Agaricus bisporus var. bisporus H97: AGABI2DRAFT208287
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Entry
AGABI2DRAFT208287 CDS
T03140
Symbol
AGABI2DRAFT_208287
Name
(RefSeq) hypothetical protein
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
abv
Agaricus bisporus var. bisporus H97
Pathway
abv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AGABI2DRAFT208287 (AGABI2DRAFT_208287)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abv03021
]
AGABI2DRAFT208287 (AGABI2DRAFT_208287)
Transcription machinery [BR:
abv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
AGABI2DRAFT208287 (AGABI2DRAFT_208287)
Prokaryotic type
Archaeal type
TFE
AGABI2DRAFT208287 (AGABI2DRAFT_208287)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Motif
Other DBs
NCBI-GeneID:
18084373
NCBI-ProteinID:
XP_006463473
JGI:
Agabi_varbisH97_2_208287
LinkDB
All DBs
Position
Unknown
AA seq
534 aa
AA seq
DB search
MANKEDQETLRLLVQHVARAFYEPKYIIILDQLARHAVLKDDDLAGRMGLQPKELNKVIA
VLSTDCLVKVYRQNELKEGAQRSVGRQYYYIDYQYFCNVVKWRVAKMMQIIDSSLRNELD
NKGYVCTLCKQSYSPLDVDKLMDFSRGIMVCEICHAEVVDNENAESVQGSKDRMKRFHHQ
LRFIKEGLQKSEAMVLPAFDVAAWVKAHVIESDKQKSSSTRGDLKIAGSDPNKKEDEGVG
IMMAMDKDEATRRQERAAEAELKRQQNALPAWHLKSTITGDLTALGIQEHARAEAAAAAA
AAAVAATGSNDDILKGLGVVGGSASLSISRTNTVVEQSLMMNGFEEEKPQIGQEEADYYE
QYYASLAASTNVSALPTPTAGGSHYSSEYGGDFDDEEEEKKPNIQYLDSLNDYRKRSRSK
EDVGSGSVAKGSKLAKLHLEGLNGTQQNGFNGNGIGVDVATATTTASSGVGTPVEDQNGY
DDMGDSYIDGAGEDDPMVYVNGKPVPYSQVTEEHHDMMTPDEYTAYFDIMQARS
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggcaaataaggaggaccaagagaccctacgtctactcgtccaacatgtcgctagagct
ttttacgagcccaagtacattatcatcctggaccaacttgcccggcatgcggttctcaag
gacgatgaccttgcgggtagaatgggtcttcagccgaaagagctgaataaagtcatcgct
gtgcttagcactgactgtcttgtcaaagtgtatagacagaatgaactgaaggaaggagca
cagcggtctgtcggcagacagtattattacatcgactaccagtacttttgcaacgtcgtc
aagtggagggtcgcaaagatgatgcaaattatcgattcttccttacggaacgaattggat
aacaaaggatacgtttgtactttatgcaaacagtcgtactcaccgcttgacgttgacaag
ttgatggatttctcgaggggtatcatggtttgtgagatatgccatgcggaggtggtggat
aatgagaatgcggagagtgtgcaagggagtaaagataggatgaaacggttccatcatcag
ttgaggtttatcaaagaagggttgcagaaaagtgaggcgatggtgttacctgcgtttgac
gttgccgcgtgggtaaaagctcatgtcatcgaatccgacaaacaaaagtcctcctccact
cgaggagatctcaaaattgcgggctcagatccaaacaaaaaggaagacgagggtgtagga
atcatgatggcgatggacaaagatgaagcaacacgtcgacaagaacgtgcggcggaagcg
gaactcaaaagacaacagaatgctttacctgcttggcatttgaaaagtacgattactgga
gatttgacggcacttggtattcaagaacatgctagagctgaagctgccgctgcggcggcg
gcggcggctgtagctgctacgggatcgaatgatgatattttgaaggggttgggtgttgtt
ggtgggagtgcgtctttgtcgatatcaagaacgaatacagttgtggagcagagtttgatg
atgaatgggtttgaagaggagaaaccgcagattgggcaggaagaagcggattactacgag
cagtattacgcctcattagcggcatcgactaacgtgtcagctctaccaacaccgacagca
ggaggttctcattattcatccgaatacggaggagatttcgatgacgaagaagaggagaaa
aaaccgaatattcaatatctcgattctttgaatgattatcggaaacggtcaaggtcgaaa
gaggatgtggggagtggttcagtggcgaagggatcgaagttggcaaagttgcatttggag
ggattgaatgggacacagcagaatgggtttaatgggaatgggataggggtggatgttgct
acagctacgacgactgcttcgagtggggtgggtacgccggttgaggatcaaaatgggtat
gatgatatgggtgattcatatattgatggtgcgggggaagacgatccaatggtgtacgtg
aacggcaaacctgtaccgtattcacaagtgacggaagaacatcacgatatgatgacaccc
gacgagtatacagcgtatttcgatatcatgcaagctagatcttga
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