGSGKTTQVPQFLHEAGFGNSDGDNPGMIGI
TQPRRVAAISMAKRVGYELSLTSSQVSHQIRYDATVSSSTSIKFMTDGVLLRELATDFLL
SKYSVIIIDEAHERSINTDILIGVLSRVIKLREEMWKEGKEGTKPLRLVIMSATLRISDF
SENKSLFSVSPPTVNIAVRQHPVTVHFSRRTPADYVTEAIKKASKIHTRLPPGGILIFLT
GQNEITGVCRRLEERYGRKALKRKQKDRLNRTSSGEQKFRQSDERTHKLILNPTQADVEA
EDIDNDVEDFAPVDENFDGDAAEEYRDDLESEGDEDLDNELGIDTEVPMHIVPLYSLLSS
EKQMDVFNPPPPDSRLVVVATNVAETSVTIPGIKYVVDCGRMKERRYDVANGIHAFQITW
ISKASAAQRAGRAGRTGPGHCYRLYSSALFEHYFQQFNPPEILRVPVDAIVLQMKNMHID
AVVNFPFPTPPDRFALQKAEKVLTHLGALKKSSTLISQLEPVSGQITDLGRTMALFPLSP
RYSRMLAAGQQHQCLPYVIAIVSAMSVGDPFLHEEVVQVEDDGQISSETEDVAQLSGGQG
MVTERKRLRRKAYFEVQREHASLGEFTSDSLKILSVVGAYEYHGGAGTFCSDHFVRLKAM
EEIHKLRVQLTNIVQMYFPTTNVQFTSKLPPPNKIQIKVLKQLICAAFIDQVAVRKDLVS
HHDPSSGSQYSNSHGVPYRAVGISEDVFLHPSSVLWNLPPPNYIVFQEVVRTTRVFVKGL
TAVNPAWLSSLSRATPLCTYSKPFRGANDVLMVIPRYGPDGWELPAVKAEGHL
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggatgaagacctacaggtcaaacaaattttgcgaggtcgaagtggaaagaga
aagcgtggcatttctggaattatcgatgtggtaaatggcgactcagattcggagagtgag
gacaagggattgagcgggtcagatacgggcttcgatgaatgtcgatctatgccaccaata
ccctccgccagagccgaaaaaatagacaaaccacagaatatagatggccgtccgctcata
acgacacccgtgactgtcggaagtgctctacggagaaatgaggatggcactgtaatagtg
ccaaccgtgaagattcggtcggaaaggactggaattgggaaatggaagaactcacttcga
tcaaatactcaaaataatggctctgacgcgtcatttaatagttctgattctgcgtatgac
tcgctgtcagaacatgaggaagacaaaaacagctcactaggagaaaaccaagacagccta
gatgagcacgaggcagacgagaatgcagatgaggaggatacgagtagcgatgaagcagag
gacagcgatgatggcggtcctggtttaggggaaagtaaccgaataaaacccaaggagcaa
caccagaaaaaaagcaatttcaaggagtgggcgacaaaacaactttcaatagcgaaggga
tatgttttgagtcctccaatttcgcgcaaagaaattcctacatcagagtccacaatagag
cgtccggcaaaacgaaggaaggtgattgatgtcgacaaaatgcgaggtcctcttggtgaa
gaatatgcgctgcccgaaagcacatttgcccgacgtgtacttcaaaatgcgagcttacaa
actgatacgaaagcctatgtcaagagtacgaccgtcaaacgcccttttgacgtccaggag
gctcgccttatgctccctgtggtgacagaggagcagcctatcatggaagctatcatgcta
aatccagtcgttatcatctgcggtgaaactggtagcgggaagacaacacaagtaccccaa
ttcctgcatgaagctggctttggcaatagcgatggtgataatcccggaatgattggcatc
actcaaccacgtcgggttgctgctatttccatggctaaacgagttggatacgaactatcg
ctaacttcatcacaagtctcgcatcaaattcgctacgatgccacagtgtcttcatccacc
tccatcaaattcatgactgatggtgtgctcttacgagagctggccactgattttttactg
agcaaatactcagtcataatcattgacgaggcccatgagagaagtatcaacactgacatt
ctcattggagtgttgagtcgtgtcatcaagctgcgagaagagatgtggaaagaaggcaaa
gaaggcacgaagcctttacgtttggtcatcatgtctgcaacacttcgtatcagtgatttt
tccgaaaacaagagtttattctcagtgtctccccctactgttaatattgctgtccgtcag
catcccgtaactgtccatttcagccgtcgaacgcctgcagactatgttaccgaggctata
aaaaaggcctccaagattcatacccgtctaccgccaggggggattctgatattcttaacg
ggccaaaatgaaattaccggagtttgcaggcgacttgaggagcggtatggacgaaaggct
ctcaaacgcaagcaaaaggaccgtctcaaccgaacatcaagtggagaacaaaagtttcgc
caatcagatgaaagaacacataagttaatattgaatcccactcaagccgacgttgaggca
gaagacattgataacgacgttgaggactttgcacctgtggacgaaaacttcgatggagac
gcggccgaggaatacagagatgacctagaaagtgaaggcgatgaagacctggacaatgag
ctgggtattgacacagaagttcctatgcacattgtgcccctttactctctcttgtcaagc
gagaaacagatggacgttttcaatcctccgccacccgattctcgcttggttgttgtggct
accaatgttgctgaaacttctgtcacaattcccgggatcaagtatgttgttgattgtggg
aggatgaaagaacgcagatatgatgttgcgaatgggattcacgcattccaaataacctgg
atatcaaaggcatcggctgctcaaagagcaggtagagcaggtcggactggcccaggtcac
tgttaccgactctactcttctgccctctttgaacattactttcaacaattcaatcctccc
gaaattcttcgagtcccagttgacgccattgttttgcagatgaagaatatgcatatagat
gccgttgtcaatttccccttccccactcctccagatcgttttgccctccaaaaagcagaa
aaagtgcttacacacctcggagctctgaagaagtcaagtaccttgatctcgcagttagag
ccagtaagtggccagatcactgatctcggaagaaccatggcattgtttcccttatctccc
cgatactcgcgaatgttagcggccggccagcaacatcagtgtctcccctacgttatcgca
attgtttctgctatgtctgttggggatccattcctacacgaagaagttgttcaagttgag
gatgacggtcaaatttcttccgagaccgaggatgttgcgcagctctctggcgggcaaggg
atggtaacagaaaggaaacggttacggcggaaggcatatttcgaagttcagcgagagcat
gcatcgctcggagaatttacgagtgatagcttgaagatactgtcagttgttggtgcttat
gagtatcacggaggggctggtacattttgttctgatcacttcgtcaggctgaaggccatg
gaggagatacacaaacttcgggtgcagcttactaacatagtgcaaatgtatttcccaact
acaaacgttcaattcacgtccaagctaccaccgcctaataaaattcagatcaaagtcctg
aaacagctcatatgcgcggccttcatagatcaagtcgctgttcgcaaagatcttgtcagc
caccatgacccttcaagcggttcacagtacagtaatagtcatggtgtaccctatcgagct
gttggaatctctgaggacgttttccttcatccatcgtcggtcttgtggaatctgccacca
ccaaattatatcgtcttccaggaggtcgtcagaacgacgcgagtatttgtcaaaggctta
acggccgttaatcctgcttggttgtcctctctttcgagggccacacctctttgcacatac
tccaagccattcagaggagctaatgacgtgcttatggtgatacctcggtatggtccggat
ggctgggaattgcctgcagtgaaagcagaagggcatctataa
DBGET
integrated database retrieval system
