Agaricus bisporus var. bisporus H97: AGABI2DRAFT207943
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Entry
AGABI2DRAFT207943 CDS
T03140
Symbol
AGABI2DRAFT_207943
Name
(RefSeq) hypothetical protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
abv
Agaricus bisporus var. bisporus H97
Pathway
abv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AGABI2DRAFT207943 (AGABI2DRAFT_207943)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abv03400
]
AGABI2DRAFT207943 (AGABI2DRAFT_207943)
DNA repair and recombination proteins [BR:
abv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
AGABI2DRAFT207943 (AGABI2DRAFT_207943)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
ABC_tran
AAA_29
Motif
Other DBs
NCBI-GeneID:
18084347
NCBI-ProteinID:
XP_006463252
JGI:
Agabi_varbisH97_2_207943
LinkDB
All DBs
Position
Unknown
AA seq
1263 aa
AA seq
DB search
MASKDKGKDTLKQKSLTSFFSKAPVVSSNSHSKPNATRKDKFTVNAKSNIDGDASSNPNE
PCTPETKALNKRILVSSVAASSASSRAGSTPPTSDPIDVDMVSERGEDTESPAHTRSVQV
RKKRKIVADSDEESRPSHTKRIVSNSSPIPAKGHSKRQRLALATSEGDDDDEGDYVTNTF
SQRLTRFKKSPVKKGKKSRASDDDDFIVPDEEGDDSEAETKSIRSSSGHSSMSSRRSVSS
DGDLTEDQDDDKAKQIKSKKKPGKPSKGLEGASRGGSSSFLTAAEQREQGKKNDKKAAED
PYAFLQDVKDKDGKRPGEPGYDPRTLHIPSSAWKEFTPFEKQFWEIKQNHYDTVLFFQKG
KFFELYEDDARIGHQEFDLKLTSRVKMSMVGVPEMSLDFWTAKFLGKGYKVGRVDQSETA
LGAEMRNKSKGKASEDKAKDKIVRRRELNKVYTNGTLVDPELLIDDNAGHCVAITEEPSE
DGKDLQNKFGICVLDCSTSQFNLSAFEDDVCRTKLETLMRQIRPKELLFKKGSLSVSTTR
MLKMILPTNVLWTSLRTVEGFDYDQTMEQLKTLFPPGDEDMEADGDDALPASVPESIREM
ASYPKAIESLGCMIWYLRQLNIDKEIISMKNFNVYDPMKRGQGLTLEGQSLAHLEILINN
EGTEDGSLLKLLNRCITSFGKRLFRIWLCMPLRNVVDINARLDAVEDIMNHPTFEADFVE
IAKGLPDLERIVSRIHANNCKIKDFLKVLASFRKLSRGLNKLADESEGFKSKTILGLLRG
APNLIPHVKHIEEMFQRPDPSGKASDELLPQKGKDEEYDAIVAEINGVEGKLEEALSELE
DHVGFKLTYWHSATGHKDIYLVETTVAKKAPSTWTKHSGTKAKNRYVVPSLQSKIRQLKE
ARENRTTAIKSFKSRLFAEFDQDRSVWLRSIRVFAELDCLFSLAKSSTVIGSPSCRPEFV
ENAHGSTFVDFEELRHPILCLNTNLKNFIANDVKLGGDVGKVALLTGPNMAGKSTLMRMT
AIGVIMAQLGMFVPASKARLSPVDSIITRMGAYDNMFAHASTFKVELDECSKILREATPR
SLVILDELGRGTSTFDGMAIAGAVLHQLATHTLPLTFFATHYGSLTDDFAQHPNIRNMHM
STLVDDEKKELVFLYKLIDGVAESSFGTHVANLAGVPFEVVERADIVSKQFAKQFKEKLE
LKQKQNASALVPLNIQADWVYLVKLACGEVKVNDEGRGREVLDRLRGVFKNFLEHKKKVK
TSD
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaaaagacaagggcaaagatacactgaaacaaaaaagcttgacatctttcttc
tcaaaggcaccagtcgtctcttctaattctcactcaaaaccaaatgctacgcgtaaagat
aaatttaccgtcaatgctaaatccaatatcgacggagacgcgtctagtaatcctaatgaa
ccttgtactccagaaaccaaagcacttaacaaacgaattcttgtatcttctgtagctgcc
agttctgcttcttcccgtgctggtagtacacctccgacaagtgacccgattgatgtggat
atggtttctgaaagaggcgaagatacggagagtccagcacatactaggagtgtgcaggtc
cgtaaaaaacgaaagatcgtagcagattcggacgaagagtctagaccctcccatacaaag
cgcattgtatcgaattcttcaccgatacccgcaaaaggccatagcaaacgacagcgcctt
gctctagcgacaagtgaaggtgacgacgatgacgagggagactatgtgacaaatacgttt
tctcaaaggttgacacgtttcaagaagtctccggtcaagaagggcaaaaagtcgcgtgct
tcggatgatgatgatttcatcgttcctgatgaggaaggtgacgactccgaagcagaaacg
aagtctataagatcttcatctggccactcttctatgtcatcccggcgttctgtcagctct
gatggtgatttaaccgaagatcaagatgatgacaaagcgaaacaaataaagtctaaaaag
aaacccggaaaaccctccaaaggattggaaggagcttcgaggggaggaagttctagtttc
cttacagcggctgagcaacgagaacaaggcaagaagaatgacaagaaagctgcggaagat
ccctacgcgtttcttcaagacgtcaaagacaaagatggaaaacggcctggagaacctggt
tatgacccgaggacactgcacattccatcctcagcttggaaagaatttacaccatttgaa
aaacagttttgggagataaaacagaatcattacgacactgtcctgttcttccagaaagga
aagttctttgagctctatgaagacgatgcacgtattggtcatcaagaattcgatttgaaa
ctaacctctcgtgtcaaaatgtcgatggtcggcgtgccagaaatgtcgttggatttctgg
actgcaaagtttttaggaaaaggctacaaggttggtcgagtggatcaatctgaaacagcg
cttggtgcggaaatgcggaataagtccaagggcaaggctagcgaagataaggccaaagat
aagatcgtcagacgcagggagctgaacaaagtatataccaacggtactctcgtcgatccg
gagctactaatcgacgataatgctggccattgtgttgctatcaccgaagagccctcggaa
gatggaaaagacctgcagaacaagtttggcatttgtgttttggattgttcaacctcgcaa
ttcaatctaagtgcattcgaggatgacgtctgtcgcactaagctcgagactctcatgcgc
caaatccgaccgaaggagcttttgttcaaaaagggatcgctttctgtttcgactactcgc
atgctcaagatgattctacccaccaatgttctgtggaccagtttacggacggttgaaggc
tttgattatgaccaaacgatggagcaactcaaaacactctttccaccaggagatgaagac
atggaagctgatggcgatgatgctcttccagcatctgtgccggagtctatccgtgaaatg
gcgtcatacccgaaggcaattgaatcactaggctgcatgatttggtatttacgtcaattg
aacattgataaggaaatcattagcatgaagaatttcaacgtgtatgaccctatgaagcgt
ggtcaggggttaacgctcgaaggccagagtttggcccatcttgagatactgatcaacaac
gagggaacagaagatggatccttgctcaaactcttaaatcggtgtataacgtcctttggc
aaacgactattccgcatttggttgtgcatgcctttgcgtaacgttgttgatatcaacgcg
aggcttgatgccgtagaagacatcatgaaccatcctacatttgaggctgactttgttgag
attgccaagggtttgcccgatctcgagagaattgtttcaaggatacacgcgaataattgc
aagatcaaggattttttgaaagtacttgcttcattcaggaagttgagtcgtggattgaac
aaattggcagatgaatcggagggtttcaagtctaaaacgatcctgggattattacgtggt
gctcctaacctcataccccatgtgaagcacattgaggaaatgttccagagaccagatccg
agcggcaaagcttcagatgagctgttaccgcagaagggtaaagatgaagagtatgatgca
atcgtggccgagatcaacggggttgaaggaaagttggaggaagcccttagtgagcttgag
gatcacgtggggttcaagcttacctactggcatagtgcgaccggtcacaaggatatctac
ttggttgagactacggtggcaaagaaggctccttcgacttggactaagcatagtggtacc
aaggccaaaaatcgctatgttgtcccctcgcttcagtcaaaaattcgccaactgaaagaa
gcccgtgaaaaccggacaacagccatcaaaagcttcaaatctcgactttttgctgaattt
gatcaggaccgcagtgtatggcttcgctcaatccgcgtctttgccgaactcgactgtttg
ttctctttggccaaatcctcaacggttattgggtcaccatcgtgtagacctgagtttgtg
gaaaatgctcatggatccacgtttgttgatttcgaagaactgaggcatcccattttgtgt
ttgaatactaatttgaagaattttatcgcgaatgatgtgaaacttggtggggatgtcggg
aaggtggctttgttgacggggccgaatatggctgggaaatccacgctcatgcgaatgact
gcaattggcgtaatcatggcgcaacttggaatgttcgtccccgcttccaaagcaaggttg
agcccagtggactctattataacccgcatgggtgcctacgacaacatgttcgctcatgct
agcacattcaaggttgaactcgatgaatgttctaagattttgcgggaggcaacgcctaga
tcacttgtgatacttgatgagctaggcaggggaacttctaccttcgacggcatggcgatt
gcgggagcggtattgcaccaacttgccacccatacattaccgttaacgttctttgcgact
cattatggttcgcttaccgatgattttgctcaacatcctaacatccgaaatatgcacatg
tcgacattagttgatgatgagaaaaaagagctcgtattcttgtataaactcatcgacggc
gttgcggaatcctcgtttggaacgcatgtggccaatcttgctggcgttcctttcgaagtc
gtcgaaagagccgatattgtctctaaacaatttgctaaacaattcaaggaaaaattggag
ttgaagcaaaagcaaaatgcgtcggcgctggtaccattgaatatacaagctgattgggtc
tatcttgtcaagcttgcttgtggagaggtcaaagtgaatgatgagggtagggggagagag
gtactggataggctcaggggcgttttcaaaaactttttggagcataagaaaaaggtgaag
acgagcgattag
DBGET
integrated database retrieval system